Dipodomys merriami (Merriam's kangaroo rat): 138820566
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Entry
138820566 CDS
T11079
Symbol
Tnc
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04151
PI3K-Akt signaling pathway
dmer04510
Focal adhesion
dmer04512
ECM-receptor interaction
dmer04518
Integrin signaling
dmer05165
Human papillomavirus infection
dmer05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138820566 (Tnc)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138820566 (Tnc)
04518 Integrin signaling
138820566 (Tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138820566 (Tnc)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
138820566 (Tnc)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138820566 (Tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138820566 (Tnc)
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138820566 (Tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
DUF7949
NDNF
fn3_2
DUF4998
hEGF
EGF
CBX7_C
Motif
Other DBs
NCBI-GeneID:
138820566
NCBI-ProteinID:
XP_069868378
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MGFMTRLLSGILLALLALPSEGGVLKRIIRHKRQSGVNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLFAPSESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
DLLSRLEELEALVSSLREQCTMGAGCCLQPAEGRLDSRPLCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCSLRGQCLDGQCVCAAGFAGADCSEPACPSDCNDQGRCVQGACVCFE
GYTGPDCGREVCPGPCSEEHGTCVDGRCVCREGFAGADCREPLCLHGCRGRGRCVENECV
CDEGFTGDDCGELICPHDCFDRGRCLNGTCDCDEGFAGEDCGQLACPHDCRGRGRCHEGQ
CVCDEGFAGPDCAERRCPADCHHRGRCLAGRCECDAGFAGPDCGERQCPRGCGGRGRCAD
GQCVCDEGYTGEDCGQRRCPGDCHGRGRCVQGRCVCEPGYQGFDCGDMSCPGDCHGRGRC
VNGMCVCDDGFTGEDCRERRCPRDCSLRGRCVDGRCECEPGFAGPDCAQLACPADCHGQG
RCVDGQCVCHEGFMGRDCQERRCPGDCHGQGRCVDGRCACHEGFAGPDCAQRSCPSDCHG
LGQCVSGRCICQEGYAGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLRRVTTTRLDAPSQLEVKDITDTTALVTWFKPLAEIDSIELSYGAK
DMPGDRTTIDLTHDENQYSIGNLKPDTEYEVSLVSRRVDMSSNPAKETFTTGLDAPRNLR
RVSQTDNSITLEWRNVKAAIDNYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKEDKESNPATINAATDMDAPKDLQVSETTENSLTLLWRAPLAKFDRYRLNYS
LSTGQSGEAQLPKDTTSYVLTGLEPGQEYTIVLTAEKGRHKSKPAHVKASTEAEPEVDNL
LVSDATPDGFRLSWTADEGIFDSFVLKIRDTKKQSEPLEITLPSPERTRDVTGLREATEY
EIELYGISKGRQSQPVSAIATTAMGPPKEITFTDITENSATVSWTAPTAQVENFRITYVP
MTGGDPSIVTVDGSKTETRLVKLTPGMEYHVSVIAMKGFEESDPVSGSLTTALDGPSGLV
TANITDSEALAMWQPAIATVDSYVISYTGERVPEITRTVSGNTVEYALADLEPATEYTLR
IFAEKGPQKSLTITTKFTTDLDSPRDLTATDIQSETALLTWRPPRASVTGYLLVYESVDG
TIKEVIVGPDTTSYSLADLSPSTHYTARIQALSGSLRSKLIETIFTTIGLLYPFPRDCSQ
AMLNGDTTSGLYTIYLNGNKSQALEVYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAG
FGDRREEFWLGLDNLSKITAQGQYELRVDLQDHGDTAYAVYDRFSVGDAKTRYKLKVEGY
SGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQG
VNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgggattcatgactcggctactgtcaggcattttgctagcattgcttgccctcccttct
gaaggtggggtcctgaagagaatcatccgacacaagcgacagagtggggtgaatgtcacc
ttgccagaggagaatcagccagtcgtgtttaatcatgtctataacatcaagctacccgtg
gggtcacagtgttctgtagatctggaatcagccagtggggaaaaggacctgttcgcacct
tcagagtccagtggaagtttccaagaacacaccgtggatggagagaatcaaatcgtgttc
acacatcgcatcaacattccccgccgggcctgcggctgcgccgctgccccagacgtgaag
gatctgctgagcagactggaggagctagaggccctggtgtcctccctgagagagcagtgc
accatgggagcaggctgttgtctccagcctgcagaaggccgcctggactccaggcctctc
tgcagcggccggggcaacttcagcacggaaggctgcggctgtgtttgcgaaccgggctgg
aaaggccccaactgctcggagcccgagtgcccgggcaactgcagcctgcgcggccagtgc
ctggacgggcagtgcgtgtgcgccgcgggcttcgcgggcgccgactgcagcgagccggcc
tgtccctccgactgcaacgaccagggccgctgcgtgcagggcgcctgcgtctgcttcgag
ggctacacggggcccgactgcggccgggaggtctgcccggggccctgcagcgaggagcac
ggcacctgcgtggacgggcggtgcgtgtgccgggagggcttcgcgggcgccgactgccgc
gagcccctgtgcctccacggctgccgcggccgcgggcgctgcgtggagaacgagtgcgtg
tgcgacgagggcttcacgggcgacgactgcggcgagctcatctgcccgcacgactgcttc
gaccgcggccgctgcctcaacggcacctgcgactgcgacgagggcttcgcgggcgaggac
tgcggccagctcgcctgtccccacgactgccgcggccggggccgctgccacgagggccag
tgcgtgtgcgacgagggcttcgcgggcccggactgcgccgagcggcgctgcccggccgac
tgccaccaccgcggccgctgcctggccgggcgctgcgagtgcgacgcgggcttcgcgggg
cccgactgcggggagcggcagtgcccgcggggctgcggcgggcgcggccgctgcgccgac
ggccagtgcgtgtgcgacgagggctacaccggcgaggactgcggccagcggcgctgcccc
ggcgactgccacggccgcggccgctgcgtccagggccgctgcgtgtgcgagccgggctac
cagggcttcgactgcggcgacatgagctgccccggcgactgccacgggcgcggccgctgc
gtgaacggcatgtgcgtctgcgacgacggcttcaccggcgaggactgccgggagcgccgg
tgcccgcgcgactgcagcctccgcggccgctgcgtggacggccgctgcgagtgcgagccg
ggcttcgcgggccccgactgcgcgcagctcgcctgccccgccgactgccacggccagggc
cgctgcgtggacggccagtgcgtctgccacgagggcttcatgggccgagactgccaggag
cgcaggtgtcccggcgactgccacggccagggccgctgcgtggacggccggtgcgcctgc
cacgagggcttcgcgggccccgactgcgcgcagcgctcctgccccagtgactgtcacggc
ctggggcagtgtgtgtccggccgctgcatctgccaggagggctatgccggggaggactgc
tccgaggtgtcccctcccaaagaccttatagtgaccgaagtgaccgaggaaactgtaaac
ctggcctgggacaatgagatgcgggtcaccgaataccttatcatgtacacgcctacccat
gccgatggcctggaaatgcagttccgtgtgcctggggaccagacatctaccaccatccgg
gagctggagcccggtgtggagtacttcatccgtgtgtttgccatcctggagaacaagagg
agcatccctgtcagtgccagggtggccacttacttgcctgcacctgaaggcctaaaattc
aagtccatcaaggagacatcagtggaagttgagtgggatcctctagacattgcttttgaa
acatgggagatcatcttccggaatatgaataaagaagacgagggagagatcaccaaaagc
ctacgaaggccagagacttcttaccggcaaactggtcttgcccctgggcaagagtatgag
atatctttgcacattgtgaagaacaacaccaggggtcctggcttgaggagggtgacgaca
acccgcctagatgctcccagccagcttgaggtgaaagacatcacagacaccacagctcta
gtcacctggttcaagcccctggctgagatagacagcatcgagctctcctatggtgccaaa
gatatgcctggtgaccgcactaccatcgaccttacacatgacgagaaccagtattccatc
ggaaacctaaagcctgacacagaatacgaggtgtccctcgtctcccgcagggtggacatg
tccagcaacccagccaaagagaccttcacaacaggcctggatgctccccggaatctccga
cgtgtctcccagacagacaacagtatcaccttggaatggaggaatgtcaaggcagccatt
gacaactacagaattaagtatgcacccatctctggaggtgaccatgcagaagttgatgtc
ccaaagagtcaacaagccacaaccaaaaccacactcacgggtctgaggccaggaactgaa
tatgggattggcgtttctgctgtgaaggaggacaaggagagcaatccagcaaccatcaat
gcagctacagacatggatgcacccaaggacctccaggtttctgaaacaacagagaacagc
ctgaccctgctctggagggcaccactggccaagttcgaccgttaccgcctcaactacagc
ctatctacaggccagtcaggagaggcccagctgccgaaggacaccacatcctatgtctta
acggggttggaaccaggacaggaatacaccattgtcctcacagccgagaagggcaggcac
aagagcaagccggcacatgtgaaggcgtccactgaagcagaaccggaagttgacaacctt
ctagtttcagatgccaccccggacggtttccgtctgtcttggacagctgatgaaggaata
ttcgacagttttgtactcaaaatcagagatacaaaaaagcagtctgaaccactggaaata
accctcccttcccctgaacgtaccagggatgtgaccgggctcagagaggccactgaatac
gaaatcgaactctatggaataagcaaaggaaggcaatcccaaccagtcagtgccatagca
acaacagccatgggccctccaaaggaaatcacattcacagacatcactgaaaattcagcc
acagtcagctggacggcacccactgcccaggtggaaaacttccggatcacctatgtgccc
atgacaggaggtgacccctccattgtgacagtggatggaagcaaaactgagacacggctg
gtgaaactcacaccagggatggagtaccacgtcagtgtcatcgccatgaagggcttcgag
gaaagcgacccagtctcagggtcactcaccacagctctggatggcccatctggcctggta
acagccaacatcactgactcggaagccttggccatgtggcagccagccattgccaccgtg
gacagctatgtcatctcctacacaggggaaagagtgccagaaatcacgcgcacggtgtcc
gggaacacagtagagtatgctctggctgaccttgagcctgccacagaatatacactgaga
atctttgcggaaaaagggccccagaagagcctcaccatcactaccaagttcaccacagac
ctcgattctccaagagacttgactgctactgacattcagtcagaaactgccctcctcacc
tggcgacctcctcgggcatctgtcactggctacctcctagtctacgaatccgtggatggt
accatcaaggaagtcattgtggggccagacaccacctcctatagcctggcagacctgagc
ccatctacccactacacagcccggatccaggcactgagtggatctctgaggagcaagctg
attgagaccatctttaccacaattggactcctgtatccgttccccagggactgctcccaa
gccatgctgaatggagacacaacctctggcctctataccatttatctgaatggtaacaag
tcccaggcactggaagtgtactgtgacatgacttctgatggaggtggatggattgtattt
ctgagacgcaaaaatggacgggaagacttctatcgaaactggaaggcatatgctgctgga
tttggggaccgcagagaagaattctggcttgggctggataacctgagtaaaatcacagcc
caaggacaatacgagctgcgtgtggacctgcaagaccatggagatacagcctatgccgtc
tatgacaggttcagcgtgggagatgccaagacgcgttataagctgaaagtggagggctac
agcgggacagcaggggactccatggcctaccacaatggcagatccttctcgacctttgac
aaggacacagactctgccatcaccaactgtgccttgtcctacaaaggagctttctggtat
aagaactgtcaccgtgtcaacctgatgggaagatacggagacaacaaccacagtcagggt
gtcaactggttccactggaaggggcacgaatactcaatccagtttgctgagatgaagctg
agacccagcaacttccgaaatcttgaaggcaggcgcaaacgggcataa
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integrated database retrieval system
