Dipodomys merriami (Merriam's kangaroo rat): 138814677
Help
Entry
138814677 CDS
T11079
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmer03037
]
138814677
Cilium and associated proteins [BR:
dmer03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
138814677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
TPR_GEMI5
TPR_IFT80_172
WD40
Clathrin
Beta-prop_WDR75_1st
TPR_COPA_B
RNase_HII
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
tRNA_int_end_N2
Exo84_C
Motif
Other DBs
NCBI-GeneID:
138814677
NCBI-ProteinID:
XP_069859926
LinkDB
All DBs
Position
Unknown
AA seq
1475 aa
AA seq
DB search
MALYFDHRIQAPDAAGSPSHISWHPVHPFLAVASTGTMSGGSVDIYLEQGEPVPDTHIER
SFRVASFCWHPTRLVLAIGWETGEVIVFNKQDKEQHTVPTTHSADITILSWSTSGSCLVS
GDRLGVLLLWRLDQRGRVQGTPLLKHEYGKHLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSGFGSLLKMGSQDGLSFFVSLTDGSVHYVDEKGKTTQVASTDSAIQTLFYIE
KREALVVVTEKLLLSLYVVTPEGEAEEVMKVKLSGKTGHRADIALIEGSLLVMAIGEAVL
RFWDLERGENYILSPEEKFGFEKGENINCVCYCKAKGLLAAGTSKGQIAMWRKVPGLPGS
RGVEGKDAWALRTPTELEGNITQIKWGSRKNLLAVSTISSVSILSEQAMSSHFNQQVAAV
QISPSLLNVCFLSTGSSHSLRTDMHISGVFVTKDAVAVWNGKQIAIFEPSGTTLRNAGSF
LCESPVLAMYEESVYTVEPNRVQVRTWQGTVKQLLLFSETEGNPCILDICGTFLVVGTDL
AHFKSFDLSRREAKVHCNCKNLAELLPGVGAISSLRCNASGSKISILLSKTDNSPDSKLC
FYDVEMDMVTVFDFKTGQIDQRETLSFNGHETNKNRVFADESLTNYIPVSHFWDQSEPRL
FVCEAVQEAHGASPQAAERQPPLEDSSRRSEGVLILSFFASEEHGFLLHDSFPLPSAYQT
LLGVEVPHYYFTKKLLFQRGGLYSTVPGEAGTEDKVDSDHHQIPQMVAKKPLRDFVGLED
CDKPTRDAMLNFSFFATIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM
GHARGARALREAESEPELEARVAMLAIQLGMLEDAEQLYKRCQRYDLLNQFYQASDQWQK
AVEVAELHDRIHLRTTYYNYARHLEASAHCGLALSYYEKSDTHRFEVPRMLAEDLQSLEL
YINKMKDKTLWRWWAQYLESQAEMSSALHYYELAQDYFSLVRIHCFQGNIQKAAEIANET
GNWAASYHLARQYESQEDVRQAVYFYARAQAFNNAIRLCKENNLDDQLMNLALLSSPEDM
IEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFATQQFAALQLIAEDLDEKSDPALLA
RCSDFCIEHKQFEKAVDLLLAAKKYQEALQLCVDQNMTITEEMAEKMTVSKDSKELTEES
RRELLEQIANCCMRQGHYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIY
IMAANYLQSLDWRKEPEIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGAL
TEAYKCLSKAKAKSPLDQETKLAQLQSKMTLVKRFIQARRNYTEDPKESVRQCELLLEEP
DLDSTIRIGDVYGFLVEHHVHRQEHQMAYKYLEEMRKRLPSANMSYYVDQRTVDAVHQAL
GLPLSRIMPERIRHNSMEDHKEVDEEVVEEVESEP
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggccctctattttgatcaccgaatccaagccccagatgcagctgggtctccgtcccac
atcagttggcaccctgtccacccattcctggcagtggcctccactggcacaatgtcagga
ggaagtgtggacatctacctggaacaaggtgagcctgtgccagacacacacatcgagagg
tccttccgggtggcttccttttgttggcacccaacacggctggtcctggcaatcggctgg
gagactggagaagtgatagtatttaacaagcaggacaaggaacagcacacagtgcccaca
acacacagtgccgacatcaccatcctcagctggagcaccagtgggagctgcctggtgtct
ggtgacaggcttggtgtcctgctcctgtggagactggaccaacggggccgtgtgcagggg
acacccctgctgaagcatgagtatgggaagcacctcacccactgcatcttccggctgccc
cctcctggcgaagacttggttcagttggcaaaggcagcagtgagtggtgatgagaaagcc
ttggacatgtttaactggaggaaaagtggcttcggaagtttgctgaagatggggtctcaa
gatgggctgtcgttctttgtcagtctgaccgatgggtcggtgcactatgtggatgagaag
ggtaagaccacccaggtggcatccacagacagcgccatccagacgctcttctacattgag
aagagagaggcactggtggtggtcacagagaagcttctactgtccctttacgtggtgaca
cctgagggggaggctgaagaagtgatgaaggtgaagctgagtgggaaaaccggtcaccgg
gcagacatcgctttgattgagggcagccttcttgtgatggccataggggaagctgtcctc
agattctgggacttggaacgaggagaaaattatatactaagtccagaggagaagtttggc
tttgaaaaaggagaaaatataaactgtgtttgttactgtaaagccaaaggtcttctggca
gctggtaccagtaaagggcaaatagccatgtggagaaaagtgccaggccttccaggcagc
cgtggggtagaaggaaaggatgcgtgggccctccggacgcccactgagcttgaaggaaac
atcacacaaataaagtggggctccagaaagaatcttctggcggtgagcaccatcagctcc
gtgtccatcctcagtgagcaggccatgtcctcacacttcaaccagcaagtggctgccgta
cagatctctcccagtttactcaacgtgtgcttcctgtccacgggaagctcgcacagcctg
cgcacagacatgcatatcagcggagtgtttgtcaccaaggatgctgtggctgtgtggaat
ggaaaacagatagcgatctttgagccttctggaaccaccttacggaatgcaggttccttc
ctgtgtgagtcccctgtgttagcgatgtatgaggaaagtgtttatacagtggagccaaac
cgagttcaagttcggacctggcaggggacggtcaagcaactgctgctgttttctgagact
gaagggaacccctgcatcctggacatctgtgggactttcctggttgtggggacagactta
gctcacttcaaaagctttgatctttcccgaagggaggccaaggtgcactgcaactgtaag
aacctggctgagctgctccctggagtgggggccatctcttccctccggtgcaatgccagt
ggaagcaagatcagcatcctgctcagtaagactgacaacagccccgattccaaactctgc
ttctatgacgttgagatggacatggtgactgtcttcgactttaagactgggcagattgac
cagcgagagacactctcctttaacgggcacgagactaacaagaaccgtgtctttgcggat
gagagtctgacaaattacattcctgtaagccatttctgggatcagagcgagccgcggctt
tttgtgtgtgaggctgtgcaggaggcacacggagcatcgccgcaggctgcagagcggcag
ccccccctggaggacagcagcagacgctcggaaggtgttttgattttgtcattcttcgct
tctgaagaacatggcttcctgctccatgacagcttcccccttccctctgcctaccagacc
ctcctgggggtggaagtaccccactattacttcacaaaaaagttgttgttccagagagga
ggactgtacagcacagtccctggagaggcaggcaccgaagacaaggtggattctgatcac
caccagataccccagatggtggccaagaaacctctgcgagactttgtggggctggaagac
tgcgacaagcccactcgagatgccatgctcaatttcagcttcttcgccaccattggagac
atggatgaagctttcaaatctatcaaactcattaaaagcgaagccgtctgggagaacatg
gcacgcatgtgtgtcaaaacccagcgtctggacgtggccaaggtgtgcctggggaacatg
ggccacgcccgcggggcacgggcgctgcgggaggccgagtctgagcccgagctggaggcc
agagtggccatgctggccattcagctgggcatgctggaagacgctgagcagctgtacaag
cgctgccagcgctacgacctcctcaaccagttctaccaggcctcagaccagtggcagaag
gcggtggaggtggccgagctccacgaccgcatccacctgcgcaccacctactacaactac
gccaggcacctggaggccagcgcccactgcggcctggccctcagctactacgagaagtca
gacacgcaccgcttcgaggtgcccaggatgctggccgaggacctgcagtccctggagctc
tacatcaacaagatgaaggacaagacgctgtggaggtggtgggcccagtacctggagagc
caggcggagatgagctcagcgctgcactactacgagctggcccaggactacttctccctg
gtccgcattcactgcttccagggcaacattcagaaggctgcggaaatagccaacgagact
ggaaactgggctgcgtcctatcacctggccaggcagtacgagagccaggaggatgtgagg
caggccgtgtacttctacgcacgcgcacaggccttcaacaatgccatccgcctgtgcaag
gagaacaacttggatgaccagctcatgaacttggccctgctgagctccccagaggacatg
atcgaggccgcgaggtactacgaggagaagggcgagcagatggacagggctgtcatgctt
taccacaaggctggccacttctccaaggccctggagctggccttcgccacccagcagttt
gcggctctgcagctcatagcagaggacctggacgagaagtcggaccccgcactcctggcc
cgatgctccgacttctgcatcgagcacaagcagtttgagaaggctgtggacctgctgttg
gctgccaagaagtatcaggaggctctgcagctgtgtgtggaccagaatatgaccatcact
gaggagatggctgagaagatgaccgtgtccaaagactcaaaggagctgactgaggagtcg
cggcgagagctgctagaacagattgccaactgctgcatgcgccagggccactaccacctg
gccaccaagaagtacacacaggctgggaacaagctgaaggccatgagagcgctgctcaag
tctggggacacagagaagattgtgttctttgcgggtgtctccaggcagaaggaaatctac
atcatggctgccaattacctgcagtccttggactggcggaaggagccagagatcatgaag
aacatcatcagcttctacaccaaaggtcgagccctggacctcctggccggcttctatgat
gcctgtgcccaggtggagatcgacgaatatcagaactatgacaaggcccatggcgcactg
accgaggcctacaagtgcctgtccaaggccaaagccaagagcccgctggaccaggagacg
aagctggcccagctgcagagcaagatgacactggtgaagagattcatccaggcccgcagg
aactacacggaggaccccaaggagtcggtgaggcagtgcgagctgctcctggaggagcca
gacctggacagcactatccgcatcggcgatgtgtacggcttcctggtggagcaccacgtg
cacaggcaggagcaccagatggcctacaagtaccttgaggagatgcggaagagacttcct
tccgccaatatgtcctactatgtggaccagcgcacggtggacgccgtgcaccaggccctg
ggcctcccgctgtcccgcatcatgcctgagcggatccgccacaacagcatggaggaccac
aaggaggtggacgaggaagtggtggaggaggtggagagtgagccctga
DBGET
integrated database retrieval system
