Dipodomys merriami (Merriam's kangaroo rat): 138819179
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Entry
138819179 CDS
T11079
Symbol
Stxbp5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138819179 (Stxbp5)
Membrane trafficking [BR:
dmer04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138819179 (Stxbp5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
138819179 (Stxbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
MIOS_WD40
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
138819179
NCBI-ProteinID:
XP_069866591
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MRKFNIRKVLDGLTAGSASASQQPTPPAQQQHPSGNREPEIQETLQSEHFQLCKTVRHGF
PYQPSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSA
LADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNVESFTL
SGYVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTY
DEAIHSVAWHHEGKQFICSHSDGTLTIWNVRSPTKPVQTITPHGKQLKDGKKPEPCKPIL
KVEFKTTRSGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYP
NDFQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPAL
YSVGARQKRQGYSKKEWPINGGNWGLGAQSYPEIIITGHADGSVKFWDASAITLQVLYKL
KTSKVFEKSRNKEDKPSTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVI
TEVIPMLEVRLLYEINDVETPESEQPPPLSTPVGGSNPQPIPPQSHPSTSSSSSDGLRDN
VPCLKVKNSPLKQSPGYQTELVIQLVWVGGEPPQQITSLAVNSSYGLVVFGNCNGIAMVD
YLQKTVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCKSPTSG
SSSPHNSDDEQKMNNFIEKVKTKSRKFSKMVASDIAKMSRKLSLPTDLKPDLDVKDNSFS
RSRSSSVTSIDKESREAISALHFCETYTRKADSSPCPCLWVGTTLGTVLVIALNLPPGGE
QRLLQPVIVSPSGTILRLKGAVLRMAFLDATGCLIPPAYEPWKEHNVPEEKDEKEKLKKR
RPVSVSPSSSQEMSENQYAVICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVSLSNS
ICLACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRL
TYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRS
LAQHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLSDLEERTAAMLSSADSFSKHA
HEMMLKYKDKKWYQF
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattcaacattcggaaggtgctggacggcctgaccgccggctcggcctcggcc
tcgcagcagcccacgccgccggcgcagcagcagcacccgtccgggaaccgggagcccgag
atccaggagacgctccagtccgagcacttccagctctgcaagactgttcgccatggattc
ccttaccagccctcagccctggcctttgatcctgtgcagaagatcctggcagtaggaact
cagactggtgctttaaggctctttggtcgtccaggagtagaatgttactgccagcatgac
agcggagctgcagtaatccagctccagttcctgattaatgagggcgcacttgtgagtgca
ttggctgatgacaccttacacttatggaatttacgtcagaaaaggcctgccatattacat
tcacttaaattttgccgagaaagggttaccttttgccatctgcctttccagagtaagtgg
ctctatgtgggcactgaacgaggtaatattcacatcgtcaatgtggagtccttcacactc
tcgggttacgtcattatgtggaataaagccattgaactgtcatctaaatcccacccagga
cctgttgttcatataagtgataatccaatggatgaagggaagcttttgattggctttgaa
tctggaacagtagtcttatgggacctcaagtcaaagaaagcagactacagatatacatat
gatgaggctattcactctgtggcttggcaccatgaaggaaagcagtttatttgcagtcat
tcagatggcactttgaccatatggaatgtgaggtcacctaccaagcctgtgcagacaatc
actccacatggaaagcagttaaaggatgggaagaagccagagccatgcaaacctatcctc
aaggtggaattcaagacaactagatctggggaaccttttattattttatcaggaggttta
tcatatgatactgtaggaagaagaccttgcttaacagtgatgcatgggaaaagtacagct
gtgctggaaatggactattcaattgttgatttcctaacactctgtgaaactccatacccc
aatgatttccaagaaccatatgctgttgttgttcttctagaaaaggatttagtactaata
gaccttgcacagaatggatatcctatatttgaaaatccttaccctttgagtatacacgaa
tcccctgttacatgttgcgaatattttgctgactgtcctgtggaccttattcctgcactt
tattctgttggcgctagacagaaacgtcaaggttacagcaaaaaggaatggcccattaat
ggaggtaactggggcttgggtgctcaaagttacccagaaataattattacagggcatgct
gacgggtcagttaaattctgggatgcttctgcaataactttacaagtactatataaatta
aaaacatctaaagtatttgaaaagtcaagaaataaagaagacaaaccaagcacagacatt
gttgatgaagatccatatgccattcagatcatctcctggtgcccagagagtagaatgctg
tgcatagctggagtttcagctcatgtcattatttatagattcagcaaacaggaagtgatt
actgaagtcattccgatgcttgaggttcgattgttgtatgaaataaatgatgtggaaact
ccagagagtgagcagccaccacccttgtcgacgcctgtaggaggttccaatccacaaccc
attccccctcagtctcatccatccaccagtagcagttcatctgatgggcttcgtgacaat
gttccttgcttaaaagttaaaaattcaccacttaaacagtctccaggctatcagacagaa
ctagttattcagttggtatgggtgggtggagaaccaccacaacaaatcaccagtctggca
gtcaattcttcctatggacttgtggtttttggcaactgcaatggtattgctatggttgac
tacctgcagaaaacagtcttactcaacctggggactatcgagttatatggctcaaatgat
ccttaccgcagagaacctcggtctcctcgtaaatctcgacaaccttctggagcaggtctt
tgcgatattagtgaagggactgttgtcccagaggatcgctgcaaatctccaacttctggt
tcttcatcaccacacaattcagatgatgaacaaaaaatgaataattttatagaaaaggtg
aagaccaaaagcagaaagttttccaagatggtagccagtgatatagcaaagatgtcaagg
aagttaagtctgccaactgatctaaagcctgatttagatgtaaaggataattccttcagc
agatcacggagttcgagtgtaaccagcattgataaagaatcccgagaagccatctctgct
cttcatttctgtgaaacttacactcgaaaggcagactcatctccatgcccatgtctgtgg
gttggaacaacactaggaacagtgctagtcattgccctgaaccttcccccagggggagaa
caaagactcctacagccagtgattgtgtctccaagtggtactatattgagactaaaaggt
gcagttttgaggatggcctttctggatgccacaggctgcttaataccacctgcctatgaa
ccctggaaagaacacaatgttcctgaagaaaaagatgagaaggagaaattaaaaaagcgg
cggcctgtctcagtatccccctcatcttctcaggaaatgagtgaaaaccagtatgcagtg
atatgttctgaaaagcaggcaaaagtgatctcactgccaacacaaaactgtgcttataag
cagaacattactgagacctcgttcgtactccgaggagatattgtatctttgagcaacagc
atctgccttgcgtgtttctgtgcaaatggtcatattatgactttcagtctgccaagttta
aggcctctgttggatgtgtattacttaccccttaccaatatgcggatagccagaacattc
tgcttcaccaacaatggacaagcattatatcttgtttcacccacggaaattcagagactt
acgtatagtcaggagacatgtgaaaatcttcaggagatgttgggtgaactcttcactcct
gtggaaacacctgaggcaccgaacaggggattctttaaaggcttgtttggaggtggtgct
cagtctcttgatagagaagaactatttggagagtcatcctctgggaaggcttcaaggagt
ctagcacagcacatccctggtcctggtggcatagaaggtgtgaaaggagcagcatctgga
gttgttggagaattagcaagagccaggttggcactggatgaaagagggcagaaacttagt
gacttggaagaaagaactgcagctatgttatcaagtgcagattcgttttctaaacatgct
catgagatgatgttgaaatacaaagataagaagtggtaccagttctaa
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integrated database retrieval system
