Dipodomys merriami (Merriam's kangaroo rat): 138817337
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Entry
138817337 CDS
T11079
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04064
NF-kappa B signaling pathway
dmer04514
Cell adhesion molecules
dmer04668
TNF signaling pathway
dmer04670
Leukocyte transendothelial migration
dmer04933
AGE-RAGE signaling pathway in diabetic complications
dmer05143
African trypanosomiasis
dmer05144
Malaria
dmer05417
Lipid and atherosclerosis
dmer05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
138817337 (Vcam1)
04668 TNF signaling pathway
138817337 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138817337 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
138817337 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
138817337 (Vcam1)
05143 African trypanosomiasis
138817337 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
138817337 (Vcam1)
05418 Fluid shear stress and atherosclerosis
138817337 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
138817337 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dmer04515
]
138817337 (Vcam1)
04090 CD molecules [BR:
dmer04090
]
138817337 (Vcam1)
04091 Lectins [BR:
dmer04091
]
138817337 (Vcam1)
Cell adhesion molecules [BR:
dmer04515
]
Immunoglobulin superfamily
VCAM
138817337 (Vcam1)
CD molecules [BR:
dmer04090
]
Proteins
138817337 (Vcam1)
Lectins [BR:
dmer04091
]
I-type lectins (Siglecs)
138817337 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set
ig
Ig_2
V-set
C2-set_2
Ig_4
Ig_5
Ig_6
ICAM1_3_5_D2
ICAM_N
C1-set
Motif
Other DBs
NCBI-GeneID:
138817337
NCBI-ProteinID:
XP_069863927
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MPGKMVAIFGASELLWIVFAASQAFKIETSPDYSTLVQIGDTISLTCSTTGCESPSFSWR
TQIDSPLNAKVSHERTKSTLTMDPVSFDNEHSYLCTATCGSGKMEKGIQVEIYSFPKDPE
IHLSGPLEVGKPITAQCVVPDVYPFDRLEVDLLKGDHLMKNQDFLEDMERKSLETKTLEV
TFTPVIEDIGKALVCRAKLHIDEMDSAPKERETTKELQVYISPRNTVISVQPSTRLQEGD
SVTMTCFSEGLPAPEIFWSKKLENENLQPLSGNSTLTLIAMRIEDSGIYVCEGANLIGRH
RTEVELVVQEKPFTMDISPGSRVAAQIGDTVVLTCSVTGCESPSLSWRTQIDSPLSGQVQ
SVRAKSTLTLSPVSFENEHSYLCTATCGPKKQEKGIQVELYSFPRDPEIEMSGLLMSGSP
VTVNCTVPNVYPFDHLEIELLKEGTILASKQFLEGTDRKSLETKSLDMTFTPTTEDTGKA
LVCLAKLHMGEMESEPKQRQSTQTLYVNVAPKDTTVFVSPSSILEEGSSVNMTCFSDGFP
DPKILWSRQLSNGALQPLSENTTLTLISTKMEDSGIYVCEGINQAGISRKEVELIVQVFP
KDIQLTVFPSESVKEGDTVIISCTCGNVPETWIILKKKADTGDTVLRSVDGAYTIRKAQL
EDAGVYECESKNKVGSRLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIPAIGMTIYFA
RKANMKGSYSLVDAQKSKA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggtcgcaatctttggagcctcagagttactttggattgtatttgca
gcttctcaagcttttaaaattgagacctcccctgattacagcactctggtacagattggt
gacaccatctcattgacctgtagcacgacaggttgtgagtccccatctttctcttggaga
acccagatagacagtccattaaacgcgaaggtgagccacgagaggaccaagtccacgctg
acaatggatcctgtgagtttcgacaatgaacactcttacctgtgcaccgcaacctgtgga
tctgggaagatggaaaaaggaatccaagtggagatctactctttccctaaggatccagag
attcatctcagtggccctctggaggtcggaaagccaattacggcccagtgtgtggtccct
gatgtatacccctttgacaggctggaggtggatttactgaaaggcgatcatctcatgaaa
aatcaggactttctggaagacatggaaaggaagtctctggaaaccaagactttggaagtg
acctttacccctgtcattgaggatattggaaaagctcttgtttgccgagctaaattacac
attgatgaaatggattctgcacccaaagaaagggagactaccaaagagctgcaagtctac
atctcaccccgaaacacagtcatctctgtgcagccctccacaaggctgcaagaaggcgac
tctgtgacgatgacctgcttcagcgagggtctaccagctcctgaaattttctggagcaag
aaactggagaatgagaatctgcagccactctctgggaattcaactctaaccttaattgct
atgaggatagaagattctggcatttatgtgtgtgaaggagctaatctgattggaagacac
agaacagaagtggaattagttgttcaagagaaaccatttaccatggacatctctcctggc
tcgcgggttgctgcccagattggggacaccgtggtgctgacctgttctgtcacaggctgc
gagtctccatcattgtcttggagaacgcagatagacagccctctgagcgggcaggtgcag
agtgtcagagccaagtccaccctgaccctgagccctgtgagtttcgagaacgagcactct
tacctgtgcacggcgacctgtggacctaagaagcaggaaaaggggattcaggtggaactc
tactccttccctagagatccagaaattgagatgagtggcctgctcatgagtgggagccct
gtcaccgtgaactgcacagtgcctaatgtgtacccttttgatcatttggagattgaatta
ttaaaggaaggaacgattttggcaagtaaacagtttttggagggaacagacaggaaatcc
ctggagaccaaaagtttggacatgaccttcacccccaccactgaagatactggaaaagct
cttgtttgtctggccaagttacatatgggtgagatggaatctgaacccaaacaaaggcag
agtacacagacactgtatgtcaatgttgctcctaaggacactacggtgttcgtcagcccc
tcctccatcctggaggagggcagctctgtgaatatgacatgctttagtgatggcttccca
gatccaaaaattctgtggagcagacagctgagcaatggtgctctccagcctctttctgag
aatacaactctcaccttaatctctacaaaaatggaagattctggcatatatgtgtgtgaa
gggattaaccaggctggaataagcagaaaagaagttgaattaattgtacaagtttttcct
aaggacatacaactgacagtttttccttctgagagtgtcaaggaaggagacactgtcatt
atctcctgtacttgtgggaatgttccagaaacttggataatcctgaagaaaaaagcagac
acaggagatacagtactgaggtctgtagatggcgcgtacaccatccgcaaagctcagttg
gaggatgcaggcgtgtacgagtgtgaatcgaaaaacaaagtgggatcccggttaagaagt
ctgacactggatgttaaaggaagagaaaataacaaagactatttttctcctgaactcctg
gtactgtattgtgcatcctctctcataatacctgccattggaatgaccatttattttgca
agaaaagccaatatgaaaggatcatatagtcttgtagatgcacagaaatcaaaagcgtag
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