Dipodomys merriami (Merriam's kangaroo rat): 138817172
Help
Entry
138817172 CDS
T11079
Symbol
Rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138817172 (Rnf115)
04121 Ubiquitin system [BR:
dmer04121
]
138817172 (Rnf115)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138817172 (Rnf115)
Membrane trafficking [BR:
dmer04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
138817172 (Rnf115)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138817172 (Rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
HypA
zf-Nse
DZR_2
C1_2
DUF7560
Rad50_zn_hook
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
138817172
NCBI-ProteinID:
XP_069863663
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MAEASAAGADAGAAVATHRFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGG
SRIDNSTSTHFAELWGHLDHTMFFQDFRPFLSNNPLDHDNRGNERGHQTHTDFWGPSRPP
RLPVTRRYRSRGSTRPDRSPAIEGIIQQIFAGFFANSTIPGSPHPFSWSGMLHSNPGDYA
WGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVEMGLECPVCKEDYTVEE
AVRQLPCSHLFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQNSEASASNRFSSDSQLH
DRWTF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcttcggcggccggggccgacgctggcgccgctgtggccacgcaccgcttt
ttctgccacttttgcaagggcgaggtcagccccaaactaccggaatatatatgtcccaga
tgtgaatcaggctttattgaagaagtgacagatgattccagttttttaggtggtggtggc
agccggatagacaatagcacatcaacacattttgccgagctctggggccatttggatcac
acaatgtttttccaagattttagaccatttttaagtaacaacccactggaccacgataac
agaggcaatgagaggggtcaccaaactcacactgacttctgggggccaagtcgacctcca
aggctgccagtgactcggagatacaggtctcggggaagtactcgtcctgatagatctcca
gctattgaaggaataatacaacagatctttgcaggattctttgcaaattctacaattcct
ggatctccccaccctttttcttggagcgggatgctgcactccaaccctggggactatgcc
tggggtcagacagggcttgatgccattgtaacccagcttttaggacaactggaaaataca
gggcctccaccagccgacaaggaaaagatcacatctcttccaacagtgacagtaactcag
gaacaagttgagatgggcctagaatgtccagtatgcaaagaagactacacagttgaggag
gcagtccggcagcttccctgcagtcacctcttccacagcagctgtatcgtgccgtggcta
gaactgcatgacacgtgccccgtatgtaggaagagcttaaatggtgaggactctactcgg
caaacccagaactctgaggcctctgcaagcaacagatttagcagtgacagccagctacat
gaccgatggactttctga
DBGET
integrated database retrieval system
