Dipodomys merriami (Merriam's kangaroo rat): 138815752
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Entry
138815752 CDS
T11079
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03022
Basal transcription factors
dmer05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138815752
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
138815752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138815752
03036 Chromosome and associated proteins [BR:
dmer03036
]
138815752
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138815752
Coactivators
SAGA/TFTC/STAGA complex
138815752
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138815752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
138815752
NCBI-ProteinID:
XP_069861229
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAAPAEGAPAAAPEPPPAGRARPAGGGPRRAGPGSPRRPLVPAGPA
PAPAKLRPPPEASAGPCPAAAAAAAVTATAAAAGPEPAAAPPAGPGASKPGPPGPGAAQT
LNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAPAAPSPPAAPAPAAPPPPA
PPAPAAPAAPARPPGHPAAPAPPAPAAAAAAAAQNGAGAAAAAPAPVPAPAAGGAAGLGG
QPGAGAPAQGGKAEPPKTAGPAAGAAAAAAAAGAAGGVLLGPAMPGALPSPAGVPQPAPG
TPAGLPKGAAAAATPSLPRTPSATTTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPG
MVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQSTMAPRPATPTSAPPVQISTVQAPGTP
IIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGSAQTASLGTATAVQTGTP
QRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKI
EAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPASQATTAL
TAVVLSSSVQRTAGKTAASVTSALQPPVISLTQPTQVIQQPPKPGALIRPPQVTLTQTPM
VALRQPHNRIMLTTSQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGG
GSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRMLEI
GKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLK
FFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDAN
LTALAAIGPRKKRKVDCAGPGSGAEGSGPGAAVPGSSGVGAPRQFTRQRITRVNLRDLIF
CLENERETSHSLLLYKAFLK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcccccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggcggg
gggccgcggcgcgcgggccccggctcaccgcgccgcccgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgcccggccgcc
gccgccgccgccgccgtcaccgccaccgccgccgctgcggggcccgagcccgccgccgcc
ccgcccgccggccccggcgcctccaagcccggcccgcccggccccggcgccgcgcaaact
ttgaatgggagcgccgcgccgcccaccgcgccgcacgccgcacctgctgtcagcccggtc
aacaacgggcccgcgccgccgcccgccgccggctccgtcatccaggcggcccccgcgccc
gcgcccgccgcgccctcgccgcccgccgcgcccgcgcccgccgcgcccccgccgcccgcg
ccccccgcgcccgccgcgcccgccgcgcccgcccggccgcccggccaccccgccgcgccc
gcgccccccgcgcccgccgccgccgccgccgccgccgcgcagaacggggccggggccgcc
gccgccgcgcccgccccggtccccgccccggccgccgggggcgccgcggggctcggcggg
cagccgggggccggcgcgcccgcgcaggggggcaaagccgagccgcccaagaccgcgggg
ccggcggcgggcgcggcggcggcggcggcggcggcgggcgcggcgggcggcgtgctgctc
gggcccgccatgccaggggcgctgcccagccccgccggcgtcccgcagcccgcgcccggg
accccggcggggctgcccaagggcgccgccgccgccgcgacgcccagcctgccccggacg
ccctcggccaccaccaccggcgggatccgcgccaccctgacgcccaccgtgctggcgccc
cgactgccgcaaccgccgcagaacccgaccaacatccagaacttccagctgcccccaggg
atggtcctcgtgcggagtgagaatgggcagctgttaatgatccctcagcaggccctggct
cagatgcaggctcaggcccatgcccaggcccagccacagagcaccatggctccgcgccct
gccactcccacaagtgcccctcctgtccagatatccaccgtacaggctcctgggacacct
attattgcacggcaggtgaccccaactaccataattaagcaagtgtctcaggctcagaca
acggtacagcccactacaaccctgcaacgctccccgggggttcagcctcagcttgttctg
ggtggctctgcccagacagcctctcttgggacagcaacagctgttcaaacaggaacacct
cagcgaacggtcccaggggccaccaccacctccacagctgccacggaaactatggaaaac
gtgaagaaatgtaaaaattttctatctacgttaataaaactggcctcatctggtaaacag
tctacagagacagcagctaatgtgaaagaactagtgcagaatttactggatggaaaaatt
gaagccgaagattttactagcaggttataccgagaacttaattcttcacctcaaccttac
cttgtgcctttcctgaagaggagcttacccgccttgagacagctgacccccgactccgcg
gcctttatccagcagagccagcagcagccgccaccagcctcgcaggccaccaccgcactc
acagccgtggtgctgagcagctcggtgcagcgcacagccgggaagacggctgcctcagtg
accagcgccctccagccccctgtcatcagcctcacgcagcccacacaggtgatccagcag
ccccccaagcctggagccctgatccggcccccgcaggtgaccttgacgcagacgcccatg
gtcgcactgcggcagcctcacaaccggatcatgctcaccacatctcagcagatccagctg
aaccagctgcagccagtccccgtggtgaaacccaccgtgttacctggaaccaaagccctt
tctactgtctcggcacaagctgctgctgcacagaagaacaagctcaaggagcctggggga
ggttcgtttcgggatgatgatgacatcaatgatgttgcatcgatggctggagtaaacctg
tcagaagaaagtgcaagaatactggccacaaactctgagttggtggggacgctaacccgg
tcctgtaaggatgacaccttcctgctccccgcacccttgcaaaggaggatgttggaaatc
ggtaaaaagcacggcataactgaattgcacccagatgtagtgagttatgtgtcccacgcc
acgcagcagaggctacagaatcttgtagaaaaaatatctgaaacggctcagcaaaaaaac
ttctcttacaaggatgatgacagatatgaacaggcaagtgatgtccgggctcagctcaaa
ttttttgaacaacttgaccagattgaaaagcagagaaaagacgagcaggagagggagatc
ctgatgcgggcggccaagtctcgatccagacaagaagatccagaacaattaaggttgaag
cagaaggcaaaagagatgcagcagcaggagctggcacaaatgcgacagcgagatgccaac
ctcacagcactggcggccattgggcccaggaaaaagaggaaagtggactgtgcggggcca
ggatcaggagcagagggctcaggccccggcgcggcagtcccaggcagctccggcgtgggc
gcccccaggcagttcacacggcaaagaatcacccgggtcaacctcagggacctcatattt
tgtttagaaaatgagcgcgagacaagccattcactgttgctctacaaagcattccttaag
taa
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