Dipodomys merriami (Merriam's kangaroo rat): 138812235
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Entry
138812235 CDS
T11079
Symbol
Copa
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138812235 (Copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmer04147
]
138812235 (Copa)
Membrane trafficking [BR:
dmer04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
138812235 (Copa)
Exosome [BR:
dmer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138812235 (Copa)
Exosomal proteins of bladder cancer cells
138812235 (Copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
138812235
NCBI-ProteinID:
XP_069856380
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVNISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLDALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEAPEGLGDDSLGKGQEEGGGWDVEEDLELPPE
LDVSPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVVQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYNYPNRNWKDAGLKNSVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YFPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccctggatcttgaccagcttacataatggagtaatacagttatgggactatcgaatg
tgcaccctcattgacaagtttgatgaacatgatggtccagtgcgaggcattgacttccat
aaacagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcgacgctgtctcttcacattgcttggacacttggattatattcgtaccacattt
tttcatcatgagtatccttggattctgagtgcctcagatgatcagaccattcgagtgtgg
aactggcaatctagaacctgtgtctgtgtgttaacaggccacaatcattatgtaatgtgt
gctcagttccacccctccgaagacttggttgtatcagctagcctggaccagactgtacgc
gtttgggatatttctggtctgagaaaaaaaaacttgtctcctggtgcagtggagtcagat
gtaagaggaataaccggggttgatctgtttggaactacagatgcggtggtgaaacatgta
ctagagggtcatgatcgtggggtaaattgggctgctttccaccctactatgcctcttatt
gtatctggagcagatgaccgacaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgacacctgtcgaggtcattacaacaatgtgtcttgtgctgtcttccatcctcgc
caagaattgatccttagcaattctgaggacaaaagcattcgagtctgggatatgtctaag
cggactggtgttcagaccttccgtagggaccatgatcgtttctgggtcctagctgctcac
cccaaccttaacctcttcgcagcagggcatgatggtggcatgattgtgtttaagctagaa
cgggaacggcccgcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacgtcaactggatttcaatagctctaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccggtgtttaatatgtcttacaatccagcagaaaatgcagtcctactgtgt
acaagagctagcaatttagagaatagtacctatgatctgtataccatccccaaagatgcc
gactcccagaatcctgatgcccctgaagggaaacgatcctcaggcctgacagccgtttgg
gttgctaggaatcgatttgctgtcctggatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtgcaggtgcccaactgtgatgagatcttctatgctggc
acaggcaacctcctgcttcgagatgcagattcaatcacactctttgatgtacaacagaaa
cggactctggcatctgtgaatatatctaaggtgaaatatgtcatctggtcagcagacatg
tctcatgtagcactactagctaaacatgaacactcatgccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggacgctctgtgtaatattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggagaccatgggatcatccggactctggatttacccatctatgtcaca
cgagtgaagggcaacaatgtgtactgcctagacagggagtgccgtcctcgggtactcacc
attgatcctactgagttcaagttcaagctggctctgatcaacagaaaatatgatgaggta
ctgcacatggtgaggaatgccaaactagtaggccagtctatcattgcttatctccagaag
aagggctatcctgaagtagcattgcattttgttaaagatgaaaaaacacgctttagtctg
gccctggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaag
aactgttgggagaaactgggagaagtggccctgctacaggggaaccatcagattgtggaa
atgtgctatcagcgcaccaaaaactttgacaaactttccttcctataccttattactggc
aacctggagaaacttcgcaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgcactctacttgggtgatgtgtcagagcgagtgcgaatcctgaagaac
tgtgggcagaaatccctggcctatctcacagctgctacccatggcttagatgaagaagct
gaaagcctgaaggagacatttgatccagagaaggagacaatcccagacattgaccctaat
gccaagctgctccaaccacctgcaccgattatgccattagataccaattggcccttatta
actgtgtccaaaggattctttgaaggttctattgccagcaagggaaagggaggagcactg
gctgccgacattgacattgacaccgttggtactgagggctggggagaggatgcagaacta
cagctggatgaagatggatttgtggaggctccagaaggtttgggggatgattctcttggc
aaggggcaggaagaaggaggtggctgggatgtagaagaagatctggagcttccgcctgaa
ctggatgtatctccaggagcagctggtggggctgaagatgggttctttgtgcccccaacc
aaagggacaagtccaactcaaatctggtgcaataactcacaacttccagttgatcacatc
ctggcaggctcttttgaaacagccatgcggctccttcatgaccaggtaggagtagtacag
tttggcccctacaagcaactgttcctgcagacatatgctcgaggccgtactacctatcag
gctctgccctgcttgccctccatgtataactaccctaatcgaaattggaaggatgcaggg
ctgaagaacagtgtgccagctgtgggcctgaagcttaatgacctcatccaacggttgcag
ctgtgctatcagctcaccacagttggcaagtttgaggaggctgtagaaaagttccgttct
atcctactcagtgtgccacttcttgttgttgacaataaacaggagattgcagaggcccag
cagctcatcaccatttgccgtgaatatattgtgggtttgtcaatggagatagaaaggaag
aagctgcccaaagagactttagaacagcagaagcgcatatgtgagatggcagcctatttc
acacactcaaacctgcagcctgttcacatgatcctggtgctgcgaacagccctcaacctc
ttttttaagctcaagaacttcaagacagcagccacttttgctcgacgcctcctggaactt
gggcccaagcctgaagtggctcaacagacccgaaaaatcctgtctgcctgtgagaagaac
cctacagatgcttaccagctcaattatgacatgcacaacccctttgacatttgtgctgca
tcctatcggcccatctaccgtggaaaaccagtggagaaatgtccactcagtggggcttgc
tatttccctgagttcaagggtcaaatctgcagggtcactacagtgacagagattggtaaa
gatgtgattggtctgagaatcagtcctcttcagtttcgctaa
DBGET
integrated database retrieval system
