Dipodomys merriami (Merriam's kangaroo rat): 138816172
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Entry
138816172 CDS
T11079
Symbol
Aqr
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138816172 (Aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138816172 (Aqr)
Spliceosome [BR:
dmer03041
]
Complex B
Other components
Prp19-related factors
138816172 (Aqr)
Complex C
138816172 (Aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
SLFN-g3_helicase
DEAD
AAA_16
Parvo_NS1
UvrD_C_2
AAA
DnaB_C
PhoH
DUF4088
AAA_22
NB-ARC
ATPase
Motif
Other DBs
NCBI-GeneID:
138816172
NCBI-ProteinID:
XP_069861822
LinkDB
All DBs
Position
Unknown
AA seq
1476 aa
AA seq
DB search
MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFQ
FFFKRILTAALAETDGDFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWLSLQP
ARLELELKKTPKLRKFWNLIRKNDEKMSEEAREQAYRERRFLSQLIQKFISVLKSIPLSE
PVTMDKVHYCERFLELMIDLEALLPTRRWFNTVLDDSHLLVHCYLSNLVRREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
TRESLVRLFSPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ
LNRMPLYPTERIAWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTSTIQNGTEDVYDTFNVIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQISTLDFNDTFLS
IEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDSNGDNEDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYMSRVKSKGGTLPE
VAEVAACFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADRISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
TQLTARPLHLHIIPTEPFPTARKNGERPPHEVQIIKNMPQMANFVYNMYMHLIQTTHHYQ
QTFLQLPPAMVEEAEEVQTPDVELETEEEALAAQGDIIPSPTDASSSKETLAPQPEEPPC
QAEADSAPVAGGPSQGPAEPRLDPPANPSEEGASKD
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgcgcagcccaagaagatcgtggccccgacggtgtcccagatcaacgcg
gagttcgtgacccagttagcctgtaagtactgggcgccccacatcaagaagaagtctcct
tttgatataaaggttattgaagatatatatgagaaggagatcgtcaaatcaaggtttgcc
atcagaaagataatgctgctggaatttagccaatacctcgagaactatctctggatgaat
tattctccagaggtgtccagcaaggcctacttgatgtccatctgctgcatggtgaacgag
aagttcagagaaaacgtccctgcgtgggagacgtttaagaagaagccagatcacttccag
ttctttttcaagcgcatcctgacagcggcgctggccgagacggacggcgacttctccctc
cacgagcagacggtgctgctgctgttcctggaccactgcttcaacagcctggaagtggac
ctgatccgaagccaggttcagcagctcatctccctccccatgtggctgagcctgcagccc
gcacggctggaactggaattaaagaagacacctaagctcaggaaattctggaacctgatt
agaaagaatgatgagaagatgtctgaggaagcgagggaacaggcctaccgagaaaggaga
tttctttcacagctcatccagaagttcatctccgtgctgaagtcaatcccactttctgag
cctgtcacaatggacaaagttcattactgcgagcggttcctcgagctgatgatcgatctg
gaggccctgctccccaccaggcgctggttcaacaccgtcctggacgactcccacctcctg
gttcactgctacctgtccaacctcgtgcgcagggaggaggacggccacctcttctcccag
cttttagacatgcttaagttctataccgggtttgagattaatgaccagacgggaaatgcg
cttactgagaacgagatgaccacaattcactacgaccgaatcacttccctgcagagagcc
gcctttgcacacttcccagagctctacgacttcgccctctccaacgtggcagaagtggac
acgcgcgagtccttggtccggctcttcagccccctaagttccaacactctccaccaggtg
gcatcatacctctgcttgttaccaacccttcctaagaacgaagacaccacctttgataaa
gaatttcttctggaattgctggtctctcgccacgagcgccggatctcccagattcagcag
ctgaatcggatgcccctgtacccaacggagagaatcgcatgggacgagaacatcgtccca
accgagtactactctggggaaggttgccttgctcttcccaagttgaatttgcagtttctg
actctacatgactacctcctgaggaatttcaacctcttccgcttagaatccacatatgaa
attcgtcaggacatcgaggacagcgtcagcagaatgaagccatggcagtctgagtatggt
ggtgttgtgtttggtggttgggcacgaatggcccagcccattgtggctttcacggtcgtc
gaggttgccaaacccaatatcggtgagaactggccaacccgggtccgagcagacgtcacc
atcaacctcaatgtccgagaccacatcaaagacgagtgggaaggtctccgtaaacacgac
gtatgctttttaattaccgtgcgtcccacaaaaccttatgggaccaaatttgaccggagg
cgaccttttatcgagcaggttggcctggtttatgtccgcggctgtgagatccagggcatg
ctagatgacaaaggacgcgtcatcgaggacggaccagaacccagacccaatcttcgaggg
gagtccaggacgtttagagtatttttagaccccaaccagtaccagcaggacatgaccagc
acaatccagaatggaacggaggatgtgtacgacacgttcaacgtgatcatgaggaggaaa
cccaaggagaacaacttcaaggcggtgctggagaccatacggaacctgatgaacaccgac
tgtgtggtgcctgactggctgcacgacatcattctgggctatggggacccgagcagcgcc
cactactcaaaaatgcccaaccagatctccacccttgacttcaacgacacctttctctcc
atcgaacacttgaaggccagctttcccggccataatgtcaaagtgactgtggacgacccc
gctctgcagatccccccgttcaggataacgttcccagtacgaagtggaaaagggaagaaa
aggaaagattccaatggggacaacgaagacaccgaggaagcaaaaactctgattgtggag
cctcacgtcatccctaaccggggcccgtacccttacaaccagcccaaacgcaataccatt
cagttcactcacacgcagatagaggccatccgtgcaggaatgcagcccgggctgactatg
gttgtaggcccacctggcacaggaaaaacagacgtggccgtccagatcatctccaacatc
taccacaacttccccgagcagaggactctgattgtcactcattccaaccaggccctaaac
cagttgtttgagaaaattatggctttggacattgacgagcgccacctgctgcgtcttggt
cacggagaagaagagctggagacagagaaggacttcagcaggtatgggagagtaaattat
gtcctggctcgaagaatagaacttttggaagaagtcaagcgattgcagaagagcctgggg
gttcctggagatgcttcgtacacctgtgagactgcggggtatttcttcttgtatcaggtg
atgtctcgctgggaggagtacatgagcagagtgaagagcaaagggggcacactgcccgag
gtggccgaggtggccgcttgcttccctttccacgagtactttgccaacgcacctcagcct
atctttaaaggcagatcttacgaggaagacatggagattgctgagggatgcttcaggcat
attaagaagatcttcacgcagcttgaggagttcagagcctccgaactgcttcgcagtggc
ctggacagatccaagtaccttctggtgaaggaagccaaaatcattgctatgacctgcacg
cacgctgccttaaaacgacacgacctggtcaagttaggcttcaagtatgacaacatttta
atggaagaggccgctcagattctggaaatagaaacctttataccacttcttctgcagaac
ccgcaggatggctttagtcgactgaaacgatggatcatgattggtgaccaccaccagctg
ccccccgtcatcaagaacatggcctttcagaagtactccaacatggagcagtccctcttc
acccgctttgtgcgggtcggggttcctactgtggacctcgatgcacaagggagagccagg
gccagcctgtgcaacctgtacaactggcgatacaagaacctagggaacttaccccacgtg
cagctcttgccggagttcagtaccgcaaacgctggcttgctctatgacttccagctcatc
aacgtggaggatttccagggagttggagagtcggaaccaaatccgtacttttaccagaac
ctcggggaggcagagtacgtggttgcgctgttcatgtacatgtgcttgctaggctacccg
gcagacagaatcagtattctaactacatacaacgggcagaagcaccttatccgcgacatc
atcaacagacggtgtgggaataacccgctcatcgggaggccaaacaaggtgactaccgtg
gatagatttcaaggccaacagaatgactacatcctactgtctttagtgcggaccagggca
gtgggccatctaagggatgtccgtcgcttagtggtggccatgtccagagcccgactcggg
ctctacatcttcgccagagtctccctcttccagaactgcttcgaactgaccccagctttc
acacagctcaccgcccgcccgctccatctgcacatcattcctacagagccgttcccaaca
gccaggaagaatggagagaggccacctcatgaagtacagatcataaagaacatgcctcag
atggcaaactttgtgtacaacatgtacatgcatttgatacagaccacacatcactaccaa
cagaccttcttacaactgccacctgccatggtagaagaagctgaggaggttcagacccca
gacgtggagttggaaactgaggaagaggccttggctgctcaaggtgacatcatccccagc
ccaacagatgccagctccagcaaggagaccctggcccctcagcccgaggagcccccctgt
caggcagaagccgactctgctcctgtggcaggaggcccctcccagggtcccgccgagccc
cgactggaccccccagctaacccttctgaggagggggcgtccaaggactaa
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integrated database retrieval system
