Dipodomys merriami (Merriam's kangaroo rat): 138813078
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Entry
138813078 CDS
T11079
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04517
IgSF CAM signaling
dmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138813078
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138813078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmer04812
]
138813078
Cytoskeleton proteins [BR:
dmer04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138813078
Intermediate filaments
Intermediate filament-binding proteins
138813078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
PMC2NT
DUF7854
SOS1_NGEF_PH
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
138813078
NCBI-ProteinID:
XP_069857425
LinkDB
All DBs
Position
Unknown
AA seq
2575 aa
AA seq
DB search
MAQVPGELDNMEGLPAPNNNNPAARWESPDRGWDREPMATSTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYTDLRDGFVLTRLLEVLSGEPLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFGKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTIGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDVDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALATEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQAQAARRRGELEASRRLWALLQELEEAESW
ARDKERLLEAAAGAAAGPAAGGAAGPAAAAAGGAHDLSSTARLLAQHKILQGELGGRRAL
LQQALRRGEELAAAGGGPDLGPGADAVQLAGLAERAASARRRWQRLEEAAARRERRLQEA
RALHQFGADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGSL
RRQLATLGGASGAGPLVVALQVRVVEAEQLFAEVAEVAALRRQWLRDALAVYRMFGEVHA
CELWIGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSFMSRVLDVNHTVQELVEGGH
PSSDEVRSCQDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVES
APRAGGALQWRLSGLEAALQALEPRQAALLEEASLLAERFPAQAARLHQGAQELGTEWGA
LASSAQACGEAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGSEGPLPSSLEEADALLARH
AALKEEVGQREEDYARIVAASEALLAADGAELGPGLALDEWLPHLEIGWHKLLGLWEARR
EALVQAHVYQLFLRDLCQALAVLRNQEVALSSAELPGTVESVEEAIKRHRDFLTTMELNQ
QKMQVAVQAAEGLLRQGNVYGEQAQDAVTRLLEKSQENQLRAQQWMQKLYDQLGLQHFLR
DCHELDGWIHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLIQ
EKPELAASVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQ
LQDVDPGGDLATVNSQLKKLQSMQSQVEEWYREVGELQAQTASLPLEPASKELVGERQNA
VGERLVRLLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMLTERGDGLQAVQQ
YIKKNQSLRREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQSAWGGLREAAER
RQQSLDAAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVEN
YEESIAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVSLKELGEERRVSLEQQYWLYQL
SRQVDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVD
ELIECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEE
KRRRLPRLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEA
IASREQEVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIASQIGAADKPR
DVSSVEVLMNYHQGLKTELEARVPELTACQELGRSLLLNKSPMADEIQAQLDKLGSRKEE
VSDKWDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEA
FRKAAAAWEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGG
YDRGLEPLARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEAPARAEPVSPPAAPS
DTVDAPVSPITVVEQVRPRPERQEAADRAPEELPRRRRPERQESADQPEETSRRRRSERQ
ESVEHEAAHSLTLGRYEQMERRRERRERRLERQESSEQETPTRGELVKGKATLADIVEQL
QEKEAGPGLPAAVPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREG
GEGGGSRRSRSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVL
SKGELGFYKDAKGPASGGTHGGEPLLSLHKATSEVANDYKKKKHVFKLQTQDGSEYLLQA
KDEEEMNGWLEAVAASVAEHAEIARWGQTLPTTSSTDEGNPKREAGERRASGRRK
NT seq
7728 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggttccaggggaactggacaacatggagggcttgcctgcccccaacaacaac
aaccctgcagcccgctgggagagtccagatagaggctgggaccgggagccaatggccacc
tccacagcagctgcttcactcttcgagtgctctaggatcaaggccttggcagatgaacgg
gaggccgtgcagaagaaaaccttcaccaagtgggtgaattcccacctcgcccgcgtgggc
tgccacatcggggacctctacaccgacctgcgggacggcttcgtgctcaccaggctcctg
gaagtgctgtctggggagccgctgccgaggcccacgcggggccgcatgcggatccactca
ctggaaaatgtggacaaggccctgcagttcctcaaggagcagcgcgtgcacttggaaaac
gtgggatcgcatgacatcgtggacgggaaccaccggctgacactggggttggtctggacc
atcatcctgcgcttccagattcaagtcatcaaaatcgagaccgaggacaacagagagacg
cgctcagccaaggatgctctgcttctatggtgccagatgaaaacagctggttacccagag
gtgaacatacagaatttcaccaccagctggcgggatggcctggccttcaatgccctcatc
catcggcacaggcccgatcttgtggatttcggcaaactcaccaagtccaacgccaactac
aacctgcagagagccttccgcacagctgagcagcatctggggctggcacgtttgctggac
cctgaagatgtgaacatggaagctccggatgagaagtcaatcattacatatgtggtgtct
ttctaccactacttctccaagatgaaggccctggcggtagagggcaagcggattgggaag
gtcctggatcaggtgttggaggtgggaaaaatcatagagcgctatgaggagctggcagcc
gaattgctggcctggattcatcgcaccataggtcttatcagcaaccagaagtttgccaac
tccctgagcggggtgcagcagcagcttcaggctttcacggcctactgcacactggaaaag
cctgtcaagtttcaggagaaggggaatttggaggtgcttctcttcagcatccagagtaaa
ttgcgtgcatgcaaccgtcgcctctttgtgcctcgagaaggctgtggcatctgggatgtt
gacaaggcctggggtcagttggagaaggcagagcatgagcgggaggctgccttacgggct
gagctgatccggcaggagaagctagaactgctggcccagaggttcgaccacaaggtggcc
atgagagagagctggctgaatgagaaccagcgtctggtctcccaggacaactttgggtac
gagctgccagccgtggaagcagccatgaagaagcacgaggcaatcgaggcagacatcgca
gcctatgaggagcgggtgcagggcgtggccgaactggctcaggcattggccaccgaaggc
tattacgatgcccggcgtgtggcggctcaacgggacagtgtcttacgccagtgggctctg
ctgaccgggctggtgggtgcccggcggacccgcctggagcagaacctggctctgcagaag
gtcttccaggagatggtctacatggtggactggatggaggagatgcaggctcagctactg
tccagggagtgcggacagcatctggtggaggcggacgacctgttacagaagcacggactg
ttggagggggacatcgcggcccagagcgagcgggtagaggctctcaatgctgcggccctg
cgattctcccagctgcagggctaccagccttgcgacccgcaggtcatctgcaatcgcgtg
aaccacgtgcacggctgcctggcagagctgcaggcgcaggccgcccgacggcgcggggag
ctggaggcgtcgcggaggctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcccgggacaaggagcggctcctagaggcggcggcgggggccgcggcggggccggcggcg
gggggcgcggcggggccggcggcggcggcggcggggggcgcgcacgacctgtccagcacc
gcacgcctgctggcccagcacaagatcctgcagggcgagttgggcgggcggcgggcgctg
ctgcagcaggccctgcggcggggcgaggagctggcggcggccggcggcggccccgatctg
ggccccggcgccgacgccgtgcagctggcgggtttggcggagcgcgcggcgagcgcccgg
cgccgttggcaacgcctggaagaggcggcggcgcggcgggagcggcggctgcaggaggcg
cgggccctgcaccagttcggagccgacctggacgggctcctcgattggcttcgcgatgct
taccgtctggcagccgccggggatttcggccacgacgaagcgtccagccggcgcctggcg
cgccagcaccgcgcgctcaccggggaggtggaagcgcaccgcgggcccgtgggcagcctg
cgccgccagctggcgacgctagggggcgcgagcggcgcggggccgctggtggtggcgctg
caggtgcgcgtggtggaggccgagcagctgttcgccgaggtggccgaggtggcggcgctg
cggcgccagtggctgcgggacgcgcttgccgtgtaccgcatgttcggcgaggtgcacgcg
tgcgagctgtggatcggcgagaaggagcagtggctgctcgccatgcgcgtgcccgactcc
ctggacgacgtcgaggtggtgcagcaccgattcgagagcctagaccaggagatgaatagt
ttcatgagtcgcgtcctggatgtgaaccacacggtccaagagctcgtggaaggaggtcac
cccagttcagatgaggtgcgctcttgccaggaccacctcaacagcaggtggaaccgcatt
gtggagctggtggagcagcgcaaagaggaggtgagcgcggtgctgctggtggagaaccac
gtgctggaggtggcggaggtgcgcgcccaggtgcgggagaagcggcgggcggtggagagc
gcaccccgggccggcggcgccttgcagtggcgcctgagtggcctagaggcggctttgcaa
gcgctggagccacgccaggcggccctcctggaggaggcgtccctgctggccgagcgcttc
ccagcgcaggcggcgcggctgcaccagggcgcccaggagctggggaccgagtggggcgcc
ttggcgagctcggcccaagcctgcggcgaggcggtggcggcggccgggcggctgcagcgt
ttcctgcacgacctggatgctttcctggactggctggtgcgtgcccaggaggcagcgggg
ggcagcgaggggcccctgcccagcagcctggaagaggccgatgcactgctggcgcgccac
gctgccctcaaggaggaagtgggtcagcgcgaggaggattacgcgcgcatcgtggcggcc
agcgaggcgctgttggcggccgacggcgccgagctgggcccgggcctggctctcgatgag
tggctcccacacctggaaattggctggcacaaactgctgggcttgtgggaggcgcgccgg
gaggccctggttcaggcccacgtctatcagctcttcctgcgtgacttgtgccaggcgctc
gctgtgctgcgcaatcaggaggtggcgctgtccagcgcagagctcccaggcacggtagag
tctgtagaagaagccataaaaagacacagggattttctcaccacgatggagctgaaccag
caaaagatgcaggtggcggtgcaggctgccgagggcctgctgcggcagggcaacgtctac
ggggagcaggcccaggacgctgtgacccggctgctggagaagagccaagaaaaccaatta
agagcccagcagtggatgcagaagctatacgaccagcttggactgcagcactttctccga
gactgccatgagctggatggctggatccacgagaaaatgctgatggcgagggacggcaca
cgtgaagacggccacaagcttcacaagagatggctccggcaccaggcattcatggccgag
ctggctcagaataaggagtggctggagaagatcgagagggaaggccagcaactgattcag
gaaaagccagagctggcagcctctgtgaggaagaagctgggtgagatccggcaatgctgg
gccgagctggagagcaccacccaggccaaggcccggcagctctttgaggccagcaaagca
gaccaacttgtgcagagtttcgcagagctggataagaaacttcttcacatggaaagtcaa
ctgcaggatgtggatcctggtggggacctggccactgtcaacagccaactcaagaagctg
cagtctatgcaatctcaggtggaagaatggtaccgagaggtgggggagttgcaggcgcag
acggcctcgctgccgctggagccggcgagcaaggagctggtgggcgagcggcaaaacgcg
gtgggcgagcgcctggtgcggctgctggagccgctgcaggagcgccgccgcctgctgctt
gcctcaaaggagcttcaccaagtggcccacgatctggatgatgagctggcttgggttcag
gaacggctgcctctggccatgctgactgagcgaggggatggtttgcaggctgtccagcag
tacatcaaaaagaaccagagcctgcgtcgcgagatccaggcgcatgggccgcgtctggag
gaggtgctggagcgcgcaggcgccctggcctcgctgcgcagccccgaggccgaggccgtg
cgccggggccaggagcaactgcagagcgcctggggcgggctgcgggaagcggccgagaga
cggcagcagtcgctggacgccgccttccaggtggagcagtactacttcgacgtggccgag
gtggaggcgtggctgggggagcaggagctgctcatgatgagtgaggacaagggcaaggat
gaacagagcaccctgcagctgctcaagaagcacctgcagctggagcagggcgtggagaac
tacgaggaaagcatcgcgcagctctcgcgccagtgccgggcgctgctggagatggggcat
ccggacagtgagcagataagccggcgtcagtctcaggtggatcgtctgtacgtgtcactc
aaggagctgggcgaggagcgaagggtgagcctggagcagcaatactggctgtaccagctc
agccgtcaggtggatgagctggagcattggattgcagagaaggaggtagtagctggctca
cctgagcttggccaggacttcgagcatgtctcggtgctgcaggagaaattctcagagttc
gccagtgagacaggcacagccggcagggagcggctggcagccgtgaaccagatggtggat
gagctgatcgagtgcgggcatacggcagcagccaccatggccgagtggaaagatgggctg
aacgaggcctgggccgagctgctggagctcatgggcacgcgtgcccagctgctggctgcc
tcccgggagctacacaagttcttcagcgatgccagagagcttcaaggacagatcgaggag
aagcggaggcggctgccccgcctgaccgctccaccggagccgagacccagtgccagctcc
atgcagaggaccctgcgagccttcgagcacgacttgcagctcctcgtgtctcaggtgcgg
cagctgcaggagggcgcagcccagctgcgcaccgtgtatgcgggcgagcacgcagaggcc
atcgccagccgggagcaggaggtgctgcagggctggaaggagctgctggctgcctgcgag
gatgcccggctgcacgtgagctccacggccgacgccctgcgcttccacagccaggcccgg
gacctgctgtcttggatggacggcatcgccagccagatcggagcagctgacaaacccaga
gatgtgtcttctgtggaggtgcttatgaactaccaccagggcctgaagacggagctggaa
gcacgggtgcctgagctgacggcctgccaggagctggggcgctctctcctgctcaacaag
agtcccatggctgatgagatccaggctcagctagacaaactgggaagtaggaaggaagaa
gtgtcggacaagtgggaccgccattgggagtggcttcagcagatgctggaagtacaccag
tttgcccaggaggcggtggtggctgatgcctggctgacagctcaggagcccctcctgcag
agccgggagctgggcagcagcgtggacgaggtggagcagctcatccggcgacatgaagcc
ttccgcaaagcagccgcagcgtgggaagagagattcagctctctacggcgcctgaccacg
atcgagaaactgaaggccgaacagagcaagcaaccacccacccctctgctggggcgcaag
ttctttggggatcccacggaactggcagccaaagcagcccctctgctgcgaccagggggc
tacgacagaggcttggagcccctggcccgaagggcctcggacacgctgtcggccgaggtg
cggacccgggtggggtacgtgcgccaagagctcaagcccgagcgcctgcagccgcgcatc
gaccggctgcccgaggccccggccagggcggagcccgtgtccccgccggccgcgccctcg
gacacggtggacgcgccagtgtcccccatcacggtggtggagcaggtccggcctcggccc
gagcgccaggaagcagcagatcgcgcccccgaggagctgccccggaggcggcggcctgaa
cgccaagagtcggccgatcaacccgaggagacttcccggaggcggcggtcggaacggcag
gagtctgtggagcacgaggcggcgcacagcctgacactgggccgctacgagcaaatggag
aggcgaagagagcggcgggagcggcggctggagaggcaggaatccagcgaacaggagacg
cccaccagaggagaactggtcaaggggaaggccaccctggctgacattgtggaacagctg
caggagaaagaggcaggcccggggctcccagctgcagtgccatcgctgccccagcctcgc
gagcttccccccggccgcctgcctaatgggcttgagccgcccgaacggacacctcggcca
gatcggccgcgggctcgggaccggcccaagccccgacggcggccgaggcccagagagggt
ggcgagggcgggggaagcaggcgctcacgctccgccccggcccagggaggctccgccccc
gcgcctccgcccccgcccactcacacggtgcagcacgagggcttcctgttgcgcaagcgc
gagctggacgccaaccgcaagtcatccaatcggtcgtgggtgagcctctactgtgtgctc
agcaagggggagctaggcttctacaaggatgccaaaggcccagcctcagggggcacgcat
ggtggggagccactgctcagcctgcacaaggccaccagcgaggtggctaatgactacaag
aaaaagaaacacgtcttcaagctccagacccaagatggcagcgagtatttgcttcaggct
aaagatgaggaggagatgaacggttggctggaggctgtggcggcttcggtggccgaacat
gcagagattgcccgttggggccagacactccctaccacatcgtctacagatgagggcaat
cccaagcgagaagccggggagcgcagggccagtgggcgccggaagtga
DBGET
integrated database retrieval system
