KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138816478
Entry
138816478         CDS       T11079                                 
Symbol
Csf1
Name
(RefSeq) macrophage colony-stimulating factor 1 isoform X1
  KO
K05453  macrophage colony-stimulating factor 1
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04010  MAPK signaling pathway
dmer04014  Ras signaling pathway
dmer04015  Rap1 signaling pathway
dmer04060  Cytokine-cytokine receptor interaction
dmer04061  Viral protein interaction with cytokine and cytokine receptor
dmer04151  PI3K-Akt signaling pathway
dmer04380  Osteoclast differentiation
dmer04640  Hematopoietic cell lineage
dmer04668  TNF signaling pathway
dmer05010  Alzheimer disease
dmer05022  Pathways of neurodegeneration - multiple diseases
dmer05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    138816478 (Csf1)
   04014 Ras signaling pathway
    138816478 (Csf1)
   04015 Rap1 signaling pathway
    138816478 (Csf1)
   04668 TNF signaling pathway
    138816478 (Csf1)
   04151 PI3K-Akt signaling pathway
    138816478 (Csf1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    138816478 (Csf1)
   04061 Viral protein interaction with cytokine and cytokine receptor
    138816478 (Csf1)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    138816478 (Csf1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    138816478 (Csf1)
 09160 Human Diseases
  09163 Immune disease
   05323 Rheumatoid arthritis
    138816478 (Csf1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    138816478 (Csf1)
   05022 Pathways of neurodegeneration - multiple diseases
    138816478 (Csf1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:dmer04052]
    138816478 (Csf1)
Cytokines and neuropeptides [BR:dmer04052]
 Cytokines
  CSF and other factors
   138816478 (Csf1)
SSDB
Motif
Pfam: CSF-1
Other DBs
NCBI-GeneID: 138816478
NCBI-ProteinID: XP_069862345
LinkDB
Position
Unknown
AA seq 558 aa
MTARGAAGRCPPTTWLGPGLLLICLLVSRSIAKEVSVHCSHTIREGHLELLQQLIDSQME
TSCQIAYEFVDQEQLEDPVCYIKKAFFLVQDIMEDTMRFKDNTPNAIAMRGLQELFVELQ
SCFTKDYKDHDKACVRTFHETPLQLLEKIKNVFNETKNLLENDWNIFSKNCNNSFAKCSS
QDVVTKPDCNCLYPNATPSSDPASASPQQPLTPSIAPVADLTWADSEGTEGSSLLPSEQP
LRTVDPGTAKQRPPRSTCQSLESPETPSLDNSPIEDSPQPHPPAEGPTRGVEDLLDSELG
TNWVLEEASGKADEDLVPREAKLSPAGPVGGSILAEPARSSLLLTASSPLPTSTEDQQPA
DVPDIPLPKVDPMRPSGQAHNHTLEKTDGSSALTRDHQRSQGPSSPRMSSLRPQTPNNPA
TLSAQTQPPRSHSWGIVLPLGELEGKRSTRDRRSPAELEGGQASEGADRLQARFNSVPLT
AAGHERQHSGSSDSQLPVFVFRLLVPSIILVLLAVGGLLFYRRRRRSHGEPQTLDFPLGH
PEGSPLTQDEGRQVELPV
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaccgcgcggggcgccgccgggcgctgccctcccacgacatggctgggccctggactg
ctgctgatctgtctcctggtaagcaggagtattgccaaggaggtgtcagtgcactgtagc
cacacaattagggaaggacacctggagttactgcaacagctgattgacagtcagatggag
acttcatgccagattgcatatgagtttgtagaccaagagcagttggaagatcccgtgtgc
tatattaagaaggcatttttcctggtacaagacataatggaggacaccatgcgcttcaaa
gacaacaccccgaatgccattgccatgcgggggcttcaggaactttttgtggagctacag
agctgttttactaaggattataaagatcatgacaaggcctgtgtccgaactttccacgag
actcctctccagttgctggaaaagatcaagaatgtatttaatgaaacaaagaatctcctt
gaaaatgactggaatatttttagcaagaactgcaacaatagctttgcaaagtgctctagc
caagatgtggtgaccaagcctgattgcaactgcctgtaccctaacgccacccctagcagt
gacccggcctctgcctcccctcaacagcctctcaccccctccattgcccctgtggctgat
ttgacctgggctgattctgaggggacagagggaagctccctcctgcccagtgagcagccc
cttcgcacagtggacccaggaactgccaagcagcgaccacccaggagcacctgccaaagc
cttgaatcaccagagaccccaagcctggacaacagccctatagaggattcaccacagcct
caccctcctgctgagggccccacccgtggagtagaggaccttcttgactctgaattggga
actaactgggttctagaagaagcctctggaaaggccgatgaagatttggtgcccagggag
gcaaagctttcccccgctgggccagtagggggcagcatcctggcagagcctgccagatcc
agcctcctcctcacagcatcttctccgctccccacatcaacagaagaccaacagccagca
gatgtaccagacattcccttgcccaaggtggaccccatgagaccctctggccaggcccac
aatcatactcttgagaagacagatggttcatctgccctgaccagagaccaccagagatca
caggggccaagctctccccggatgtcttcactacgcccccaaacccccaacaaccctgcc
accctgtctgctcagacacagcctcccagaagccactcttggggcattgtgctgcccctt
ggggaactggagggcaaaaggagcactagggaccggaggagccctgcagagctggaagga
ggacaagcaagtgagggggcagacagactccaggcccgttttaactccgttcctttgact
gctgcaggccatgagaggcagcactcaggatcctctgactcccagctccccgtgtttgtc
ttccgccttctggtgcccagtataatcctggtcttgctggctgtcggtggcctcctgttc
tacaggcggagacggaggagccatggagagcctcagacattggattttcctttagggcac
ccagagggcagccctctgacccaagatgagggaagacaggtggaactgcccgtgtag

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