Dipodomys merriami (Merriam's kangaroo rat): 138813928
Help
Entry
138813928 CDS
T11079
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03018
RNA degradation
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138813928
09123 Folding, sorting and degradation
03018 RNA degradation
138813928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138813928
03041 Spliceosome [BR:
dmer03041
]
138813928
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138813928
mRNA degradation factors
5'-3' decay
Lsm complex
138813928
Spliceosome [BR:
dmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138813928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
138813928
NCBI-ProteinID:
XP_069858624
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
MPPAPSLSLSLCSKYLDNVKFLLQDKEKKKKESILDLSKYIDKTIRVKFQGGREASGILK
GFDPLLNLVLDGTVEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFI
QQQEA
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgcccccggccccctctctctcgctttctctttgctcaaaatatctggataatgtgaag
tttctccttcaggacaaggagaagaagaagaaggagagcatcctagacttgtccaagtac
attgacaagaccatcagggtgaagttccagggaggacgagaagccagtggaatcctgaag
ggcttcgacccgctgctcaacctcgtgctggacggcaccgtggagtacatgcgagatccc
gacgaccagtacaagctcacggaggacacgcggcagctgggcctggtggtgtgccggggc
acgtcggtggtgctcatctgcccgcaggacggcatggaggccatccccaaccccttcatc
cagcagcaggaggcctag
DBGET
integrated database retrieval system
