Dipodomys merriami (Merriam's kangaroo rat): 138816236
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Entry
138816236 CDS
T11079
Symbol
Rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138816236 (Rpap1)
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
138816236 (Rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
138816236
NCBI-ProteinID:
XP_069861946
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MLSRPKPGESEVDLLHFQSQFLATGAAPAVQLVKKGSRRGGNADLEDHRDVVMLDDLPDS
PPALVPAPPKRARPSPGRPLPQDEDPEERLNRHDQHVTAVLTKIIERDTSAMAVNLPVPS
SVAFPPVFHRSQDRQGKPASGKGSIFAREIAARRASEGRPPSAREVVPNPYPPQGVVTCE
APSPRDQGGQRPGNNHNFQRPHVVTGKGLSQEAEQEAQTIHEENVARLQAMTPGEILQEQ
QQLLAQLDPSLVAFLRSRGHTHEQAGEKATKEQKPGGQFIDVSEEEPMMSALATEPRKEE
KLEPGAPDVALPMTPHKEWLHMDAVELEKLHWTQDLPPLRRQQTQERMQARFSLQGELLA
PDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLSQVIGRAQAGEFG
DQLVGSVLRLLLDAGFLFLLRFSLDDRVDGVIAAAVRALRALLVAPGDEELLDSTFSWYH
GTSVFPLMPSQEDKEEDGEDEEPATEKAKQKSPEEGSRPPPDLARHDVIKGLLATNLLPR
LRYVLEVTCPGPSVVLDILAVLIRLARHSLESATRVLECPRLIETIVREFLPTSWSPVAA
GPTSSLHRVPCAAAMKLLRVLASAGRNIAARLLSSFDLRSRLCRFIAEAPQELALPPEEA
EMLSTEAYRLWAVAASYGHGGDLYRELYPVLMRALQAVPLELSIHPLPSLPVHRAASLLT
LLTQLTLAASGTHSEPTRDSAEARGPAAASSITWTQVSGLQPLVEPCLRETLKLLSAPDR
WSALGPVPTACLLFLSAYYQAWSQQPNLCPEDWLQDMERLSQELLLPLLSQPTLVSLWDS
VRHCSPVCNPLSCAPAAEVLSSLVALGCPGGCPPRSLAGSASPFPFLTALLHLANTLART
HKGLCGQLASLLAAPGLQSYFLQCVAPGAAPHLTPFSAWAFRHEHHLQYLAISLAQKAAM
LQPPPATNAALFHAMALALLSRLLPGSEYIAQELLLSCVFRVEFLPEGAAGGPEAADLAD
GLSLGSSGDARCGRGALLIQACQDLPSIRSCYLTHCSPPHAGLLASQACHRGETQRVPAL
LLPVPMEPLLPTDWPFQPLIHLYHRASETPSGLPPADTVGIATRVLQWVLVLDSWRPEAL
CAVPPAARLARLMCLFLVDSELFRETPVQRLVAALLARLCRPQVLPSLNLDCPLPGLTSF
PDLYASFLDHFESVSFGDHLFGALVLLPLQRRFSVTLRLSLFGDHVGALRALGMPLTQLP
VPLECYTAPPEDNLPLLQLYFRALVTGALRSHWCPVLYTVAVAHVNNFMFSQDPKSSDEV
KGAQKNMLQKTSLLADEALRQHLLHYKLPSPSLPQGFELYSQLPPLRQQHLERLTSGLLQ
SRVPET
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccagaccaaagccaggggagtccgaggtggacctgctgcacttccagagtcag
tttcttgccactggcgcagccccggctgtgcagttggtgaagaaaggcagcaggagaggt
ggaaatgctgacctggaggatcatcgggatgtggtgatgctggatgacctcccagattct
cccccagctttagttcctgctccccctaagagagccaggcccagccctggccgccctctg
cctcaggatgaagaccctgaagagaggctgaacaggcatgaccagcacgtgacggctgtc
ttgactaaaattattgaacgagatacaagtgcaatggccgtgaatctgcctgtgcccagc
agtgttgctttcccccctgtattccatcgctcacaagacagacagggaaagccagcatct
ggtaagggaagcatctttgcccgggagatcgcggcaaggcgggcttctgaaggcaggcct
ccatccgccagagaagttgtacccaacccatacccaccacagggtgtggtgacctgtgag
gcacccagccccagagaccagggtggccagcggccagggaacaaccacaacttccagaga
ccccatgtggtcacagggaagggcctcagccaggaagccgagcaagaagctcagaccatc
catgaagagaatgtagcaagactgcaagccatgactcctggcgagatcctgcaggagcag
cagcagctcctagctcagcttgaccctagcttggttgccttcctgagatcccgtggccat
acccatgagcaagcaggagagaaggccaccaaggagcagaagccaggaggacagttcatt
gatgtctctgaagaggagcccatgatgtcggcccttgccactgaacccaggaaggaagag
aagctggagccaggggccccagatgtggccctgcccatgaccccccataaagaatggctc
cacatggacgctgttgagctggagaagctccactggacccaggacctgcccccactccgg
cggcagcagacccaggagagaatgcaggcccgatttagtcttcagggcgagctcctggcc
cctgacgtggacctgcccacgcatctggggctgcaccaccatggagaggaggcggagaga
gcagggtactccttacaggagctgttccacctgacccggagccaggtgtcccaacagaga
gcactcgccctgcatgtgttgtcccaggtcattggcagggcccaggctggcgagtttggg
gaccagctggtgggcagtgtcttacggctgcttttggatgctggcttcctcttcctgctg
cgtttctccttggatgacagagtggatggggtgatcgcagctgccgtccgggctcttcgg
gctctgctggtggctcccggagatgaggagctcttggacagcaccttctcttggtatcac
ggaacttcggtgttccccctcatgcccagccaggaggacaaggaggaggatggcgaggat
gaagagcccgcaacagaaaaggcaaaacagaagagccccgaggagggaagccgacctccg
cctgacctggcccgacatgacgtcatcaagggcctcctggctaccaacttgctgcctcgg
ctgcgctatgtgctagaggtgacctgcccagggccctctgtggtccttgacatcctggct
gtgctcattcgcctggcccgccattccttggagtccgccacgagggttctggagtgccct
cggctgatagaaaccatagttcgagagttcctgcctaccagctggtcccctgtagcggcg
gggcccacctccagtctacacagagtaccctgtgctgctgccatgaaactacttagagtc
ttggcctcggctggtaggaatattgccgcccggctgttgagcagctttgatctccggagc
cgcctgtgccgcttcatagcagaagctcctcaagaactggccttgccccccgaggaagct
gagatgctgagcacggaggcctatcgcctgtgggctgtggctgcctcctacggccacgga
ggtgacctttacagggagctgtacccggtgctcatgagggccttgcaggctgtgccgctg
gagctcagcatccaccccctgccgtccctgcccgtgcaccgggcggcctcgctgctcacc
ctcctcacccagctcactctggcagccagcggcacccactctgagcccaccagagactcc
gctgaggcccgggggccagccgctgcttcctccatcacgtggacgcaggtatctggactc
cagcctctcgtggagccatgtctaagagagaccttgaaactgctgtccgcgcctgatagg
tggagtgccctgggcccggtgcccaccgcctgcctgctgttcctgagtgcctactaccag
gcctggagccagcaaccaaacttgtgccccgaggattggcttcaggacatggagcgcctg
tcccaggagctgttgctgccactgctgagtcagcccaccctggtcagcctgtgggactcc
gtcaggcactgctctcctgtctgcaacccactgtcctgtgctccagcggccgaagttctc
tccagccttgtggcgctgggctgccccggaggctgtcccccacgcagtctggctgggtca
gcctcccccttcccattcctcactgccctcctccatcttgccaacaccttggcccggacc
cacaagggactatgtggccagctggcatctctattggctgcccccggactccagagctac
ttcctccagtgtgtggctcctggcgctgccccccacctcacacccttctctgcctgggcc
ttccgccatgagcatcacctgcagtacctggccatttccctggcccagaaagcggcaatg
ctgcagccaccaccggccaccaatgcggccctctttcatgccatggccttggccctgctg
agccgcctgctgcccggaagtgagtacatcgcccaggagctgctgctgagctgtgtgttc
cgggtggagttcctcccggaaggtgcagcagggggtccagaggcagctgacctcgctgat
ggactgtccctggggagcagcggggatgcccggtgtgggcgaggggctctcctcattcag
gcctgccaggacctccccagcatccgcagctgctacctgacccactgctctccgccccac
gccggcctgctggcctcccaggcctgtcaccgaggagagacgcagcgagtcccagccctg
ttgctgcctgtgcctatggagccgttgctgcccaccgactggcccttccagcctttgatt
catctctaccaccgggcttcagaaacaccctcggggctccctccggctgacacggtgggc
atagccacgcgcgtcctgcagtgggtgctcgttctggacagctggcgtcccgaggcctta
tgcgcagtacctcctgctgcccgcctggcacggctcatgtgtttgttcctggtggacagt
gagctattccgagagacgccagtacagcgtctcgtggcagcccttctagctcgcctctgt
cggccccaagtcttgccgagcctcaacctggactgcccgcttcctggtctgacgtctttc
cccgacctctatgccagcttcctggaccattttgaatccgtgtcttttggggaccacctg
tttggagctctggtcctccttcctctgcagcgccggttcagtgtcaccttgcgcctctcc
ctctttggggatcacgtgggagccttgcgggctctgggcatgcccctgacccagttgcct
gtgcccctggagtgctacacagcacctcccgaagacaacctgcccctccttcagctctac
ttccgggccctggtcactggtgccctccgatcacattggtgccctgtgctctacaccgtg
gctgtggctcatgtcaataatttcatgttctctcaggacccaaagagttcagatgaggtg
aagggtgctcagaagaatatgctgcagaaaacttctctgctggcagatgaggctctccgg
cagcacctcctccactataagctccccagtcccagcctcccgcagggctttgagctgtat
tcacagctgccccctctgaggcagcagcacctcgagagactgacctcagggcttctccag
agtagagtaccagagacctag
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