Dipodomys merriami (Merriam's kangaroo rat): 138813880
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Entry
138813880 CDS
T11079
Symbol
Hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138813880 (Hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138813880 (Hnrnpm)
Spliceosome [BR:
dmer03041
]
Common components
Common spliceosomal components
hnRNP proteins
138813880 (Hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
Collagen_mid
RRM_5
RBD_DEAH11
RRM_3
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
138813880
NCBI-ProteinID:
XP_069858520
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEMERGMGAGFERDFARNEMGMARSFGEPLGRGMEILSNALKRGEIIA
KQGGGGGGGSVPGIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEMERMGLVMDRMGSV
ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT
IERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMG
LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMER
GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME
NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcatgaaaaaagctgctgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcaatgcaaaaggtg
atggctacgactggtgggatgggtatgggacctggtggcccaggaatgattaatatccca
cccagtatcctaaataatcccaacatcccaaatgagattatccatgcattgcaggctgga
agacttggaagcacagtgtttgtagcaaatctggattataaagttggctggaagaaactg
aaggaagtgtttagtatggctggtgtggtggtccgagcagacattctggaggataaagat
gggaaaagtcgcgggataggcactgtgactttcgagcagtccatcgaagctgtgcaagct
atatctatgtttaatggccagctgctatttgatagaccaatgcacgtcaaaatggatgag
agggctttaccaaagggagactttttccctcctgaacgtccccagcaacttccccatgga
cttggtggtattggcatgggtttggggccaggagggcagcctattgatgccaatcaccta
aacaaaggcatcggcatgggaaacataggacctgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggaccctttggtggtggtatggaaaacatg
gggcgatttggatctgggatgaacatgggccggataaatgagatggaacgtggcatgggt
gcaggatttgagagagactttgccagaaacgagatgggaatggctcgaagctttggagag
ccccttggcagaggaatggaaatcctaagtaatgcactgaagagaggagagatcattgca
aagcagggaggaggtggaggaggtggcagcgtccccgggatcgagaggatgggccctggc
attgaccgcattgggggggccggcatggagcgcatgggcgccggcctgggccacggcatg
gatcgagttggctccgagatggagcgcatgggcctagtcatggaccgcatgggctctgtg
gagcgcatgggctctggcattgagcgcatgggccccctgggtctcgaccacatggcctcc
agcatcgagcgtatgggccagaccatggagcgcattggctctggagtggagcgcatgggt
gccggcatgggctttggcctggagcgcatggccgcgcccatcgaccgcgtgggccagacc
attgagcgcatgggctctggtgtggagcgtatgggccctgccatcgaacgcatgggcctg
agcatggagcgcatggtgcccgcgggcatgggggccggcctggagcgcatgggccccgtg
atggatcgcatggccactggcctggagcgcatgggcgccaacaacctggagcgcatgggc
ctcgagcgcatgggtgccaacagtcttgagcggatgggcctggagcgcatgggcgccaac
agtctcgagcggatgggccctgccatgggaccagccttaggtgctggcattgagcgaatg
ggcctggccatgggaggcggtggaggtgccagcttcgatcgcgccattgagatggagcgt
ggaaactttggaggaagcttcgcaggttcctttggtggagccggaggccatgctcctggg
gtggccagaaaggcctgccagatattcgtaagaaatctcccatttgattttacttggaag
atgctaaaggacaaattcaacgaatgtggccacgtgctgtatgctgacatcaagatggag
aatgggaagtccaaggggtgcggtgtggttaagtttgagtcgccagaggtagccgaaaga
gcctgccggatgatgaatggcatgaagctgagtggccgggagatagatgttcgaattgat
agaaatgcttaa
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