Dipodomys merriami (Merriam's kangaroo rat): 138818596
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Entry
138818596 CDS
T11079
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138818596
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
138818596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
138818596
NCBI-ProteinID:
XP_069865655
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MGPQSRDAWAQRLGAFRASPAAFLAGAEGEHLGRDLLSDLRSEKLSEPTKVSLLALSLEY
PAQLWPDAPAAEAAATSLLDTLVLLPPRPSALRRPLLLATTTVLVAGGALGPSSGASGRL
LPLLLGLASGRDVGRSFGPASEQRPLQATACECLRELESCQPGLLGGSLGPLRSLLGQGG
PVQPLSLLLALALRHTLLVRGRSGAGLHSLLLAGVSSGGSAWDWTLAKGDARLQPQAPCW
PTAEGAQGSAEGEPSSEDTQELRATVAQLLDASYLLTPVAQAQLLWLLGWALRGLRTQPP
VLFKPQLVRLLGTAQLTLLHSILALKAAFGEALFTAQDEALLLHRLTLAAQHPSLPQPTH
LFYLHCILTFPENWPLGPEGEEAAPLLLGPQLCGSLMPSLLHEPMALLARLHLLCLCCAE
DEDEEKGRVQSPQRYLEELLAGLRQRAALEGGPRALAILCFQASYLVASCLAKQPAVVTP
LIHGLAQLYQARPVLAPHFVDLLDQLGPELREPLRQVLRQEVVSRPVRDEALRWHLHVLA
KVAGGDAQNATLSFLKAAAAHCTDWGLQQALLGVCRVLLQTSAGAGLADLLQVLARQLED
PDGRDHARLYYILLAHLAGPKLGMALGPSLAVPALASSLVAENQGFTATLMVQETPAPIQ
LSLGPQRAKGPFPVLQLQVETLEPVYSLELRFHVEGQLYGPLEAIHVPCLCPGRPAHPLS
LSLQPRCPAPAQLDVQALFTTPAGLTCHACLPPLAVSFADLFLPFPQAPKGAESNFFEEL
WDSCLPKGAESRVWCPLGPQSLETLVARHLGPFVVVAQPPTSYHIAVRLPPDSMLLLRLE
MARGDGVPVALRTDDWAVLPLAGDYLRGLSAC
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggggccccagagccgggatgcctgggcccagcgcctgggggccttccgagccagccct
gccgccttcctggccggggccgagggcgagcacctgggtcgtgacctgctgagtgacctg
aggagcgagaagctgagcgagccgactaaggtttccctgctggccctgagcttggagtac
ccggcccagctgtggcctgacgcccctgcggcagaggcggccgccacctccctgttggac
accctcgttctcctgcccccgcgaccctcagccctccgacggcccctgttgctggccact
accaccgtcctggtggcaggcggcgccctgggccccagctcgggagcttccggccggctc
ctgcccctactgctcggcctggcctccggccgggatgtcgggcgaagctttggccccgcc
tcggaacagcgccccctgcaggccacggcgtgcgagtgccttcgcgagctggagagctgc
cagcctgggctgctggggggcagccttgggccactgcggagcctgctggggcaagggggt
cccgtgcagcccctcagcctgctgctggcgctggcgctgcgccacacgctgctggtccgc
ggcaggtctggggctggactgcacagtctgctgctggcaggggtctcctccgggggcagc
gcctgggactggacactggccaaaggagatgcccgccttcagccccaggcaccctgctgg
ccgacagctgaaggggcgcagggctctgcagagggagaacccagctccgaagacacccag
gagctgagagccactgtggcccagctgctggacgcttcctacctgctcactcctgtggcc
caggcccagcttctgtggcttctgggctgggccctgcgaggtctgcggactcagccacca
gtgctcttcaagccacaactggttcgcctgctgggaacagcgcagctgaccctgctgcac
tctattctggctctcaaggcagcttttggtgaggcgctgttcactgcccaggatgaggcc
ctgctgctccaccggctcaccctggcagcccagcacccatccctaccccaacccacacat
ctcttctacctgcactgtatcctgaccttccctgagaactggccgctgggcccggagggg
gaggaggctgccccgctgctgctgggaccccagctgtgcggcagcctcatgcccagcctc
ctgcatgagccgatggccctcctggcccgcctgcatttgctgtgcctatgctgtgctgaa
gacgaggacgaggagaaaggccgagtccagagcccacagcggtacctggaggagctgctg
gctggcttgcggcagagggcagctctggagggtggaccccgcgcactggccattctctgt
ttccaggcctcctacctggttgccagctgcctggccaagcaacccgcagtggtaacaccc
ttgatccatggactggctcaactttaccaagctcggcctgtgcttgcgccccactttgtg
gacttgttggatcagttggggcctgaactcagggagcccctcagacaggtgctgaggcag
gaagtggtgtccaggccagtcagggatgaagctcttcgctggcatctgcacgtgctggcg
aaggtggcaggaggggatgctcagaacgccaccctcagcttcctgaaggctgcagccgct
cactgcactgactggggcctgcagcaggctctgctgggggtctgccgggtcttgctgcag
acaagcgcaggtgctggcctggcggatttgctgcaggtgttggccagacagctagaggac
cctgatgggagggatcacgcccgtctgtactacatccttttagcccacctggcagggccc
aagttgggaatggcactgggcccctcccttgctgtgcctgcactggcctcatccctggtg
gctgagaaccagggctttacagcaacactgatggtacaggagaccccggccccaattcag
ctgagcctggggcctcagagggcaaaaggcccattcccagtgctccagctccaggtggag
acgctggagcctgtctattccctggagctgcgcttccatgtggaaggacagctctatggt
cccttggaggccatccacgtgccctgcctgtgtcctggccgccccgcccaccctctgtcc
ctgtccctgcagcctcgatgcccagcccctgcacagctggatgtccaggccctgttcact
acacctgctggcctcacctgccacgcctgcctgccacccctggcagtgagcttcgctgac
ctctttctgcctttcccccaggcccccaagggggctgaatcgaacttctttgaggagctc
tgggactcttgcctaccaaagggtgcagaaagccgtgtgtggtgcccacttgggccacag
agcctggagactttggtggcccgccacctagggccctttgtagtggtggcacagcctccc
accagctaccacatagctgtccggctgcctccggactccatgctgctgctgcggctggag
atggcccggggggatggagtgcccgtggctctgcggacagatgactgggctgtgctgcca
ctggctggtgactacctccgtgggctttcagcctgctga
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