Dipodomys merriami (Merriam's kangaroo rat): 138814570
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Entry
138814570 CDS
T11079
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
dmer04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138814570
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138814570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138814570
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138814570
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138814570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
138814570
NCBI-ProteinID:
XP_069859671
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGEKPRVLYSL
EFTFDADARVAITIYCQAVEEFLNGTAVYSPKSSALQSETVHYKRGVSQHFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQK
QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFKK
SKSHPASLASKKPKRETSADSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGVS
DGLSQASCPLAGLDRIMESSHQKGKPRSKSPDSTLRSPSSPTHEEEEEKLSENSDAPVPP
GVVSDTVLRESSSPESFGTEDVEEASLKQGSRVPSLEDVLQDGSPQHHGCGPPGPSADIY
LPGWSTSMETPHSLGTAGPPWPPRGGSSPEPGPTELTPL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggttccatcctgagccgtcgcatcgcgggggtggaagacatcgacatccaggcgaac
tcggcctatcgctaccctccgaagtccggcaattactttgcttcacactttttcatggga
ggtgagaaatttgacacccctcaccctgaaggttacctgtttggagagaacatggatttg
aacttcctgggcagccgccctgtccagtttccctacgtcacccctgccccccacgagccg
gtgaagacactgaggagcctggtgaacatccgcaaggactccctccggcttgtgaggtat
aaagacgatgctgacagccccaccgaggatggtgagaagccccgggtgctctacagcctg
gagttcactttcgacgcggatgcacgcgtggccatcactatctactgccaggcagtggag
gagtttctgaacggcaccgcagtgtacagccccaagagctctgctctgcagtcggagaca
gtgcactacaagaggggcgtgagccagcacttctccctgccatccttcaagatcgacttc
tccgagtggaaagatgatgagctgaacttcgacctggaccggggtgtgtttccagtggtc
atccaagctgtggtggatgagggagatgttgtggaagtgacgggccatgctcatgtgctc
ttggccgcctttgaaaagcacgtggatggaagcttctccgtgaagcctttaaagcagaag
cagattgtggaccgggtcagctacctgctgcaggagatctacggcattgagaacaagaac
aatcaggaaaccaagccctctgacgatgagaacagcgacaacagcaacgagtgtgtggtg
tgcctgtcggacctgagggacacgctgatcctgccctgccgccacctgtgcctgtgcacc
tcctgtgctgacacgctgcggtaccaggccaacaactgccctatctgccggctgccattc
cgggccctcctgcagattcgggctgtgcggaagaagccaggggccctgtcccccatctcg
tttagccctgttctggcccagagtgtggaccatgacgagcactcgtgtccttttaaaaaa
tcaaagtcgcaccccgcctcactggccagcaagaaacctaaaagggaaacaagcgccgac
agcgtcccacccggctacgagcccatctccctgctggaagcgctcaatggtctgcgggct
gtttccccggccatcccttcggctcccctttacgaggaaatcacctactccggcgtctca
gatggtctctcccaggccagctgtccattggctgggcttgaccgaatcatggaaagcagc
caccagaagggcaagccgaggagcaagtctccagacagcaccctgaggtccccgtcatct
cccacccatgaggaggaggaagaaaagctctcagagaactcggacgctccggtccctcca
ggcgtcgtctcagacacggtgctgcgggagagcagctccccggagagctttggaacagaa
gacgttgaggaggcgtcactaaagcaagggagccgggtgccctccctcgaggacgtcctg
caggatggcagtccccagcaccatggctgcggcccgccaggcccttccgccgacatctac
ctgccaggatggtccacctccatggagacgccccacagcctcggcaccgcgggccctccc
tggcctccacgcggcggctccagccccgagcccgggcccacggagctcaccccactctga
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