Dipodomys merriami (Merriam's kangaroo rat): 138820230
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Entry
138820230 CDS
T11079
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138820230 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138820230 (Vps35)
Membrane trafficking [BR:
dmer04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
138820230 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
138820230
NCBI-ProteinID:
XP_069867998
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSVYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESRESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcctggatgaagccata
caggctgtgaaggtacagtcctttcagatgaagagatgcctggacaaaaacaaacttatg
gatgctctgaaacatgcttctaacatgcttggtgaactccggacgtctatgttatcacca
aaaagctactatgaactttatatggctatttctgatgagctacactacttggaggtctac
ctgacagatgaatttgctaaaggacgaaaagtagcagatctctatgagcttgtacaatat
gctggaaacataatcccaaggctctatctgttgattacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgta
cagcatccattgaggggtttatttcttcggaattatcttcttcagtgtaccagaaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatattagtgactccatg
gattttgtattgctcaactttgcagaaatgaacaagctctgggtgcgaatgcaacatcaa
ggacatagccgagatagagaaaaaagggaacgagaaagacaagaactgagaattttagtg
ggaacaaatttggtgcgcctcagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgacaggtatactggagcaagttgtgaattgtagggatgctttggctcaagaa
tatctcatggaatgtattattcaggtttttcctgatgaatttcatctccagacattgaat
ccttttcttcgggcctgtgcagagttacaccaaaatgtaaatgtaaaaaatataatcatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacctggaatcccagct
gatattaaactttttgacatattttcacaacaggtggctacagtgatacagtctagacag
gatatgccatcagaggatgttgtgtctttacaagtctctctaattaatcttgcaatgaaa
tgttacccagatcgtgtggactatgttgataaagttctagaaacaacagtggagatattc
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgatacttataacaatatcttaacagtcttaaaattaaaacat
tttcacccactctttgagtattttgactatgagtccagaaagagcatgagttgttatgtg
ctgagtaatgttctagattataacacagaaattgtctctcaagaccaggtggactctata
atgaatttggtatccacattgatacaagatcagccagatcaacctatagaagatcctgat
ccagaagactttgctgatgagcagagccttgtgggccgattcattcatcttctgcggtct
gatgaccctgatcagcagtatttgattttaaacacagcacgaaagcattttggagctggt
ggaaatcagcggattcgcttcacactaccacctttggtatttgcagcttaccagctggct
tttcgatacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatc
ttttcatttgctcaccagactatcagtgctttaattaaagcagagctggcagaattacct
ctgagactttttcttcaaggagcactagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctgtgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgccataactttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagagaaccatgaaccattgaggactcagtgtgcactcgctgcatccaaactt
ctgaaaaaacctgatcagggccgagctgtgagcacttgtgcacatcttttctggtctggc
agaaacacagataaaaatggagaggagcttcatggaggcaagagggtaatggaatgccta
aagaaagctctaaaaatagcaaatcagtgcatggacccctctctacaagtgcagcttttt
atagaaattctgaatagatacatctatttttatgaaaaggaaaatgatgcggtaactatt
caggttttgaaccagcttatccaaaagattagagaagatcttccaaatctagagtccagt
gaagaaaccgagcagattaacaaacattttcataacacactggaacatttgcgcttgagg
cgggaatcacgagaatctgaggggccaatctatgaaggtctcatcctttaa
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