Dipodomys merriami (Merriam's kangaroo rat): 138812656
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Entry
138812656 CDS
T11079
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138812656 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138812656 (Cnot3)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138812656 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138812656 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
138812656
NCBI-ProteinID:
XP_069856814
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPAPATAALSTAPGNNGASSPAAPPSALGPKASP
APSHSSGTPAPYAQAVAPPTASGPNTAQPRPPSAQPSGAGGGGSAGSGGGSNSSTGGGAG
KQNGATSYSSVVADSPAEVALSSSGGNSASGQALGPPAGPHNPPPSTSKEPSAAAPTGAG
SAAPGSGNTSGAPSLLVPLPVNTPGSPTPSFSEAKTAGALLNGPPQFSTAPEVKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTERDIILSSTAAPPTSTQPPLQLSEVNIPLSLGVCP
LGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgaaagctccaaggtgagattgatcgctgcctcaagaaagtgtccgag
ggtgtggaacagtttgaagacatttggcagaagctccacaatgcagccaatgccaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacagcggctgagggac
cagatcaagacatgggtggcatccaacgagatcaaggacaagaggcagctcattgataac
cgcaagctcatcgagacgcaaatggaaaggttcaaagttgtggaacgagagaccaagacc
aaagcttatagcaaggagggcctgggcctggcacagaaggtagaccctgcccagaaggag
aaggaagaagttggccagtggctcacgaacaccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcagtacagacacggaagaagaagggcgacaag
gatcagaagcaggaccggattgagggcttaaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgtcgacgcc
atccgcaagatcaaggacgatgttgagtactatgtcgactcgtcccaggaccccgacttc
gaagagaacgagttcctctacgacgacctggaccttgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acccccacctccaccacctccagctcccccattcctcccagcccagccaactgtaccacg
gagaactctgaagatgacaagaagagaggacggtccacagatagtgaagttagccagtct
ccagccaaaaatggctccaagcctgtccacagcaaccagcacccccagtccccagccgtg
ccacctacctacccctccggccccgcacctgccaccgctgccttgagtactgcccccggc
aacaacggggcctccagccctgcagcgccgcccagtgccctgggccccaaggccagccca
gcccccagccacagctcaggcacccctgccccctatgctcaggctgtggctccgcccact
gccagtggacccaacactgcccagccccggccccccagcgcccagcccagtggagcaggt
ggtggaggcagcgctgggagtggtggtggcagcaatagcagcacgggaggtggcgctggc
aagcagaatggcgccaccagttacagctcagttgtggccgacagccctgcggaagtggcc
ctcagcagcagcgggggcaacagcgctagcggccaggccctggggcccccggcaggcccc
cacaacccacctcccagcacctccaaggagcccagtgcagcagcccccacaggcgctggg
agcgccgctccaggctcagggaacacctcgggagcacccagcctcctggtgccgctgccc
gtgaacacccctggctctcccacacccagcttcagcgaggccaagacagccggcgccctg
ctcaatggccctccgcagttcagcaccgccccggaggtcaaggcccctgaacctctgagt
tccctcaagtccatggcggaaagggcagctatcagttctggtattgaggacccagtgccc
acgttacacctgactgagcgagacatcatcctgagcagtacggccgcgccacccacctcc
acccagcctcccctgcagctgtccgaggtgaacatcccactgtccctgggtgtgtgcccc
ctggggcccgtgcccctcaccaaggagcagctctaccagcaggccatggaggaggccgcc
tggcaccacatgccccacccctctgactctgagcgcatccggcagtacctcccccggaac
ccctgcccgacgcccccctaccaccaccagatgccacccccccactcggacacggtggag
ttctaccagcgcctgtcaaccgagacgctcttcttcatcttctactatctggagggaacc
aaggcgcagtacctggcagccaaggccctgaagaagcagtcgtggcgattccacaccaag
tacatgatgtggttccagaggcacgaggagcccaagaccatcaccgacgagtttgagcag
ggcacctacatctacttcgactatgagaagtggggccagcggaagaaggaaggctttacc
ttcgagtaccgctacctggaggacagggacctccagtga
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