KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138819691
Entry
138819691         CDS       T11079                                 
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
  KO
K11373  elongator complex protein 1
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dmer03016]
    138819691 (Elp1)
Transfer RNA biogenesis [BR:dmer03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    138819691 (Elp1)
SSDB
Motif
Pfam: Beta-prop_ELP1_1st A-sol_ELP1 HB_ELP1 Beta-prop_ELP1_2nd TPR_ELP1 TPR_GEMI5 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 138819691
NCBI-ProteinID: XP_069867301
LinkDB
Position
Unknown
AA seq 1332 aa
MRNLKLFQTLEFRDIQAPGKPQCFSLRTEQGTVIIGSEHGLTEVDPVTREVKNEIPLVAE
GFLPEDGSGCIVGIQDLLDQESVCVATASGDVLLCNLKTHQLECVGSVASGISVMSWSPD
QELVLLATGQQTLIMMTRDFDPIMEQQIHQDDFGESKFITVGWGKKETQFHGSEGRQAAF
QMQMHESALPWDDHRPHITWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL
GPVLAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGQFTLPFLKDEVKVNELLWNADSSV
LAVWLEDLQREDSSTLKSYVQLWTVGNYHWYLKQSLPFSTSGKSKIVSLMWDLVTPYRLH
VLCQGWHYLCYDWHWTTDRSSGDNSSDLANVAVIDGNRVLVTVFRQTVIPPPMSTYRLLL
PHPVNQVTFSANPEKSNNIAVLDASNQISVYKCGDSPSVDPTVKLGAVGGNGFKVPLRTP
HLEKRYIIQLENNEDQEVNPLKLSLLTWIEEDTFLGVSHSQSSQQSVLHHLTIAPSEEDK
EQGQLNVSSSVIVDGVIISLCCSSKTKSLALQLADGQVFKYLWESPSLAVEPWKNSGGLP
VRFPYPCTQTELAMIGGEECVLGLTDKCRFFINDIEVASNITSFAVYDEFLLLTTHSHTC
QCFPLRDASFKTLQGGLCSSHVANGEILRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPVTSNLHLSRDPDGKKLDLICDAMRAAMENINPHKYCLSIL
TSHVKKTTPELELVLQKVHKLQENAPGVPDAVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYERAIGHLSKCGPEYFSE
CLNLIKDKNLYKEALKLYPPNSQQYKAISIAYGEHLIQENLHEPAGLVFARCGAHEEALS
AFLTCGSWQQALCMAVQLHFSKDQLAGLGRTLAGKLVEQRKLREAAVVLEQYAQDYEEAV
LLLLEGVAWEEALRLVYKYNRLDIIETNIKPSILEAQKNYMLFLDSQTSAFTRHKKRLLV
VRELKEQAQQGNVDDDVHHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKA
ERKKHSLKEGSPLEDLALLEALNEVVQSIEKLKDEVHSILKVLFLFEFDEQGKELQTAFE
GTLQLMERSLPEIWTLAYQQMSAMPVLGPNSTANSIMASYQQQKTSVPVLDAEIFIPPKI
DRRNQWKLSLLE
NT seq 3999 nt   +upstreamnt  +downstreamnt
atgcggaatctaaagttatttcagaccctggagttcagggacattcaggcacctgggaaa
cctcagtgcttctctcttcgaactgagcaggggactgtgatcattggctcagaacatgga
ctaacagaagtagatcctgtcacaagagaagtgaaaaatgaaattcctttggtggcagaa
ggctttcttccagaggacggaagtggctgcattgttggtattcaggacttgctggatcag
gagtctgtatgtgtggctacagcctctggagacgtcctactctgtaatctcaaaacacac
caactggaatgtgttgggagtgtggccagtggtatttctgttatgagctggagtcctgac
caagagctggtgcttcttgccacaggtcaacagaccctgattatgatgacaagagacttt
gacccaatcatggagcagcaaatccaccaagatgattttggcgaaagcaaatttattact
gttggatggggcaaaaaggagacccagttccatggttcagaaggcaggcaagcagctttt
cagatgcaaatgcatgagtctgctttaccctgggatgatcacagaccacacattacctgg
cgtggagatggacagttttttgctgtgagtgttgtttgcccagaaacaggagctcggaag
gtcagagtgtggaaccgagagtttgctttgcagtcaaccagcgaacctgtggcgggactg
ggacctgtgctggcttggaaaccctcagggagtttgattgcatctacacaagataaaccc
aaccagcaggacgtggtgttttttgaaaaaaatggccttcttcatggacaatttacactt
cctttcctcaaagatgaggttaaggttaatgaattgttgtggaatgcagattcctctgtg
cttgctgtttggctagaagaccttcagagggaagacagttccactctgaaatcctatgtt
cagctctggactgttggaaactatcactggtatctcaaacaaagcctacccttcagcacc
agtgggaaaagcaagattgtgtccttgatgtgggacctggtaactccataccggctacat
gttctatgtcagggctggcattacctctgctatgactggcactggacaactgatcggagc
tcaggagataattcgagtgacttggcaaatgtggctgtcattgatggaaacagagtattg
gtgacagtcttccggcaaactgtgattccacctcccatgagcacctacagactgctgctc
ccacacccagttaatcaggtcacattctctgcaaaccctgagaagagtaacaacattgct
gtcctagatgccagtaaccagatttctgtttataagtgtggtgatagtccaagtgtggat
cccacagtgaagctgggagctgtgggtggaaatggatttaaagttccccttagaacacct
catctggaaaagagatacataattcagcttgagaataatgaagatcaagaagtaaaccca
ctgaaactcagccttcttacctggattgaagaagatacatttctgggtgttagccacagt
cagtctagccaacagtctgtccttcaccacttgactatagctccttccgaggaggataag
gagcaaggacaactcaatgtcagttcatctgtgattgtggatggggtcataatcagtctg
tgttgcagttccaagaccaagtctttagcattacagctggctgatggccaagtatttaaa
tatctttgggagtcaccttctttggctgttgaaccatggaagaactctggaggacttcct
gttcgatttccttatccatgtacacaaactgaattggccatgattggaggagaggaatgt
gtccttggtctgactgacaagtgtcgttttttcatcaatgacattgaggttgcatcaaat
atcacatcatttgcagtgtatgatgaatttttattgttgacaacccattcccatacctgc
cagtgttttcccctgagggatgcttcatttaaaacgttgcagggaggtttgtgcagcagt
catgtagctaatggggaaattctgcggaaggtggagaggggctcacggattgtcacagtt
gtgccccaggacacaaaacttatattacagatgccaagggggaacttggaagttgttcat
catcgagccctcgttttagctcagattcggaagtggctggacaaacttatgtttaaagaa
gcatttgaatgcatgagaaaactgagaattaatctcaatctgattcatgatcataatcca
aaggtgttccttgaaaatgtggaaaccttcataagacagatagattctgtaaatcatatc
aatttgtttttcacagaactaaaagaagaagatgtcacaaagaccatgtaccctccacca
gttaccagcaatcttcatctgtccagagatcctgatgggaaaaaacttgaccttatctgt
gatgccatgagggcagccatggaaaacatcaatccccacaagtactgcctgtcaatactc
acatcccatgtgaagaagacgaccccagagctggaacttgtgctgcagaaagtgcacaag
cttcaagaaaatgcaccaggagttcctgatgctgtaagtgcagaagaggccttgaaatat
ctgctgcttctggtagacgttaatgaattatatgatcattctcttgggacctatgacttt
gatttagttctcatggtagctgagaagtcacagaaggatcccaaagagtatcttccattt
cttaatacacttaagaaaatggaaactaattaccagcggttcactatagacaaatacttg
aaacgatatgagagagccattggccacctcagcaaatgtggaccagagtacttctcagaa
tgcctaaatttaataaaagataaaaacttgtataaagaagctctgaagttatatccacca
aactcacagcagtacaaggctatcagcattgcgtatggggagcacttgatacaggagaac
ctgcatgaaccagcagggcttgtgtttgcccgctgtggtgcccatgaggaggctctctct
gcctttctgacttgtggcagttggcagcaagcgctctgcatggcagttcagcttcacttt
tctaaagaccagttggctggtctcgggagaactctggcagggaagctagtggagcagagg
aagctcagagaagcagccgtagttctggaacagtatgcccaggattatgaagaagctgtg
ctcttgcttttagaaggagttgcctgggaagaagccttgagactggtatacaagtataat
agactggatattatagaaaccaacataaagccttccatcttagaagcccagaaaaattac
atgttgtttctggactctcagacatctgcatttactcgtcataaaaaacgcttactagta
gttcgagagctcaaagagcaggctcagcaggggaatgtggatgatgatgtgcatcatggt
caagagtcagacctcttctcagaaaccagcagtgttgtgagtggcagtgagatgagtggc
aaatactcccatagtaactccaggatatcagcgcgatcatctaagaatcgccgtaaagca
gaacgaaaaaagcacagcctcaaagaagggagtcccctggaggatctggcccttttggag
gcactgaatgaagtggtacaaagcattgaaaaattgaaagatgaagtacacagtatttta
aaggtactctttctctttgagtttgatgagcaaggaaaggaattacagacagcctttgag
ggtactctgcagttgatggaaagatcactcccagaaatttggactcttgcctaccagcag
atgtcagctatgcctgttctaggtccaaattctactgcaaacagcatcatggcctcttat
caacagcagaagacttcagttcctgttcttgatgctgagatttttataccaccaaagatt
gacagaagaaatcaatggaaactgagcctactagagtga

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