Dipodomys merriami (Merriam's kangaroo rat): 138814669
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Entry
138814669 CDS
T11079
Symbol
Hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04371
Apelin signaling pathway
dmer04613
Neutrophil extracellular trap formation
dmer05034
Alcoholism
dmer05203
Viral carcinogenesis
dmer05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
138814669 (Hdac4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
138814669 (Hdac4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
138814669 (Hdac4)
05203 Viral carcinogenesis
138814669 (Hdac4)
09165 Substance dependence
05034 Alcoholism
138814669 (Hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138814669 (Hdac4)
Enzymes [BR:
dmer01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138814669 (Hdac4)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138814669 (Hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
138814669
NCBI-ProteinID:
XP_069859945
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSSQSHPDGLSGRDQPLELLNPARVNHMPSSVDVATALPLQVAPTAVPMDLRLDRPFPLP
VAEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGP
SSPNSSSGNVSTENGIAPAVPSVPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPA
TGPSAGTASQPDAERLALPALQQRISLFPGTHLAPFLSASPLEREGGAPHSPLLQHMVLL
EPPPAQTPLVTGLGALPLHAQSLVSADRLSPSVHKLRQHRPLGRTQSAPLPQSAQALQHL
VIQQQHQQFLEKHKQQFQQQQLHLSKIIPKPSEPGRQPESHPEETEEELREHQALLDEPF
LDRPPGQKEAHPLASIQVKQEPIESDEEEAESVREAEQGQRPPTEQELLFRQQALLLEQQ
RIHQLRNFQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPSTKPRFTTGLVYDT
LMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQTVHSEAHA
LLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVE
LVFKVVTGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQLRLNVSKILIVDWD
VHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFTVNMAFTGGLDP
PMGDTEYLAAFRAVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQL
MGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPLSEKVLQQRPNANAVRSMEKV
MEIHSKHWRCLQRLASTVGHSLTEAQKCESEEAETVTAMASLSVGVKPAEKRPDEEPMEE
EPPL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccactggagctgctg
aaccctgcccgagtgaaccacatgcccagctcggtggatgtggccacggcactgcctctg
caagtagcccccacagcagtgcccatggacctgcgcctggaccgcccgttcccgctgccc
gtggcggagccggcgctgcgggagcagcagctgcagcaggagctcctggccctgaagcag
aagcagcagatccagcggcagatcctcatcgccgagttccagcgacagcacgagcagctc
tcgcggcagcacgaagcccagctgcacgagcacatcaagcagcagcaggagatgctagcc
atgaaacaccagcaggagctgctggagcaccagcgtaagctggagcggcaccgccaggag
caggagctggagaagcagcaccgtgagcagaaactgcagcagctcaagaacaaggagaag
ggcaaagagagtgccgtggccagcactgaggtgaagatgaagctgcaggagtttgtcctc
aacaagaagaaggcactagcccaccggaacctgaaccactgcatctccagcgacccccgc
tactggtacgggaagacacagcacagctccctggaccagagctcacctcctcagagtggg
gtgtcagcttcctacaaccacccagtcctggggatgtacgacgccaaagatgacttccct
cttaggaaaacagcttctgaacccaacctgaaactgcggtccaggcttaagcagaaagtc
gctgagagacggagcagccccctgttacgcaggaaggacggacctgtggtcactgctctt
aaaaagcgtcccctggatgtcacagactctgcgtgtagcagtgctcccggctccggaccc
agctcgcccaatagcagctccggcaatgtcagcactgagaacggcatcgcacccgcagtg
cccagtgtcccagctgagaccagcttggcgcacaggctcgtgactcgagaaggctctgtc
gcccctctccctctctacacgtcgccatccttgcccaatatcaccttaggacttcctgcc
accggcccctctgcgggcacagcgagccagccagacgccgagaggctcgctctcccagcc
ctgcagcagcggatctccctgttccccggcacccacctggccccgttcctgagcgcctcg
cccctggagcgggagggcggagcgcctcacagccctctgctgcagcacatggtcctgctg
gagccgccgcccgcgcagacacccctcgtcacaggcctgggggcactgcccctccacgca
cagtccctggtcagtgcagaccgcctgtccccgtctgtgcacaagctgcggcagcaccgc
ccgctggggcgcacgcagtcggcgcccctgccgcagagcgcgcaggccctgcagcacctg
gtcatccagcagcagcaccagcagttcctggagaagcacaagcagcagtttcagcagcag
cagctgcacctcagcaagattatccccaaaccaagtgagccaggtcggcagcctgaaagc
catcctgaggagaccgaggaggagctccgagagcaccaggccctgctggatgagcccttc
ctcgaccggcctcccggacagaaggaggcccacccattggccagcatccaggtgaagcag
gaacccattgagagtgatgaagaggaggcggagtctgtgcgggaagcggaacaaggccag
cgcccacccactgagcaggaactgctcttcagacagcaagccctcctattggagcagcag
cggatccaccagctgaggaacttccaggcgtccatggaggctgctggcatccccgtgtcg
ttcggtggccacaggcctctgtcccgggcacagtcgtctccagcttctgccaccttcccc
atgtcagtccaggagccatccaccaagccaaggttcaccacaggccttgtgtatgacacg
ctgatgctaaagcaccagtgcacctgtgggaacaccaacagccaccctgagcatgctggg
aggatccagagcatctggtcccgcctgcaggagacaggcctgcgcagcaagtgtgagtgc
atccgtggacggaaggccacgctggaggagctgcagaccgtgcactcagaggcccacgca
ctgctctatggcacaaaccccctcaacaggcaaaaactggacagcaagaagcttctagga
tcgctgacctcagtgtttgtcaggcttccttgcggtggtgtcggggtggacagcgacacc
atatggaatgaggtgcactcatcaggggcggcccgcctcgcagtggggtgcgtggtggag
ttggtcttcaaggtggttacaggggagctgaagaacggctttgctgtggtccgcccccca
ggacatcatgctgaggagagcacccccatggggttttgttacttcaactccgtggcagtg
gcggccaagcttctccagctgaggctgaatgtgagcaagatcctcattgtcgactgggat
gtgcaccacgggaatggaacccagcaggctttctacagtgatcccagtgtgctctacgtg
tccctgcaccgctacgacgacgggaacttcttcccgggcagcggggcacctgatgaggtg
ggcacagggccaggagtgggcttcactgtcaacatggctttcacgggcggcctggaccct
cccatgggagacacagagtacttagcggccttcagggccgtggtcatgccgatcgccaac
gagtttgccccggatgtggtgctggtgtcctcgggcttcgatgctgtagagggtcacccg
acgcccctcggaggctacaacctgtctgccaaatgttttgggtacctgacaaagcagctg
atgggcctggccggcggccgggtcgtgctggccctggagggcggccatgacctgacagcc
atctgcgatgcctctgaagcctgtgtttctgctctgctgggaaatgagctcgagcctctg
tcagaaaaggtgttgcagcagagacccaatgccaatgctgtgcgctccatggagaaggtc
atggagatccacagcaagcactggcgctgcctgcagcgcctcgcctccaccgtgggccat
tctctgacggaggcgcagaagtgcgagagcgaagaggccgagaccgtcaccgccatggcc
tcgctgtccgtgggcgtgaagccggcggagaagaggcccgacgaggagcccatggaggag
gagccaccgctgtag
DBGET
integrated database retrieval system
