Dipodomys merriami (Merriam's kangaroo rat): 138815274
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Entry
138815274 CDS
T11079
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138815274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138815274
Enzymes [BR:
dmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
138815274
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
138815274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
138815274
NCBI-ProteinID:
XP_069860683
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MKEMSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHR
LVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDN
LDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNML
GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL
LEPPNFFQKYRHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF
PGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGM
KIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSSGGCQSKRLSLDSSCLDSSRDTDNG
TPFNSPLSTNKPSKPDSPPGETERTSAEPASIIVEKPLHVPPAQGLSIPVIGAKVDATVK
AVSTPAVCTIPTVVGRNVIPRITTSHNPTQGQPHLNGMSNIAKNLIPKRSHSPSIDGTSK
RLKDIEKFIRLESAFKDPRVAEERTGKSVDTIGGESMPIPTIDTSRKKRLPSKELPDSSS
PVPANNIRVIKNSIRLTLNR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtctgcaaataccatgctggacagccagcgtcaacaaaagcattatgga
ataacttctccaataagtttggcatgtcctaaagaaattgaccatatttacacacagaaa
ttaattgatgccatgaaaccatttggagtgtttgaagatgaggaagaattgaaccacagg
cttgttgttcttggtaaattgaataacttagtaaaagaatggatttctgatgtcagtgag
agtaagaatcttccaccttctgttgtagccactgtgggtggtaaaattttcacatttgga
tcctacagactgggagtacacaccaaaggagctgacattgatgcactgtgtgtagctcca
agacatgtggaaagatctgatttttttcagtctttttttgaaaaactgaagcatcaagat
gggattagaaacctaagagctgttgaagatgcttttgtacctgttataaaatttgaattt
gatggtattgaaattgatctcgtctttgcaagactggcaatacaaactatatcagataat
ttagatctaagagatgactctcgcctcagaagccttgatataaggtgtattcgcagctta
aatggatgcagagttactgatgagattttacatttagtgccaaataaagaaacatttaga
ctcaccctcagagcagtcaaattatgggcaaaacgtcgtggtatttattccaacatgctg
ggtttccttggtggagtctcctgggccatgctagttgccagaacttgccaattgtatcca
aatgcagcagcatcaactttagttcataagttttttttagttttttccaaatgggaatgg
ccaaatcctgtgctcttgaaacagccagaagaaagcaatttgaatttgcctgtctgggat
cctcgggtaaatccatcagatagataccatctcatgcccataatcacccctgcctaccca
caacagaattctacatataatgtatccacatcaactcgaacagtaatggtagaagaattt
aaacaaggtcttgcagttacagatgaaattcttcaagggaaatcagattggtccaaacta
cttgagccaccaaatttctttcaaaaatatagacattatatagtattgactgccagtgca
tcaacagaagaacaccatctagaatgggttggattagtagagtctaaaatccgtgtactt
gttggaaacttggaacggaatgaatttattactcttgcccatgtgaatccccagtcattt
ccaggaaataaggaacaccataaagacaacaattacgtatcaatgtggttcctcgggata
atttttcggagagtagaaaatgcagaaagtgttaacatagacttgacatatgatatacag
tcatttactgatacagtgtacagacaggcaaacaatataaatatgctgaaggatggaatg
aaaattgaagcaactcatgtaaagaaaaaacaacttcatcactaccttccagcagagatt
cttcaaaagaagaaaaagcaaagtctctctgatgtcagtcgaagttcaggtggatgtcaa
tccaaaagattatctctggatagcagttgtctggatagctccagagatactgacaatgga
acaccttttaattctccgttgtctacaaacaaaccttccaaaccagatagccctcctgga
gaaacagaaaggactagtgctgagcctgctagtataattgtggagaagccactgcatgtc
ccaccagctcaaggactatctattccagtcattggtgcaaaggttgacgctacggtaaaa
gctgtatcaaccccagctgtgtgtaccattcctactgtagtaggacgaaatgtcattcct
agaatcacaacatcccacaaccctacccagggacaaccacatctaaatggaatgtcaaat
atagctaagaatcttatacccaaaagatcccattctccgtccatagatggaacttctaag
aggttgaaagatatagaaaagtttattcgacttgaatcagcatttaaggacccccgtgtt
gctgaagagagaacaggaaaatcagtggatactattggaggagaatctatgcctattcca
actattgatacatcacgtaaaaagagactacccagtaaagaactaccagattcatcatct
ccagttccagcaaataacatacgtgttatcaaaaattccattcgattgacccttaatcgg
taa
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