Dipodomys merriami (Merriam's kangaroo rat): 138812880
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Entry
138812880 CDS
T11079
Name
(RefSeq) neuronal PAS domain-containing protein 1-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138812880
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138812880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
138812880
NCBI-ProteinID:
XP_069857223
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MATPFPGSGGGEVKCGGGGGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARSRRGKE
NLEFFELARLLPLPGAISGQLDKASVVRLSVSFLRLRRFAALGAPPWGLRAVGPPAGLAP
GRRSATALVSEVFEQHLGAHILQSLDGFVFALNQDGKFLYISETVSIYLGLSQVELTGSS
VFDYIHPGDHSEVLEQLGLQARTPAPPTPPSAASSASSSSSSSLADRPEIEPRPSGARPP
ARAQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHALPPAPLAELP
LHGHMVVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDASRIRQSHLDLLD
KGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSPGEHHVLWVSHVLSHAEGGQTPLDAFQ
LPASVACENPPSPEPEPTEGAPPEDGEQATPTEDETPPVRGKRIKVEPGPKERRGSEDSA
DEEPAAPPRPEFTSVIRAGAPKLDPVRSWALAPPGDPAPALLHAGFLCTPGGIGAIRYGP
AELGLMYPHLQRLGPGPGLPDTFYPSLGLPYPGPAGARVQRKGD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccttccccgggagcggcggcggcgaggtcaagtgcgggggaggcggtggc
gccggcgtcccgtgggactttctaccggggctgatggtcaaggccccacccggaccctgc
ctgcaggcgcagcgcaaggagaagtcccgcaacgcggcgcgctcccggcgcgggaaggag
aacctggagttcttcgagctggcccggctgctgccgctgcccggcgccatctccggccag
ctggacaaggcgtcggtcgtgcgcctcagcgtcagcttcctccgcctgcgccgcttcgcc
gcgctcggagcgccgccctgggggctgcgggccgtggggccgcccgccggcctcgcccca
ggccggcggagcgccacggcgctcgtctccgaggtctttgaacaacacctgggggcgcac
atcctgcagtccttggatggcttcgtgtttgccttgaaccaggatggaaaattcctctac
atctcagaaacagtctccatatacctgggactctcacaggtggagctgacgggcagcagc
gtcttcgactacatccaccccggggaccactcggaggtgctggagcagctggggctgcag
gcccggacccccgcgccgcccaccccgccttccgccgcctcctcggcctcctcctcctcc
tcctcctcgctggccgaccggcctgagatcgagccccgcccctccggggcgcgccctcct
gcccgggcgcaggagcgttccttcttcgtccgcatgaagtccacgctcaccaagaggggc
ctgcacgtgaaggcctcggggtacaaggtcatccatgtgaccgggcggctgcgcgcccgc
gccctgggcctggtggctctgggccacgcgctgcccccagccccgctggccgagctgcct
ctccacggacacatggtggtgttccgcctcagcctgggtctcaccatcctcgcctgtgag
agcagggtgagcgaccacatggacctgggcccctccgagctggtgggccgcagctgttac
cagtttgttcatggacaggatgcaagcaggattcgccagagccacctggacctgctggac
aagggtcaggtggtgactggttattaccgctggctgcagcgagctgggggcttcgtgtgg
ctgcagtccgtggccactgtggctgggaatgggaagagcccaggggagcaccacgtgctg
tgggtcagccacgtgctcagccacgcagaaggcggccagacccctctggatgccttccag
cttccggccagtgtggcctgtgagaacccgcccagcccagagccagagcccacagagggg
gcccctccggaagacggggagcaggctacccccaccgaggacgagaccccaccggtcagg
ggcaaacgcatcaaagtggagccgggccccaaggaaaggaggggctctgaggacagcgca
gatgaggagcctgcggcccccccacgacccgagttcacgtcagtcatccgcgcgggggct
ccaaagctggacccagtgcggtcatgggccctggcgcctcccggggaccctgcacccgcc
ctcctccacgcgggcttcctgtgcacgccgggaggcattggtgccatccgctatggtccc
gccgagctgggcctcatgtacccacacctgcagaggctgggcccagggccagggctccct
gataccttctatccttccctcggcctgccctaccccgggcctgcgggggccagagtgcag
cggaagggggactaa
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