Dipodomys merriami (Merriam's kangaroo rat): 138820697
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Entry
138820697 CDS
T11079
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03030
DNA replication
dmer03410
Base excision repair
dmer03420
Nucleotide excision repair
dmer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138820697 (Rfc1)
03410 Base excision repair
138820697 (Rfc1)
03420 Nucleotide excision repair
138820697 (Rfc1)
03430 Mismatch repair
138820697 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmer03032
]
138820697 (Rfc1)
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138820697 (Rfc1)
DNA replication proteins [BR:
dmer03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138820697 (Rfc1)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138820697 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
Rad17
BRCT_2
AAA_14
AAA_22
AAA_17
AAA_5
AAA_16
AAA_33
nSTAND3
AAA_18
AAA_7
RNA_helicase
AAA_30
NTPase_1
NPHP3_N
Abhydrolase_8
TIP49
AAA_19
Motif
Other DBs
NCBI-GeneID:
138820697
NCBI-ProteinID:
XP_069868562
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MDIRKFFGVIPSGKKAVNETVKKNEKTKSAEETLKSKKGIKEIKVNSSCKEDASKQKQTN
RKKRIIYDSDSESEETVQVKNAKKQSEKLPLSSKPSKILRQDPVTYVSETDEDDDFLSKK
TASKSKENGRSKNSYLGVSNMKKNEENTKIKNKPLSPIKLTPTSVLDYFGTGSVRRSDKK
MVASKRKEPSPNTDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
VRKVSGEGEALSSVQDNLNKAEHTYPHPVKTEQLSNERKSYSPNKQTKCEHSKKSQQYSK
SSAHKTGESFSPKNSSKLALTQIKEERSYKESESVASKRKENAIELKEEKKTPQKSKNSP
AKKESVSPEDLEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKTKLERTPQKNNQGKRKSSPIKKESESKKNKLTPKKDSPKK
ALKKETKEANVFPRGPDFSKQVAQETDDDSQARDLADDSSENQVENLLWVDKYKPTSLKT
VIGQQGDQSCANKLLRWLRNWHKSSPEEKKHAAKFGKCAGKDDGSSFKAALLSGPPGVGK
TTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSITGFYSGGSGGAASGSTKH
ALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRP
RVEQIKGAMMSIAYKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKA
DSHRAKKDIKMGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPV
AAGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQ
FPSFPSWLGKHSTTGRHDRLVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGV
EGVQHVVALMDAYYLMKEDFENIMDISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPY
ALQVVRASRSSIGPVLDPEDNEELQEDDSQSDEKDQDGLENDAMIKKKTKSSKSSKPEKD
KESKKGKGKSLKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggagttataccaagtgggaaaaaagctgtaaacgaaact
gtaaagaagaatgagaaaaccaagtctgctgaagaaactttaaaatcaaagaaaggaata
aaggaaatcaaggtaaatagctcttgtaaagaagatgcctccaaacagaaacaaactaac
aggaaaaagaggatcatctatgattcagattcagaatcagaagagacagtgcaggtaaaa
aatgccaaaaagcaatcagaaaaattgccattgtcttccaaacccagtaaaattttacgt
caggacccggttacatatgtttcagaaacagatgaagatgatgactttttgagtaagaag
acagcctcaaaatcaaaagaaaatggaagatctaaaaatagttaccttggagtatcaaac
atgaaaaagaatgaagaaaatactaagattaagaacaagcctttatcaccaataaagctt
acaccaacatccgtacttgattattttggaactggaagtgttcgaaggtcagataagaag
atggtggcaagcaaaagaaaagaaccttccccaaatacagatgattccagattaaatgat
gaagccattgccaagcagttacaacttgatgaagatgcagagctggagaggcaattgcat
gaagatgaagagtttgccagaacattagcaatgttggatgaagagcccaagaccaaaaag
gtccggaaggtctcaggagaaggagaagcattgtcatctgtccaagataatttaaataaa
gcagaacatacatatcctcatccagtaaaaacagaacaattgtcaaatgagagaaagagc
tacagtcccaataagcaaactaagtgtgagcactcaaagaaatctcagcaatattccaag
tcatcagctcacaaaacaggagagtccttttctccaaagaacagttctaagctagcactc
acgcagataaaagaagagcgttcttataaagaatcagagtctgtggcctcaaaaagaaaa
gaaaatgctattgaattgaaagaagagaaaaaaactcctcaaaaatccaaaaattctcct
gctaaaaaagagtctgtaagtccagaagatttagaaaagaaacgcactaattatcaagct
tatcgaagttacttaaatagagaaggtcccaaagctctgggctccaaagaaataccaaag
ggagctgaaaactgcttggaaggccttatatttgtgatcacaggagtcctggaatctatt
gaacgagatgaagccaagtctctcattgaacgttatgggggaaaagtaacaggaaatgtc
agcaagaaaaccaactaccttgtcatgggtcgtgatagtggacagtccaagagtgacaag
gcagcagctttggggacaaaaattattgatgaagatggcctattgaatttgattagaact
atgccaggcaaaaagtccaagtatgaaatagcagttgaagctgagatgaagaaagagaaa
accaaactggagaggacaccccaaaaaaataaccaaggaaaaagaaaaagtagtccaatc
aagaaggaatcagaatctaaaaagaacaagctcactcccaaaaaggacagccctaagaaa
gcattaaaaaaggaaacaaaagaagcaaatgtgttcccaagaggcccggacttcagcaag
caggtggcccaggagacagatgatgacagccaggctagggatttggctgatgacagcagt
gaaaaccaagtggaaaatctgctctgggtggataaatacaagccaacctcgctcaagacc
gtaattggacagcaaggtgaccagagttgtgccaataagctgctccgctggcttcgaaac
tggcataagagttcgcctgaagagaaaaagcatgcagccaagttcggtaaatgtgctggc
aaagatgatggctctagttttaaggcagcgttgctctcaggccctccaggtgttggcaaa
accaccacagcctctttggtgtgtcaggaattgggatacagctatgtggaactaaatgct
agtgacacgcggagcaagaatagcttgaaggcgattgtagccgaatcactgaataatacc
agcatcacaggcttttattcaggtgggtcaggtggagccgcttcaggcagcacgaagcac
gcgctcatcatggatgaagtggatggcatggcaggcaatgaggacaggggagggattcag
gaattaattggcctgataaaacatactaaaattcccattatttgtatgtgcaatgataga
aaccatcccaagattcgctctttggttcattattgttttgatcttcgttttcaaagacct
cgggttgaacaaattaagggtgctatgatgtctattgcatataaagaaggtttaaagatc
ccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtttta
cacaatctgagtatgtggtgtgcacgaagtaaggcactaacctatgaccaggccaaagct
gactctcatcgggccaagaaggatatcaaaatgggcccatttgatgttgcccggaaagtg
tttgcagctggagaggagactgcccacatgtcacttatggacaaatcagatctctttttt
catgactattcaatagcacccctctttgtccaggagaattacctacacgtgaagcctgta
gctgcggggggtgatatgaaaaagcacttgatgctgttgagccgagcggcagatagcata
tgcgatggcgacttagtggacagtcagatccggagtaagcaaaattggagccttctgccc
acccaagccatttatgccagtgttcttcctggagagctgatgagggggtacatgacccag
ttcccctccttccctagctggctggggaagcactcaactacaggcagacacgatcgcctg
gttcaggaccttgcactgcacatgagtcttcgaacttactccagcaaaaggactgtgaac
atggattatctgtctcacatccgggatgcacttgtacggcccctgacctcacagggtgta
gaaggagtgcagcatgtggttgcacttatggatgcatattacttgatgaaagaagacttt
gagaacatcatggacattagcagctggggtggcaaacctagtcccttttccaagctggac
cccaaggtgaaagcagccttcacaagagcttacaataaggaggcccacctcactccatat
gcgcttcaggtggtaagggcgtctagatccagcataggcccagttctggatcctgaagac
aatgaagagttacaggaagatgactctcagtctgatgagaaagaccaggatggtctagag
aatgatgctatgatcaagaaaaagacaaaatcttcaaagtcatcaaaaccagaaaaagat
aaggaatcaaaaaaaggaaaagggaaaagtttgaagaaatga
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integrated database retrieval system
