Dipodomys merriami (Merriam's kangaroo rat): 138816043
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Entry
138816043 CDS
T11079
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04360
Axon guidance
dmer04724
Glutamatergic synapse
dmer04726
Serotonergic synapse
dmer04929
GnRH secretion
dmer04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
138816043 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
138816043 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
138816043 (Trpc1)
04726 Serotonergic synapse
138816043 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
138816043 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmer04040
]
138816043 (Trpc1)
Ion channels [BR:
dmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138816043 (Trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
DUF6779
RIN1
Motif
Other DBs
NCBI-GeneID:
138816043
NCBI-ProteinID:
XP_069861664
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MMAALYPSTDLSGLPSPSPPSSPSSSSPSPHEVMALKDVREVKEENTLHEKLFLLACDKG
DYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAI
DSEVVGAVDILLNHRSKSSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTML
LKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAF
ELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKR
GLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLMVG
IFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGP
ALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHN
KFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFG
KFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYI
FSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDK
EWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLK
EWRNLKQKRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDL
LGFRTSKYAMFYPRN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtaccccagcaccgacctgtcgggcctcccctccccgtccccgccg
tcctccccgagctcctcctcgccgtcgccccacgaagtcatggcgctcaaggatgtgcgc
gaggtgaaggaggagaacaccctccacgagaagctcttcctgctggcgtgcgacaagggt
gactactatatggttaaaaagattttggaggaaaacagttcaggggacttgaacataaat
tgcgtagatgtgcttgggaggaatgctgttaccataactattgaaaacgaaaacttggat
atactgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatc
gactctgaagtagtgggagctgttgatatacttctaaatcatcgatcaaaatcatcatca
agaccaactatagtaaaactaatggaacgaattcagaaccctgagtattcaacaactatg
gacgttgcacctgtcattttagctgctcatcgtaacaactatgaaatccttaccatgctg
ttaaagcaggatgtgtctctccccaagccgcatgctgttggctgtgagtgcacattgtgt
tctgcaaaaaacaaaaaggacagtctccgacattccaggtttcgtcttgatatatacaga
tgtttggccagtccagctctgataatgctaacagaagaagatccaattctgagagcattt
gagcttagtgctgacttaaaggaactcagtcttgtggaggtggaattcaggaacgattat
gaggaactagctcgacaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaat
tcacgtgaattggaagtcatcctaaaccatacatctagtgatgaacctcttgataaacgg
ggactgctagaagaaagaatgaatttaagccgtctaaaactggctatcaaatataaccaa
aaggagtttgtctcccagtccaactgccagcagttcctgaacacagtttggtttggacaa
atgtcgggttatcgtcgtaagcccacctgtaagaagataatgactgtcttgatggttggc
atcttttggccagttttatcactgtgttatttgatagctcccaaatctcaatttggaaga
atcatccacactccttttatgaaatttattattcatggagcctcgtacttcacattcctg
ctgttattaaatctgtactctcttgtctacaatgaggataagaaaaacacaatggggcca
gcccttgaaagaatagactaccttcttattctgtggattattgggatgatttggtcagac
attaaaagactctggtatgaaggattggaagactttctagaagaatctcgaaatcagctc
agctttgtcatgaattccctgtatttggccacctttgctctcaaggtggtagctcacaac
aagtttcatgacttcgctgatcgcaaggactgggatgccttccatccgaccctggtggca
gaagggctgtttgcctttgcaaatgtgctgagttatctccgtcttttttttatgtatacc
accagctctgtcctgggtcccttacagatttctatgggacaaatgttgcaagattttgga
aaatttctcgggatgttccttctcgttttgttttccttcacaattggactgacacaactc
tatgataaaggctacacaccaaaagaacagaaggactgtgtgggcatcttttgtgaacag
caaagcaatgatactttccattcgttcatcggcacttgctttgctctgttctggtatatt
ttctccctagcccatgtggcaatctttgtcacaaggttcagctatggagaagagctgcag
tcctttgtcggcgccgtgattgttggcacttacaacgttgtggttgtcatcgtccttacc
aagttgctggtcgccatgcttcacaaaagctttcagttgatagcaaatcatgaagacaag
gaatggaagttcgcccgagcaaaactatggcttagctactttgatgacaagtgtacactt
ccgccacccttcaacatcattccttcaccaaagaccatctgctacatgatcagcagcctc
agtaagtggatttgctctcacacttcaaaagggaaggtcaagcggcaaaacagtttaaag
gaatggagaaacttgaaacaaaagagagatgagaactaccagaaagtgatgtgctgctta
gtgcatcggtatttgacctccatgagacagaggatgcagagcacagatcaggccactgtg
gagaacctaaatgagctgcgccaagacctgtccaagttccggaatgaaataagggatttg
cttggctttcggacttctaaatatgctatgttttatccaagaaattaa
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