KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138817843
Entry
138817843         CDS       T11079                                 
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138817843 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmer03400]
    138817843 (Aptx)
Enzymes [BR:dmer01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     138817843 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     138817843 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     138817843 (Aptx)
DNA repair and recombination proteins [BR:dmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     138817843 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     138817843 (Aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N Glycoamylase zf-C2H2_6
Other DBs
NCBI-GeneID: 138817843
NCBI-ProteinID: XP_069864682
LinkDB
Position
Unknown
AA seq 355 aa
MFLCQLLPRDLPVMMRVCWLVRQDSQQHRIKLPHLETVVIGRSPETKITDKKCSRQQVQL
KAECNKGYVKVKQVGVNPTSIDSVIIGKDQEMKLQPGQVLYMVNELYPYIVEFEEEAKSS
GLGTHRKRKRSGNSNSVGDVAQEAEPMTEQEPGTADPSQYPLPPKKGKDASAKKEPLGHW
SQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWASISSLKAVTSEHLELLKHM
HTVGEKVISDFAGCSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYF
LESKAIIKMVQEAGRVTVEDGTSELLKLPLRCHECQQLLPSIPQLKEHLRKHWIK
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgttcttgtgtcagctccttcccagagacttgccagtgatgatgcgggtgtgctggttg
gtgagacaggacagccagcagcatcgaatcaaacttccacatttagaaacagttgtgatt
gggcgcagcccagagaccaagatcactgataagaaatgttctcgacagcaagtacagttg
aaagcagagtgtaacaagggatatgtcaaggtcaagcaggtaggggtcaatcccaccagc
attgactcagtcataattgggaaggaccaagagatgaagctgcaacctggccaggttctc
tatatggtgaatgaactttatccatatattgtagagtttgaggaagaggcaaagagctct
ggcctaggaacacacaggaagagaaagaggtcaggcaacagcaattccgtaggagatgtt
gcccaggaagctgagcctatgacagagcaggaacctgggactgctgaccccagccaatat
cctctgcccccaaagaaggggaaagatgcatctgccaaaaaggaaccactgggccactgg
agtcaaggcttgaagatttctatgcaagaccctaaaatgcaggtttacaaagatgagcag
gtggtggtgattaaggataaatatcctaaggccaggtatcattggctggtcttgccatgg
gcctccatttccagtttgaaggctgtgaccagtgaacaccttgaacttctcaaacatatg
catactgtgggagaaaaggtgatttcagattttgctggatgcagcaaacttcgtttccga
ctgggctatcatgccattcccagcatgagccatgtacatcttcatgtgatcagccaggat
tttgattctccttgccttaaaaacaaaaaacattggaattctttcaatacagaatacttc
ctagaatcaaaagctataatcaaaatggtgcaagaggctggcagagtgactgtcgaagat
gggacgtctgagctcttgaagctgccccttcgttgtcatgagtgtcagcaactgctgcct
tccattccgcagctgaaagagcatctcaggaagcactggataaagtga

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