Dipodomys merriami (Merriam's kangaroo rat): 138820234
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Entry
138820234 CDS
T11079
Symbol
Cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04064
NF-kappa B signaling pathway
dmer04217
Necroptosis
dmer04380
Osteoclast differentiation
dmer04622
RIG-I-like receptor signaling pathway
dmer04625
C-type lectin receptor signaling pathway
dmer04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
138820234 (Cyld)
04668 TNF signaling pathway
138820234 (Cyld)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
138820234 (Cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138820234 (Cyld)
04625 C-type lectin receptor signaling pathway
138820234 (Cyld)
09158 Development and regeneration
04380 Osteoclast differentiation
138820234 (Cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmer01002
]
138820234 (Cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138820234 (Cyld)
Enzymes [BR:
dmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138820234 (Cyld)
Peptidases and inhibitors [BR:
dmer01002
]
Cysteine peptidases
Family C67
138820234 (Cyld)
Ubiquitin system [BR:
dmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
138820234 (Cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
138820234
NCBI-ProteinID:
XP_069868002
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI
PSVKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERLSLFKNRSRLS
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV
YQGKQLFQCEEDCGVFVALDKLEIIEDDDNGLESDYAGPVDTMQSEVPPLEINSRVSLKV
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFNGVQLCSFASVESTVLLHIN
DIIPDSVAQERRPLKLAFMSRGVGDKGSSSHNKPKVTGSTSDPGNRNRSELFYTLNGSSV
DSQPQSKSKNTWYIDEVAEDPAKSLTELSPDFGRSSPPLQPPSMNSSLSSENRFHSLPFS
LTKMPNTNGSIGHNPLSLSVQSVMGELSSMPVQESPPVPSSSGNSHGLEVGSLAEVRENP
PFYGVIRWIGQPPGLNDVLAGLELEDESAGCTDGTFRGTRYFTCALKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCY
LDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPK
DLPDWDWRHSCIPCQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFN
IPQVTPCPEVGEYLKMSPEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggcttatggagccaagaaaaagtcacttcaccctactgggaagagcggata
ttttatttgcttcttcaagaatgcagtgtgacagacaaacagacacaaaagctgcttaaa
gtaccgaaggggagtataggacagtacatccaagatcgctctgtggggcattcaaggatt
ccttcagtgaaaggcaagaaaaatcagattggattaaagatcctagagcaacctcatgca
gttctttttgttgatgaaaaggatgttgtagaaataaatgaaaaattcacagagttacta
ctggcaattactaactgtgaggagaggctcagcctgtttaaaaacagaagccgactaagt
aaaggcctccagatagatgtcggctgtcctgtgaaggtgcagctgagatccggggaagag
aaatttccaggagtcgtgcgcttcagaggacccttgttagctgagagaacagtgtcgggc
atattctttggagtagaattactggaagaaggccgtggtcaaggtttcactgatggggta
tatcaaggaaaacagctgtttcagtgtgaggaagattgtggagtgttcgttgcattggac
aaactagaaattatagaagatgatgacaacgggctggaaagtgattatgcaggcccagtg
gacacaatgcagtctgaagtcccccctttggaaataaactccagagtttctttgaaggtt
ggagaaactatagaatctggaacagtaatattctgtgatgttttaccaggaaaagagagc
ttaggatattttgttggtgtagacatggataaccctattggcaactgggatggaagattt
aatggagtacagctttgtagttttgcaagtgttgaaagtacagttctcttacacatcaat
gatatcatcccagatagcgtggcacaggaaaggaggcctctcaaacttgcctttatgtca
agaggtgttggggacaaaggttcatccagtcataataaaccaaaggttacaggatctacc
tcagaccctggaaatagaaacagatctgaattattttataccttaaatgggtcttctgtt
gactcacaaccacaatccaaatcaaaaaatacatggtacattgatgaagttgcagaggat
cctgcaaagtcacttacagagctatctccagatttcggacgttcttcaccaccactgcag
ccaccttccatgaactcctccttatctagtgagaacagatttcactctttacccttcagt
ctgacgaagatgcccaacaccaatggcagtattggtcacaacccgctttctctgtcagtt
cagtctgtgatgggagagctgagcagcatgcctgtccaggagagcccacctgtgcccagc
tcttctggtaactcacatggcctcgaggtgggctcgctggctgaagtgagagagaaccct
cctttttatggtgtgatccgttggattggtcagccaccaggactcaatgacgtgctagct
ggactggaactggaggatgaaagtgcaggctgtacagatggaaccttcaggggcactcga
tatttcacctgtgccctgaaaaaggcgctgttcgtgaaactgaagagctgcaggcctgac
tctaggtttgcgtccctgcagcctgtttccaatcagattgaacgctgtaactctttagct
tttgggggatacttaagtgaagtagtagaagaaaatactccaccaaaaatggaaaaagaa
gggttggagataatgattggaaagaagaagggaatccagggtcattacaattcttgttac
ttagactcaaccttattctgcttatttgcttttagttctgttctggacactgtattactt
agacccaaagaaaagaatgatgtagaatattatagtgaaactcaagagctactgaggaca
gaaattgttaatcctctgagaatatatggatatgtgtgtgctacaaaaattatgaaactg
aggaaaatacttgaaaaagttgaggctgcatcaggatttacctctgaagaaaaagatcct
gaagaattcctaaacatcctgtttcatcatattttaagggttgaaccattgttaaaaata
agatcagcaggtcaaaaggtgcaagattgttacttctatcaaatttttatggagaaaaat
gagaaagttggagttcctacaattcagcagttactagaatggtcttttatcaacagtaac
ctgaaattcgcagaggcaccatcatgtctgattattcagatgcctcggtttggaaaagac
ttcaaactattcaaaaaaatttttccttccttggaattaaatataacagatttacttgaa
gacactcccaggcagtgcaggatctgtggagggcttgcaatgtacgagtgtagagaatgc
tacgatgaccccgacatctcagctggaaagatcaagcagttctgtaagacctgcaacact
caagtccaccttcatcctaagaggctgaaccacaaatacaacccggtgtcccttcccaaa
gatttgcctgactgggactggagacacagctgcattccctgccagaagatggaattgttt
gctgttctctgcatagaaacaagccactatgttgcgtttgtgaagtatgggaaggatgac
tctgcctggctcttctttgacagcatggctgatcgggatggtggtcagaatggcttcaac
attcctcaagtgacaccttgtccggaagtgggagaatacttgaagatgtctccagaggat
ctgcactcattggactccagaagaatccaaggctgtgcccgcagactgctctgtgatgct
tatatgtgcatgtaccagagcccaacgatgagcttgtacaagtaa
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