Dipodomys merriami (Merriam's kangaroo rat): 138813974
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Entry
138813974 CDS
T11079
Symbol
Col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04151
PI3K-Akt signaling pathway
dmer04382
Cornified envelope formation
dmer04510
Focal adhesion
dmer04512
ECM-receptor interaction
dmer04820
Cytoskeleton in muscle cells
dmer04926
Relaxin signaling pathway
dmer04933
AGE-RAGE signaling pathway in diabetic complications
dmer04974
Protein digestion and absorption
dmer05146
Amoebiasis
dmer05165
Human papillomavirus infection
dmer05200
Pathways in cancer
dmer05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138813974 (Col4a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138813974 (Col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138813974 (Col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138813974 (Col4a2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
138813974 (Col4a2)
09154 Digestive system
04974 Protein digestion and absorption
138813974 (Col4a2)
09158 Development and regeneration
04382 Cornified envelope formation
138813974 (Col4a2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138813974 (Col4a2)
09162 Cancer: specific types
05222 Small cell lung cancer
138813974 (Col4a2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138813974 (Col4a2)
09174 Infectious disease: parasitic
05146 Amoebiasis
138813974 (Col4a2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
138813974 (Col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmer04147
]
138813974 (Col4a2)
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138813974 (Col4a2)
Exosome [BR:
dmer04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138813974 (Col4a2)
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138813974 (Col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
138813974
NCBI-ProteinID:
XP_069858725
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MGRGPTAAPGAALRRWLLLGAATLCLARGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGRG
QPGPVGPQGFSGPPGLQGFPGLQGRKGDKGERGAPGTTGPKGDVGARGVSGFPGADGIPG
HPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFPGSPGPQGPKGQKGEPYALSEEDRGK
YRGETGEPGLVGFQGPPGRPGPVGPMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGE
KGDIGQPGPNGIPSDTTLIGPTTTTYRPDQYKGQKGSEGEPGIPGVSLKGEEGVMGFPGA
RGFPGLEGERGAQGQKGSKGLDGFQGPGGPRGPKGEQGERGPPGPPAYSPHPSLAKGDRG
DPGFPGAHGEPGFRGEPGDPGTVGPPGPTIGVGDERRGLVGEMGPKGFPGDPGLPARYPG
LPGADGKPGLPGAPGPAGPPGPDGFLFGLKGAGGGVGYPGPSGFPGTRGQKGWKGDSGDC
KCADDFPGGLPGRPGPKGFPGINGEPGRKGQQGDPGQHGIPGFPGFKGAPGLAGIPGPKG
IKGDSRTVTTKGERGQPGVPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDSGY
PGIPGAKGFPGEAGPPGLGLPGPKGERGFPGDAGLPGPPGFQGPPGPPGTPGQIDCDTGV
KRPIGGDGQDAVHPDCVGGPQGSPGLQGFPGPAGAKGLRGIPGFPGADGAPGLKGFPGDP
GREGFPGPPGFMGPRGSKGAAGLPGPDGFPGPIGLPGPAGPPGDRGLPGEVLGAQPGPRG
DAGLPGHPGLKGLPGDVGPPGFRGSQGMPGVPGLKGQLGLPGPSGHPGPTGPPGRHGFPG
APGQGGPPGLPGAPGLGGLPGDRGEPGDTGAPGPVGMKGLSGDRGEAGFLGEQGHRGNPG
FKGMAGMPGSPGQKGERGSPGMDGFQGMIGLTGRPGFPGSKGEAGFFGIPGLKGLPGQPG
VKGNRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGLAGIPGL
PGRPGHIKGTKGDIGVPGVPGLPGFPGVSGPPGIVGFPGFTGSRGDKGAPGREGLYGETG
QTGDLGDVGDTIDLPGSPGLKGERGLTGTPGLKGFFGEKGTEGDVGFPGITGLTGAQGPP
GPKGQSGFPGLAGLQGPQGDPGRIGVPGEKGDYGWPGSPGLPGFPGFRGIGGLHGLPGTK
GFPGAPGADIHGDPGLPGPIGERGEPGEANTLPGPVGAPGQKGQQGVPGERGPAGSPGLQ
GFPGISPPSNISGLPGDVGAPGIFGLEGYRGPPGPPGPAALPGSKGEEGRPGASGITGSK
GWVGDPGPQGRPGVFGLPGEKGPKGEPGLMGNTGPSGPVGDRGPKGPKGDQGFPGAPGSV
GSPGIAGQPPKFAVQPGALGPQGRRGPPGAQGEMGPQGPPGEPGFRGTPGKAGPQGRGGV
SAVPGFRGDQGPMGHQGPIGQEGEPGRPGSPGLPGMPGRSTSIGYLLVKHSQTDQEPMCP
VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSY
WLSTTAPLPMMPVAEDEIQPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSF
LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIPEQSFQ
SSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagggccgacggcggcgcccggcgcagccctgcggcggtggctgctgctgggg
gctgcgaccctgtgcctggcccggggcgtcttggcgggtgtgaagaagtttgacgtgcct
tgtggagggagagactgcagcgggggctgccagtgctacccagagaaaggaggccggggc
cagccaggacccgtgggcccccaggggttcagcggaccaccaggactccaaggattccct
ggacttcaaggtcgcaaaggtgacaagggtgagcgtggagctcctgggacgactggaccg
aaaggagacgtgggggccagaggcgtgtccgggttcccaggggccgatggaattcccggg
catccagggcaaggcgggcccaggggaaggcccggctacgatggctgcaacgggaccagg
ggcgacgcaggtccacagggaccctccggctctgggggcttccccgggtcccccgggccc
caaggacccaaagggcagaaaggtgaaccgtacgccttgtctgaagaggaccggggcaag
tacaggggtgagaccggagagcctgggctggttggtttccaggggcctcctggccgcccc
gggcctgttggacccatgggtccagttggagctccaggaagaccgggaccacctggaccc
cctggaccaaaaggacagccaggcaacagaggacttggtttctatggagaaaagggcgaa
aagggcgacatcggccagccgggacccaatggcattccatctgacaccacgctcatcggg
cccacgaccaccacataccgcccggatcagtataagggtcaaaaggggagtgagggagag
ccggggattccgggcgtctcgttgaagggcgaggaaggcgtcatgggcttcccaggagct
cggggttttcctggcctcgaaggagagagaggagctcaaggacagaaaggaagcaagggt
ctggatggcttccagggccccgggggacccagaggacccaagggagaacagggggaacga
ggccccccgggaccaccggcctactccccccatccttccctggccaaaggcgacagaggt
gacccaggattcccaggggctcatggggagccaggattccggggcgagccaggagacccc
ggcacggtgggacccccagggccgaccatcggagttggagatgagaggagaggcctggtg
ggcgagatgggccccaaaggctttcccggtgacccaggccttcctgcccggtaccccggc
ctacctggagcagacggcaaacccgggctcccaggagcccccgggcctgcaggaccaccc
ggaccggatggtttcctgttcggccttaaaggagcaggaggaggagtgggctaccctggg
ccttctggcttcccaggcacccgaggacagaaagggtggaaaggtgactctggggactgc
aagtgtgcagatgactttcccgggggcctccctggacgacccggacccaagggctttcca
ggcatcaatggcgagcccgggaggaaaggccagcaaggggatcccgggcagcacggcatc
cctgggttcccagggttcaagggagcccccggcctggctggaatccctggccccaaggga
atcaaaggagactcaaggaccgtcaccaccaaaggtgagagggggcagccaggggttccc
ggcgttcacgggatgaagggtgatgacggcgtccccgggcgtgatgggcttgatggattc
cccggcctcccgggcccccctggcgatggcatcaagggccctccaggggactccggctac
ccaggcattcctggagccaagggctttccaggagaagcagggcccccgggactgggctta
ccaggcccaaagggagagcgtggtttcccaggagatgctggactgcctggacccccaggc
tttcaggggcctcctggacccccaggaaccccaggacaaatagattgtgacactggtgtg
aaaaggcccattggaggtgatggacaagatgccgttcatccagattgcgttggaggacca
cagggatcacccggcctgcaaggattcccaggccccgcaggtgccaaaggcctcagagga
ataccaggattcccgggagctgatggagccccaggactcaagggcttcccaggagaccca
ggtcgcgaaggcttccccgggcccccagggttcatgggaccccgaggatcaaaaggggcc
gcaggcctcccaggccccgatggattcccaggccccatcggcctgccggggccagctggg
cctcctggggacaggggccttccaggagaagtgctgggggcccagcccgggccgcgagga
gatgccggactgcctggacaccctgggctcaaaggccttccaggagatgtaggcccgccc
ggattcagaggaagccaagggatgcccggcgtgccggggctcaagggccagctgggcctc
cccggaccttcgggtcatccaggaccaaccggacctcccggacggcacgggttcccagga
gctcctgggcaaggaggacccccggggctgccaggagccccaggtcttggaggcctgccc
ggtgacagaggggagcctggcgatactggtgcccccggcccagtgggcatgaagggtctc
tccggcgacagaggcgaagctggattcttaggcgagcaaggtcatagaggaaaccctgga
tttaaaggaatggccggcatgcccggctcccctgggcagaaaggagagcggggctcacct
gggatggatggcttccagggaatgatcggactcacgggaagacctggcttcccaggctcc
aaaggagaggctgggttttttggaatacctggtctgaagggcttaccgggccagccaggt
gttaaaggcaaccgaggagaccctggtcccccaggaccaccacccattatcctgccgggg
atgaaggacattaagggggagaaaggagacgagggacccatgggcctaaagggttacttg
ggcttaaaaggtatccaaggaatgccaggggtccccgggctggcaggaatcccgggctta
cctgggaggcccggccacatcaaaggaaccaaaggagacatcggagtccccggcgtaccc
gggctgccaggattccccggcgtgtctggtcctcccggaattgtaggattcccggggttc
acaggaagcaggggtgacaaaggtgctcctggcagagaaggcctctacggtgagactggc
caaacaggggacttaggtgatgttggagacaccatagatctaccaggaagtccagggctg
aaaggggaacggggccttactggcacaccaggtctcaagggattcttcggagagaaagga
acagagggcgatgtgggctttcctgggataacaggcctgaccggagcccaaggccccccg
ggacctaaaggacagtcaggcttcccgggtctcgctgggctgcagggtccgcagggcgac
ccggggcggatcggagtgcccggtgagaaaggagactatggctggccaggcagtccaggc
ttgccaggttttcccggcttccgaggcatcggtggcttacacggcctgccaggcaccaaa
ggcttccctggagcgccaggtgctgacatccacggagacccggggttgccaggccccatc
ggggagaggggtgaacccggagaggccaatacccttccaggcccagtgggggccccgggc
cagaaaggacagcagggagtgccaggtgagcgaggcccagctgggagcccaggcctgcag
ggcttccccggcatcagccccccttccaacatctccggactgccgggtgacgtaggagcc
ccagggatcttcggcctagaaggataccgaggcccgccaggaccccctgggcctgccgct
cttcctgggagcaaaggagaggagggaaggcccggagcctcgggaatcaccgggtccaaa
ggatgggtcggggacccagggccccagggccggcctggcgtgtttggtctcccaggagaa
aaaggaccaaagggcgagccagggctcatgggcaacactggaccttccggacctgtgggt
gacagaggccccaaggggcccaaaggagaccagggattccccggcgctcctggctctgtg
gggtcccctggcatcgcgggacagcccccgaagtttgctgtgcagcccggagcactaggt
ccccagggtcggagaggcccgcctggggctcagggggagatggggccccaggggcctcct
ggagagccaggttttcgagggaccccagggaaggctggacctcagggaagaggtggcgtg
tctgctgttccagggttccggggagaccaagggcccatgggacaccagggcccaattgga
caagagggggaaccaggccgtccggggagccctggcctgcctggcatgcctgggcgcagc
accagcatcggctacctcttggtgaagcacagccagacggaccaggagcccatgtgccca
gtaggcatgaacaagctgtggagtggctacagtctgctgtactttgaaggccaggagaag
gctcacaaccaggacctggggctggctggctcctgcctggcacgcttcagcaccatgccc
ttcctgtactgcaatccgggcgacgtgtgctactatgccagccgcaacgacaagtcctac
tggctgtccaccaccgccccactgcccatgatgcccgtggccgaggacgagatccagccc
tacatcagccgctgctctgtgtgcgaggcgccggcggtggccatcgctgtccatagccaa
gacgtctccataccccactgccccgccggctggcgcagcctgtggatcggctactccttc
ctcatgcacacagccgctggggacgagggcggcggccaatcgctggtgtcgccgggcagc
tgtctggaggacttccgcgccacgcccttcatcgagtgtaacggggcccgagggacctgc
cactacttcgccaacaagtacagcttctggctgaccaccatccccgagcagagcttccag
agctcgccctcagccgacacgctgaaggccggcctcatccgcacgcacatcagccgctgc
caggtgtgcatgaagaacctgtga
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