Dipodomys merriami (Merriam's kangaroo rat): 138815008
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Entry
138815008 CDS
T11079
Name
(RefSeq) structure-specific endonuclease subunit SLX1-like isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
138815008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138815008
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138815008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
Motif
Other DBs
NCBI-GeneID:
138815008
NCBI-ProteinID:
XP_069860311
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MGPGGGAVKPGRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGR
GPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRLVHVGPRMRSEVAFDFHLRVLAHMLRA
PPWARLPLTLRWLRQDFRRDLCPPPPPHVPLAFGPPPPKASAPKPRAVPVADRPDQGSET
GCTLCACAFQDEEGPLCCPHPDCSLRAHVICLAEEFLREEPEQLLPLEGQCPCCKNSLLW
GDLISLCGMSTEEEEEDSELEQEHWTDMLET
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccggagggggtgcagtgaagccagggcgcttcttcggggtctacctgctctac
tgcctgaatcctcggcatcgcggccgagtctatgtcgggttcacagttaatcctgctcgt
cgagtccagcagcacaacggcggtcgcaaaaagggcggagcctggcggactagcggaaga
gggccgtgggagatggtgctcattgtgcatggcttcccgtctgctgtagcagctcttcgg
ttcgagtgggcctggcagcacccgcaagcctcgcgccgccttgtacacgtgggtccgcgc
atgcgcagtgaagtagccttcgatttccacctgcgcgtgctggcgcacatgctgcgtgcg
ccgccctgggcgcgtctcccgctcacactgcgctggctacgccaggacttccgccgagat
ctttgtcctccgccgccgccgcacgtgccactggcctttgggccaccgccgcctaaggcc
tcggcccccaagcccagggctgtgcctgtagctgacaggcctgaccaaggctctgagacc
ggctgcaccctctgcgcatgcgcgttccaggatgaagaggggcccctgtgctgcccccac
cctgactgctccctcagggcccatgtaatctgcttggcagaggagttccttagggaagaa
ccagagcagcttttgcccctagaaggccagtgtccttgttgtaagaactcactgctctgg
ggagacctgatctcactgtgtggaatgagcactgaggaggaagaggaggactcagaatta
gaacaggaacactggacagacatgttggaaacctga
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