KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138815965
Entry
138815965         CDS       T11079                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138815965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmer03019]
    138815965
   03036 Chromosome and associated proteins [BR:dmer03036]
    138815965
Messenger RNA biogenesis [BR:dmer03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     138815965
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     138815965
    COMPASS/SET1 complex (yeast)
     138815965
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_EIPR1 VPS8_N Beta-prop_NUP159_NUP214 MinC_C
Other DBs
NCBI-GeneID: 138815965
NCBI-ProteinID: XP_069861486
LinkDB
Position
Unknown
AA seq 313 aa
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgaccgacagcgtgctgcggagcttccgcgtcgccaaggtgttccgcgagaac
tcggacaagatcaactgcttcgacttcagccccaacggcgagaccgtcatctccagcagc
gacgacgactccatcgtgctgtacgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaaatatggcgtagacctcatcagatacacgcatgcagcaaacacggttgtttac
agctctaacaaaatagatgataccatacgttacttgtccttacatgacaacaaatatatc
agatactttccaggacatagcaaaagggtggtggccttgtccatgtcacctgtggatgac
actttcatatctgggtctcttgataagaccatccgactctgggatctccggtctcctaac
tgccagggtctcatgcatctacagggcaagccagtttgttctttcgatccagaagggtta
atttttgctgccggtgtcaactctgaaatggtcaaactttatgatcttcgttcttttgat
aagggaccgtttgcgacctttaagatgcagtatgatcggacttgtgaatggacagggctt
aaattcagcaatgatggcaaactcatactcatctccaccaatggcagcttcattcgcctc
atcgatgcgttcaagggtgtggtgatgcacacgtttgggggttatgccaacagcaaagct
gtcacgctggaggcttcgtttactccggactcccagttcatcatgatcggttctgaagat
ggcaagatccacgtgtggaatggagagagtggcataaaagtagctgtattggatggcaaa
cacacaggccccattacctgtttgcagttcaacccgaagttcatgacctttgccagcgcc
tgttccaacatggccttctggttgcccaccattgatgactga

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