Dipodomys merriami (Merriam's kangaroo rat): 138815658
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Entry
138815658 CDS
T11079
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmer03016
]
138815658
Enzymes [BR:
dmer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
138815658
Transfer RNA biogenesis [BR:
dmer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138815658
Prokaryotic type
138815658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
138815658
NCBI-ProteinID:
XP_069861186
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MGLPGLRAALLTAWGRWAARPGLRAPRLPPMAGNEAPPARTPRQPGRRARGGWVWEEAQP
QPPKRPRGGEDAEPPRKPPKRKIVLLVAYSGKGYHGMQRNVGASQFKTIEDDLVSALVRA
GCIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDKINSHLPSHIRILGL
KRVTGGFNSKNKCDARTYFYMLPTFAFAHKDRDVQDETYRLSTETLQQVNRLLACYTGTH
NFHNFTSQKGPREPSARRYILEMYCEEPFVREGLEFAVIKVKGQSFMMHQIRKMVGLVVA
IVKGYAPESVLERSWGEEKVDVPKAPGLGLVLERVHFEKYNQRFGRDGLHEPLDWTQEEG
KVAAFKEQFIYPTIVSTERDERSMAQWLSTLPVHDFSATALATASTSAKVGLSLKMLAQW
VPSSLEGSDGDGDTD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcccgggcctgcgggcagcgctgctgacggcctggggacggtgggccgcgcgc
cccggcctgcgggcgccccgcctgccgcccatggccgggaacgaggcgccccccgcgcgg
accccgcgccagcccggccggagggcccgcggcggctgggtgtgggaggaggcgcagccg
cagccgcccaagcggccgaggggcggcgaggacgcggagccgccgcggaagccgcccaag
cgcaagatcgtgctgctcgtggcctactcggggaagggctaccacggcatgcagaggaat
gtgggggcctcacagttcaagacaatcgaggacgacctggtgtccgctctcgtccgggcc
ggctgcattcccgagaaccacggcacggacatgaggaagatgtccttccagcgatgtgcc
cgaacggacaagggtgtatctgcagctggtcaggtggtatccctgaaagtatggctgatt
gatgacatcctggacaagatcaacagccaccttccctctcacattcggattctgggactg
aagagggtgactggaggattcaactccaagaacaagtgcgatgccaggacatatttttac
atgctgcccaccttcgcctttgcccataaggaccgggatgtgcaggatgagacctaccgc
ctgagcacggagaccctgcagcaagtcaacaggctactggcctgctacactggcacccac
aacttccacaatttcacctcacagaaggggccaagggagcccagtgcacggcgctacatc
ttggagatgtactgtgaagagccttttgtgcgtgagggcctggagtttgctgttatcaag
gtcaagggccagagcttcatgatgcaccagatccgaaagatggttggcctggtggttgcc
attgtgaagggctacgccccagaaagtgtgctagagcgcagctggggggaggagaaggtg
gatgtccctaaggcacctgggcttggcctggtcctggagagggtacactttgagaagtat
aaccagcgctttggcagggatgggctgcatgagccactggactggactcaggaggagggg
aaggtggcagccttcaaggagcagtttatctatcccaccattgtcagcacagagcgggat
gagaggtccatggcccagtggctgagcaccctgcctgtccatgacttcagtgctactgcg
ctcgcaactgctagcacaagcgccaaggtagggctgagtctcaagatgctggcccagtgg
gtccctagttccctggagggcagtgacggagatggagacacggactga
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