Dipodomys merriami (Merriam's kangaroo rat): 138820844
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Entry
138820844 CDS
T11079
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04360
Axon guidance
dmer04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138820844 (Slit2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
138820844 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138820844 (Slit2)
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Axon guidance molecules
138820844 (Slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
EGF_TEN
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
138820844
NCBI-ProteinID:
XP_069868848
LinkDB
All DBs
Position
Unknown
AA seq
1529 aa
AA seq
DB search
MPGVGWQMLSLTLGLVLAIVNPAAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFTGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSALR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILFTSNRLESVRHK
MFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPVECTCLDTVVRCSNKGLKILPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPSRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGEKEGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYIGEHCDIDFDDC
QDNKCTNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVQPQTNITFQIATDEDSGILLYK
GDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGS
PKIITNLSKQSTLNLDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDF
QKVPMQTGILPGCEPCHKKVCAHGTCQPGSPTGFTCECEEGWMGPLCDQRTNDPCLGNKC
VHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQTIKCKHGKCRLSGLGQPYCECSS
GYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCVGGQCCGPLRSKRR
KYSFECTDGSSFVDEVEKVVKCGCMRCIS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcggctggcagatgctgtccctgacgctggggttagtgctggcgatcgtg
aacccggcggccccgcaggcgtgtccggcgcagtgctcctgctcgggcagcaccgtggac
tgtcacggattggcactacgcagtgtgcccaggaatatcccccgcaacaccgagcgactg
gatctgaatggaaataacatcactcggattacgaagacagattttactgggctcaggcac
ctcagagttcttcagcttatggagaacaagattagcaccattgaaaggggagcattccag
gatcttaaggaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgttgtttcttgggacatcgaagctatacaggcttgatctcagtgagaatcaaatccag
gccattccaaggaaggctttccgaggggcagttgacattaaaaatttgcaactggattac
aaccagatcagctgtattgaagatggggcttttcgggctctccgggacctggaagtgctc
actctcaacaataacaatattacaaggctttctgtggcaagtttcaaccatatgccaaaa
cttcgaacttttcgactccattccaacaacctgtattgtgactgccacctggcctggctc
tctgactggcttcgccaaaggcctcgagtaggcctgtacacacagtgtatgggcccttcc
cacctgaggggtcataatgtcgccgaggttcaaaaacgagaatttgtctgcagtggtcac
cagtcattcatggctccttcttgtagtgttttgcactgccctgctgcttgtacctgcagc
aataatattgtggactgccgtgggaaaggtcttactgagatccccacgaatctgccggag
accatcacagaaatacgcttggaacagaactcaatcaaggtcattcctcccggagctttc
tcaccatacaaaaagctccgaagaattgacctgagcaataatcagatctctgaacttgca
ccagatgctttccaaggactccgctctctaaattcacttgtcctctatggaaataaaatc
acagaactccccaagagtttatttgaaggactattttccttacagctgctattactgaat
gccaacaagataaactgcctccgtgtagatgcttttcaggatctgcacaacctgaacctg
ctctccctgtacgacaacaagctgcagaccattgccaaaggcaccttttcagctctccgg
gctatccaaacgatgcatctggcgcagaacccctttatttgtgactgccatctgaagtgg
ctggcggattatctccataccaaccccattgagaccagcggtgcccgctgcaccagcccc
cgccgcttggcaaacaaaagaatcggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggtacagaagattaccgatcaaaattaagtggagactgc
ttcgcagatttggcttgtcctgaaaagtgccgttgtgaagggaccacagtagattgctcc
aaccagaaactcaacaaaatcccagaccacattccccagtacactgcagagctgcgtctc
aataacaatgaattcacagtgttggaagccacaggaatctttaagaaacttcctcaatta
cgtaaaatcaattttagcaacaataaaatcacagatattgaggagggagcatttgaagga
gcatctggggtaaatgaaatacttttcactagtaaccgtttggaaagtgttcggcataag
atgttcaaaggattggaaagcctcaaaactttgatgttgagaagtaatcgcataagctgt
gttgggaatgacagctttataggactcagttctgtacgtttgctttctttgtatgataat
caaattactacaattgcaccaggggcgtttgacacactccattccttatctactctaaac
ctcttggccaatccttttaactgtaactgctacctggcttggttgggagagtggctcagg
aagaaaaggattgtaaccggaaatcctcgctgtcaaaagccatacttcctcaaagaaatc
ccaatccaggatgtggccattcaggatttcacttgtgatgatggaaacgatgacaatagt
tgctctccactgtctcgctgtcctgtggaatgtacctgtttggatactgttgtccgatgt
agcaacaagggcttaaagatcttgccaaaaggaattccaagagatgtcacagagttgtat
ctggatggtaaccaatttacactggttccaaaggaactctctaactacaagcacttaaca
cttatagatttaagcaacaaccgaataagcactctttcgaatcaaagcttcagcaacatg
acccaacttctcaccttaattcttagttataaccggctgagatgtattccttcccgaaca
tttgatggattaaagtctcttcgattactatctttacatggaaatgatatttctgtcgtc
cctgaaggtgctttcaatgatctttctgcattatcacacctagcaattggagccaaccct
ctttactgtgattgtaacatgcagtggttatccgactgggtaaagtcggaatataaggaa
cctggaattgctcgctgtgctggtcctggagaaatggcagataaattgttacttacaact
ccctccaagaaatttacctgtcaaggtcctgtggatgtcaatattctggctaaatgtaac
ccttgtctgtcaaatccctgcaaaaatgacggcacctgtaacaacgatccagttgacttc
taccggtgtacttgtccatatggtttcaaggggcaagactgcgatgtcccaattcatgcc
tgcatcagtaacccatgtaagcacggagggacttgccatctgaaagaaggagaaaaggag
ggattctggtgtatttgtgctgatggatttgaaggagaaaactgtgaaatcaatgttgat
gattgtgaagataatgattgtgaaaataattccacctgtgttgatggaattaataactac
acatgcctttgtccacctgagtacacaggcgagctgtgtgaggagaagctggacttctgt
gctcaggacctgaacccctgccagcatgactccaagtgcattctgaccccaaaaggatac
aagtgtgactgcacaccaggatacatcggagagcactgtgacatcgattttgatgactgc
caagataacaagtgtacaaatggtgcccactgcaccgatgcagtgaacggctacacatgc
atctgtcccgaaggttacagtggcttgttctgtgaattttctccacctatggttctgcct
cggaccagcccctgtgataattttgattgtcagaatggagctcagtgcatcatcaggata
aatgagcccatatgccagtgtttacctggctaccagggagagaagtgtgaaaaattggtc
agtgtgaattttgtaaacaaagagtcgtaccttcaaattccttcggccaaggtgcagcca
cagacaaacatcacctttcagattgccaccgatgaagacagtggcatcctcctgtataag
ggtgacaaagaccacatcgctgtggaactctaccgcgggcgcgtgagggccagctatgac
accggctcccacccggcttctgccatttacagtgtggagacaatcaatgatggaaacttc
catattgtggagctgcttgccctggatcagagtctctccctctccgtggatggagggagc
cccaaaatcatcaccaacttgtcgaaacagtccactctgaatctcgactctccactctat
gtaggaggcatgcctgggaagaacaacgtagcatctctacgccaggcccccgggcagaac
ggcaccagcttccatggctgcatcaggaatctttacatcaacagtgagctacaggacttt
cagaaggttcccatgcagacaggcattctgcccggctgtgagccatgtcacaagaaagtg
tgtgcccatggcacctgccagcctggcagcccgacgggcttcacctgcgagtgtgaggag
ggctggatggggccgctctgcgaccagcggaccaatgacccctgccttggaaacaaatgc
gtgcatgggacttgcttgcccatcaacgcattctcctacagctgcaagtgcctggagggc
catgggggcgtcctctgtgatgaagaagaagatctcttcaacccctgccagaccatcaag
tgtaaacacggcaagtgcaggctctcgggactcggacagccctactgtgaatgcagcagt
ggatacactggggacagttgtgaccgagaaatctcttgtcgaggggagcggatcagagat
tattaccaaaagcaacagggctacgccgcctgtcaaacaacgaagaaggtctctcgtttg
gaatgtagaggcgggtgtgttggtgggcaatgctgtggacctcttaggagcaagagacgg
aaatactcctttgaatgcacggacggctcttcctttgtggatgaagttgagaaggtggtg
aagtgtgggtgtatgaggtgcatatcctaa
DBGET
integrated database retrieval system
