Dipodomys merriami (Merriam's kangaroo rat): 138815051
Help
Entry
138815051 CDS
T11079
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138815051 (Rbbp6)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138815051 (Rbbp6)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
U-box type E3
138815051 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
138815051
NCBI-ProteinID:
XP_069860414
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASITLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSAHPAPSISSLTSNQSLAPPVPGSASNAPAPVPDITATVSISVH
SEKSDGPFRDSDTKLLPAAALASEHSKGTSSIALTALMEEKGYQVPVLGTPSLLGQSLLH
GQLIPTTGPVRINAARPGGGRPGWEHWITGLHHHGSLTRCLSSNKLGYLVSPPQQIRRGE
RSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSP
QFPPGQPPPAGYSVPPPGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQ
RRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKS
RSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRR
YHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDSFEKD
RYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERLLPLNIRNSPFTRGRREDYVG
GQGHRSRNIGGSYPEKLSARDSHNQKDNTKSKEKESENVPGDGKGNKHKKHRKRRKGEES
EGFLNPELLETSRKSREPSGVEETKTDTLFVLPSRDDATPVRDEPMDAESITFKSMSEKD
KREKDKPKAKGDKTKRKSDGSATSKKENAVKPTKGPQEKLDGEREKSPRAEPPLKKAKEE
APKTDAAKPSSSSSSQKDEKVPGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKPEKL
TNKEEKAKKPEKSKALESKGEKRKRKTEEKGVDKDFESSSLKISKLEGTEIVKPSPKRKM
EPDVEKMDRSPEKDKAASSTAPAKKIKLNRETGKKIGSTENVPSAKEPSEKSESTSGKIK
QEKVKGKAKRKVTGTEGSSSTLVDYTSTSSTGGSPVRKCEEKTDTKRTVIKTMEEYNNDN
TAPAEDVIIMIQVPQSKWDKDDFESEEEEMKSTQPMPTVAKPSSVIKTVSTKPSTAVKYT
EKDSEPSEKIQKLTKEVSHELVQHEVKSSKNSASSEKGKTKDRDHSVLEKENPEKRKNST
QPEKDNNLDRLSEQGTFKSLSQSSKESRPSDNKHDSVRGSSNKDFTPNRDKKTDFDNREH
SSSKRRDERSELTRRKDSPPRSKDSSGQKSRPREERDLPKKGAGDSKKSNSSPSRDKKPH
DYKAPYDTKRSNEETKSVDKNPCKDREKHVSEAWNNKESSGAKLPSVPSVPSVPSVPSVP
IPPIPTEPQVEKEPVTAHLDKNAVKTKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSES
NVSVKEEETSTNISKDLKDKITVEKAKESVDPAALSQAGVSRTQSQSSPSVSPSRSHSPS
GSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKK
KKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtacattataaattctcctctaaactcaactatgataccgtcacttttgat
ggactccacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgattgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctgattcctaagaactcatctgtaattgttagaagaattcctattggaggtgtt
aaatccacaagcaagacatatgttataagtcgaactgagccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctattactctggcccagcttacaaagaccgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggtccaccacctccatcttatacc
tgttttcgttgtggtaaacctggccattatattaagaattgcccgacaaatggggataag
aactttgaatctggtcctcggattaaaaagagcactggtattcctagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaacaatagatgcagaggcgtatgcaatcgggaagaaagagaaaccacccttcctacca
gaggagccatcctcttcgtcagaagaggatgatcccatcccagatgaattgctgtgcctc
atctgcaaagacatcatgactgatgccgttgtcattccctgctgtggaaacagttactgt
gatgagtgtataagaacagcactcttggaatcagatgaacatacatgtccaacatgtcat
caaaatgatgtatctcctgatgctttaattgccaataaatttttacgacaggctgttaat
aacttcaaaaatgaaactggttatacaaaaagactacgaaaacaattacctccaccacca
cccccaataccacctccaagacctctcattcagcggaacctgcagcctctcatgaggtct
ccaatatcacgacaacaagatcctctgatgattccagtgacgtcttcatcggctcacccc
gctccctcaatatcttcattaacttccaaccaatccttggcccctcctgtacctggaagt
gcatctaatgccccagctcctgtacccgatataaccgcaacagtgtccatatcagtccat
tcagaaaagtcagatggacctttccgggactctgatactaaattactgccagctgcagcc
cttgcttcagaacattcaaagggaacctcctcaattgcacttactgctcttatggaagag
aagggttaccaggtgcctgtccttggaactccatctttgctgggacagtcattattacac
ggacagttgatccctacgactggcccagtaaggataaatgctgctcggccaggtgggggt
cgaccaggttgggaacactggattacaggtttgcaccaccatggcagccttacccggtgt
ttaagttcgaacaagcttggatatctggtttctccaccacagcaaattagaagaggggag
aggagctgctacagaagtataaatcgtgggcgacaccacagcgaaagatcccagaggact
caaggcccatcactaccagcaactccagtcttcgtacctgttcctccaccacctctgtat
ccacctcccccccacacgcttcctctacctccaggtgttcctcccccacagttttctcct
cagtttccgcctggccagccgcctcctgctgggtatagcgtccctcctccagggtttcca
ccggcacctgccaacttatccacaccctgggtatcatcaggagtgcagacagctcattca
aataccatcccaacaacacaagcaccacctttgtccagggaagaattctatagagaacag
cggcgactaaaagaagaggaaaagaaaaagtccaagctagatgagtttacaaatgatttt
gctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgctcattttccagg
tctaaatctccctatagtggttcatcatattcaagaagttcatacacttactctaagtca
agatctggttcaacacgttcacgttcttattctcgatccttcagccgctcacattctcgt
tcctattcaagatcacctccataccccagaagaggcagaggcaagagtcgaaattaccgt
tctcggtctagatcgcatggatatcatcggtctaggtccaggtcacccccatatagacga
taccattcacgatcgagatctcctcaagcattcaggggccagtctcccaacaagcgtaat
gtacctcaaggagaaacagagcgtgaatattttaatagatacagagaagttccaccacct
tatgacatgaaagcgtattatgggaggagtgttgactttagagactcatttgagaaagac
cgttaccgagaatgggagagaaaatacagagagtggtatgaaaagtactacaaagggtat
gctgctggagcacaacctagaccctcagcaaacagagagaacttttctccagagagactt
ctacctctcaacatcaggaactcacccttcacaagaggccgcagagaagactatgttggt
ggacaaggtcataggagtcgaaatataggtggcagttacccagaaaagctttcagccaga
gacagtcacaatcagaaggataacacaaaatcaaaagagaaggagagtgaaaatgttccc
ggagatggcaaaggaaataaacacaagaagcacagaaaaagaagaaagggagaagaaagc
gaaggctttctgaacccagagttactagagacgtctagaaaatccagagaaccttcaggt
gttgaagaaactaagacagatacattatttgttctcccaagtagagacgatgctacacct
gttagggatgagccaatggacgcagaatccatcacttttaaatccatgtctgaaaaagac
aagcgagaaaaagataagccaaaagcaaaaggtgacaagaccaaacggaaaagtgatggg
tctgctacatccaaaaaagaaaatgctgtcaaacccactaaaggaccccaagaaaagcta
gatggggaacgtgaaaaatctcctcgggctgaacctccacttaaaaaggccaaagaggag
gctccaaagactgatgctgctaaaccgtcatcatcatcgtcctctcagaaggacgaaaag
gtccctgggacccccaggaaagcccactcaaagtcagcaaaggaacaccaggagacaaag
cccgtcaaagaggagaaggtgaagaaggattactccaaagacgtgaaaccagaaaagcta
accaataaggaagaaaaggccaagaagcctgagaagagtaaagcacttgagagcaaggga
gaaaaaagaaagagaaaaacagaagaaaaaggtgtggataaagattttgaatcttcttca
ctgaagatctctaaactagaaggaacagaaatagtgaaaccatctcctaaacgcaaaatg
gaacctgacgttgaaaagatggacaggagccccgaaaaggacaaggctgcgtcatcaacg
gccccagccaagaaaatcaagctcaacagagaaacggggaagaaaattggaagcacagaa
aatgtaccaagtgcaaaagaaccatctgaaaaatcagagtcaacatctgggaaaattaag
caggaaaaggtcaaagggaaggctaagcggaaagtaactggaacagaaggctccagctct
actcttgtggattataccagcacaagctcaactggaggcagtcctgtgcggaaatgtgaa
gaaaaaacagatacaaagcgaactgtgattaaaactatggaagaatacaataatgacaac
accgctcctgctgaagatgttattattatgatccaggttcctcagtccaagtgggacaaa
gatgactttgaatctgaggaagaagagatgaaatccacacagcctatgccaactgtagca
aaaccgtccagtgttataaaaactgtgagcaccaagccatcaactgcagtcaagtatacc
gagaaagacagtgagccatcagagaaaattcagaagctcaccaaggaggtgagccacgaa
cttgtgcagcatgaagtcaaaagctcaaaaaactctgcatctagtgagaagggcaagacc
aaagatcgagatcattcagtgttagaaaaggaaaaccctgaaaagaggaagaatagcact
caaccagagaaagataataatttggaccgtctgagtgaacaaggaacatttaaaagtcta
tctcaatcttccaaagagtccagaccttccgataataagcacgattctgtgcgtggttcc
tcaaataaagactttactcccaacagagacaaaaaaactgactttgacaaccgagagcat
tctagttccaagcggagagatgaaagaagtgagttaacaagaagaaaagactctcctcct
cgcagtaaagactcttctgggcagaaaagtaggccgagggaggagagagatttgcctaaa
aaaggagcaggagactccaaaaaaagtaattctagtccgtcaagggacaaaaagcctcat
gattataaagccccttatgatactaaacgctcaaatgaagagacaaaatctgtagacaaa
aatccctgcaaggatcgtgagaagcatgtgtcagaggcatggaacaataaggaatcgagt
ggcgccaagttgcctagtgtgcccagcgtgcccagcgtgcccagtgtgcccagtgtgccc
atcccacccatcccaacagagccacaggtagaaaaggagccggtgacagcacacctcgac
aagaatgctgttaagactaaaccccagctaagccattcctctagactttcctctgactta
actcgagagactgacgaagctgcttttgaaccagactataatgagagcgacagtgaaagt
aatgtatcggtgaaagaagaggaaacgtccacgaacatttccaaggacctaaaagataaa
ataactgtagagaaagcaaaagagagcgtggacccagcagccctgagccaagcaggagtg
agcaggacccagagtcagagcagccccagcgtgagtcctagccgaagccacagcccgtcc
ggaagccagacccgcagtcacagcagcagtgccagctcagcagagagtcaggacagcaag
aagaagaagaagaagaaggaaaagaagaagcacaagaaacataaaaaacataagaaacat
aagaagcacgcaggcactgaagtagaattggaaaaaagccaaaaacacaaacacaagaaa
aagaagtcgaagaagagcaaagataaagaaaaggagaaggagaaagatgaccaaaaagtg
aaatctgtcaccgtgtag
DBGET
integrated database retrieval system
