Dipodomys merriami (Merriam's kangaroo rat): 138819691
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Entry
138819691 CDS
T11079
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmer03016
]
138819691 (Elp1)
Transfer RNA biogenesis [BR:
dmer03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
138819691 (Elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
138819691
NCBI-ProteinID:
XP_069867301
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MRNLKLFQTLEFRDIQAPGKPQCFSLRTEQGTVIIGSEHGLTEVDPVTREVKNEIPLVAE
GFLPEDGSGCIVGIQDLLDQESVCVATASGDVLLCNLKTHQLECVGSVASGISVMSWSPD
QELVLLATGQQTLIMMTRDFDPIMEQQIHQDDFGESKFITVGWGKKETQFHGSEGRQAAF
QMQMHESALPWDDHRPHITWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL
GPVLAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGQFTLPFLKDEVKVNELLWNADSSV
LAVWLEDLQREDSSTLKSYVQLWTVGNYHWYLKQSLPFSTSGKSKIVSLMWDLVTPYRLH
VLCQGWHYLCYDWHWTTDRSSGDNSSDLANVAVIDGNRVLVTVFRQTVIPPPMSTYRLLL
PHPVNQVTFSANPEKSNNIAVLDASNQISVYKCGDSPSVDPTVKLGAVGGNGFKVPLRTP
HLEKRYIIQLENNEDQEVNPLKLSLLTWIEEDTFLGVSHSQSSQQSVLHHLTIAPSEEDK
EQGQLNVSSSVIVDGVIISLCCSSKTKSLALQLADGQVFKYLWESPSLAVEPWKNSGGLP
VRFPYPCTQTELAMIGGEECVLGLTDKCRFFINDIEVASNITSFAVYDEFLLLTTHSHTC
QCFPLRDASFKTLQGGLCSSHVANGEILRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPVTSNLHLSRDPDGKKLDLICDAMRAAMENINPHKYCLSIL
TSHVKKTTPELELVLQKVHKLQENAPGVPDAVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYERAIGHLSKCGPEYFSE
CLNLIKDKNLYKEALKLYPPNSQQYKAISIAYGEHLIQENLHEPAGLVFARCGAHEEALS
AFLTCGSWQQALCMAVQLHFSKDQLAGLGRTLAGKLVEQRKLREAAVVLEQYAQDYEEAV
LLLLEGVAWEEALRLVYKYNRLDIIETNIKPSILEAQKNYMLFLDSQTSAFTRHKKRLLV
VRELKEQAQQGNVDDDVHHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKA
ERKKHSLKEGSPLEDLALLEALNEVVQSIEKLKDEVHSILKVLFLFEFDEQGKELQTAFE
GTLQLMERSLPEIWTLAYQQMSAMPVLGPNSTANSIMASYQQQKTSVPVLDAEIFIPPKI
DRRNQWKLSLLE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatctaaagttatttcagaccctggagttcagggacattcaggcacctgggaaa
cctcagtgcttctctcttcgaactgagcaggggactgtgatcattggctcagaacatgga
ctaacagaagtagatcctgtcacaagagaagtgaaaaatgaaattcctttggtggcagaa
ggctttcttccagaggacggaagtggctgcattgttggtattcaggacttgctggatcag
gagtctgtatgtgtggctacagcctctggagacgtcctactctgtaatctcaaaacacac
caactggaatgtgttgggagtgtggccagtggtatttctgttatgagctggagtcctgac
caagagctggtgcttcttgccacaggtcaacagaccctgattatgatgacaagagacttt
gacccaatcatggagcagcaaatccaccaagatgattttggcgaaagcaaatttattact
gttggatggggcaaaaaggagacccagttccatggttcagaaggcaggcaagcagctttt
cagatgcaaatgcatgagtctgctttaccctgggatgatcacagaccacacattacctgg
cgtggagatggacagttttttgctgtgagtgttgtttgcccagaaacaggagctcggaag
gtcagagtgtggaaccgagagtttgctttgcagtcaaccagcgaacctgtggcgggactg
ggacctgtgctggcttggaaaccctcagggagtttgattgcatctacacaagataaaccc
aaccagcaggacgtggtgttttttgaaaaaaatggccttcttcatggacaatttacactt
cctttcctcaaagatgaggttaaggttaatgaattgttgtggaatgcagattcctctgtg
cttgctgtttggctagaagaccttcagagggaagacagttccactctgaaatcctatgtt
cagctctggactgttggaaactatcactggtatctcaaacaaagcctacccttcagcacc
agtgggaaaagcaagattgtgtccttgatgtgggacctggtaactccataccggctacat
gttctatgtcagggctggcattacctctgctatgactggcactggacaactgatcggagc
tcaggagataattcgagtgacttggcaaatgtggctgtcattgatggaaacagagtattg
gtgacagtcttccggcaaactgtgattccacctcccatgagcacctacagactgctgctc
ccacacccagttaatcaggtcacattctctgcaaaccctgagaagagtaacaacattgct
gtcctagatgccagtaaccagatttctgtttataagtgtggtgatagtccaagtgtggat
cccacagtgaagctgggagctgtgggtggaaatggatttaaagttccccttagaacacct
catctggaaaagagatacataattcagcttgagaataatgaagatcaagaagtaaaccca
ctgaaactcagccttcttacctggattgaagaagatacatttctgggtgttagccacagt
cagtctagccaacagtctgtccttcaccacttgactatagctccttccgaggaggataag
gagcaaggacaactcaatgtcagttcatctgtgattgtggatggggtcataatcagtctg
tgttgcagttccaagaccaagtctttagcattacagctggctgatggccaagtatttaaa
tatctttgggagtcaccttctttggctgttgaaccatggaagaactctggaggacttcct
gttcgatttccttatccatgtacacaaactgaattggccatgattggaggagaggaatgt
gtccttggtctgactgacaagtgtcgttttttcatcaatgacattgaggttgcatcaaat
atcacatcatttgcagtgtatgatgaatttttattgttgacaacccattcccatacctgc
cagtgttttcccctgagggatgcttcatttaaaacgttgcagggaggtttgtgcagcagt
catgtagctaatggggaaattctgcggaaggtggagaggggctcacggattgtcacagtt
gtgccccaggacacaaaacttatattacagatgccaagggggaacttggaagttgttcat
catcgagccctcgttttagctcagattcggaagtggctggacaaacttatgtttaaagaa
gcatttgaatgcatgagaaaactgagaattaatctcaatctgattcatgatcataatcca
aaggtgttccttgaaaatgtggaaaccttcataagacagatagattctgtaaatcatatc
aatttgtttttcacagaactaaaagaagaagatgtcacaaagaccatgtaccctccacca
gttaccagcaatcttcatctgtccagagatcctgatgggaaaaaacttgaccttatctgt
gatgccatgagggcagccatggaaaacatcaatccccacaagtactgcctgtcaatactc
acatcccatgtgaagaagacgaccccagagctggaacttgtgctgcagaaagtgcacaag
cttcaagaaaatgcaccaggagttcctgatgctgtaagtgcagaagaggccttgaaatat
ctgctgcttctggtagacgttaatgaattatatgatcattctcttgggacctatgacttt
gatttagttctcatggtagctgagaagtcacagaaggatcccaaagagtatcttccattt
cttaatacacttaagaaaatggaaactaattaccagcggttcactatagacaaatacttg
aaacgatatgagagagccattggccacctcagcaaatgtggaccagagtacttctcagaa
tgcctaaatttaataaaagataaaaacttgtataaagaagctctgaagttatatccacca
aactcacagcagtacaaggctatcagcattgcgtatggggagcacttgatacaggagaac
ctgcatgaaccagcagggcttgtgtttgcccgctgtggtgcccatgaggaggctctctct
gcctttctgacttgtggcagttggcagcaagcgctctgcatggcagttcagcttcacttt
tctaaagaccagttggctggtctcgggagaactctggcagggaagctagtggagcagagg
aagctcagagaagcagccgtagttctggaacagtatgcccaggattatgaagaagctgtg
ctcttgcttttagaaggagttgcctgggaagaagccttgagactggtatacaagtataat
agactggatattatagaaaccaacataaagccttccatcttagaagcccagaaaaattac
atgttgtttctggactctcagacatctgcatttactcgtcataaaaaacgcttactagta
gttcgagagctcaaagagcaggctcagcaggggaatgtggatgatgatgtgcatcatggt
caagagtcagacctcttctcagaaaccagcagtgttgtgagtggcagtgagatgagtggc
aaatactcccatagtaactccaggatatcagcgcgatcatctaagaatcgccgtaaagca
gaacgaaaaaagcacagcctcaaagaagggagtcccctggaggatctggcccttttggag
gcactgaatgaagtggtacaaagcattgaaaaattgaaagatgaagtacacagtatttta
aaggtactctttctctttgagtttgatgagcaaggaaaggaattacagacagcctttgag
ggtactctgcagttgatggaaagatcactcccagaaatttggactcttgcctaccagcag
atgtcagctatgcctgttctaggtccaaattctactgcaaacagcatcatggcctcttat
caacagcagaagacttcagttcctgttcttgatgctgagatttttataccaccaaagatt
gacagaagaaatcaatggaaactgagcctactagagtga
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