Dipodomys merriami (Merriam's kangaroo rat): 138818699
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Entry
138818699 CDS
T11079
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
dmer04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138818699
04120 Ubiquitin mediated proteolysis
138818699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138818699
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138818699
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138818699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
138818699
NCBI-ProteinID:
XP_069865838
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFVKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAALSRPSGAT
TSTAAGSAPAPGSAPAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEEL
RALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATVSPTEETASTA
VTATSSASNPSSEAPPPPPEASPPASEMEKPPAPETVGAEELPEDGEPDAAELRRRRLQK
LEAPVAH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcactgaccggagccgtggtggca
catgcctactacctcaaacaccagttctaccccactgtggtatacttgaccaagtccagc
cccagcatggcagtcctgtatatacaggcctttgtccttgtcttcctgttgggcaaggtg
atgggcaaagtgttctttgggcagctgagggcagcagagatggagcaccttttggagcgt
tcctggtatgccgtcacggagacttgtctggccttcactgtctttcgggatgacttcagt
ccccgctttgtcgcactgttcactctcctcctctttctcaaatgtttccactggctggca
gaggaccgggtggactttatggaacgaagccccaatatctcctggctctttcactgccgc
atcgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
catagcatcctgacccggggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgaccatggtgctgaccatcttcgtcaagtacgtgttgcactctgtggacctccag
agtgagaacccttgggataataaggctgtgtacatgctctacacagagctcttcacaggc
ttcatcaaggttctgttgtacatggccttcatgaccatcatgatcaaggtacacaccttc
ccactctttgccatccggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagcaatccgcaacatgaacacactgtatccggatgccacc
cctgaggaactccaggcagtggacaacgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagaggcagcagacctgccctacctgccgtatggatgtcctacgggcatcactgccagcc
cagtcaccaccgccccctgagcctgcggaccaggggccacccccagccccccacccccca
ccactcctgccccagccccctaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggccacccatgggcccctttccgccagtcccgcctcccccgagctca
ggcgaggctgtggccccgccctccaccagtgcagccctttctcggcccagtggagcaacc
acaagcacagctgctggttcggcccctgcacctggctccgcccccgcccccgaagctggc
cccgcccctggcttcccattccctcctccctggatgggtatgcccctgcctccacccttc
gccttcccgcccatgcctgtaccccccgcgggctttgcggggctgacccccgaggagctg
cgggctctggagggccacgagcgccagcacctggaggcccggctgcagagcctgcgcaac
atccacacgctgctggacgcggccatgctgcagatcaatcagtacctcaccgtgctggcc
tccctggggccccccaggcctgccactgtcagccccaccgaagagacagcctcaacagcg
gttactgctacgtcctctgccagcaaccccagctctgaggctccccctccacccccagaa
gcctccccaccagcctctgaaatggaaaagcctccggctcctgagacagtgggtgccgag
gagctgcctgaggatggagagcctgatgctgccgagctccgccggcgccgcctgcagaag
ctggaggcccccgttgcccactga
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