Dipodomys merriami (Merriam's kangaroo rat): 138821045
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Entry
138821045 CDS
T11079
Symbol
Rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138821045 (Rc3h2)
04121 Ubiquitin system [BR:
dmer04121
]
138821045 (Rc3h2)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
138821045 (Rc3h2)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138821045 (Rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
138821045
NCBI-ProteinID:
XP_069869241
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVPTTAGNVISVI
GSTETTGKIIPSTNGISNAENSVSQLIPRSTDNTLRTLETVKKVGKVGSNGQNPAGPSAE
SVTENKISSPPKTPVSNVAATSAGPSNAGTELNPVPPKSSPFLTRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSSNVPESSLPPASMPYADHYST
FSPRERMNSSPYQPPPPQQYGPVPPVPSGMYAPVYDSRRIWRPAMYQRDDIIRSNSLPPM
DVMHSSVYQPSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGSKFEEDHLSHYSPWSC
GTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSEATSS
AHYVERDRFIVTELSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEG
RHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQNEQIEEILDMQ
LGISSQNDHLLNGTAVENGHPVQQHQKESLKQKRQSLGEDHVILEEQKTILPVTSCFSQP
LPVSISNASCLPITTSVSVGNLILKTHVMSEEKNDFLKPVANGKMVNS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagacagccatcaacacagac
attgatgtacttcctgtcaactttgcacttctccagttggttggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgaaaataaacattatgaagttgcaaaaaaa
tgtgttgaagatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagtcgtccaatgcaaaggaaactagtgacacttgtgaactgt
caactggtggaggaagaaggtcgtgtcagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactgatattacagcaccagaaccctcagcaattgtctgccaatcta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagttggtgttgctggcattagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagat
tcttccctaatgcagctaaaggaggaatttcggagttatgaggcattgcgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcttcgcttctgtatggtgacttggctcataaatcacacatgcagtctatcattgataag
ctgcagtctccagagtcatttgcaaaaagtgtccaggaattgacaattgtcttgcaacga
acaggtgacccggctaacttaaatagactgaggcctcatttagagcttctagcaaacata
gaccctaatccagacgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggtcttgtagacttcatacagaattatagtagaaaaggccat
gagacacctcagcctcagccaaatagcaaatataagactagcatgtgccgagatttgcga
cagcaaggaggttgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaaaatcaatgcaactgtaagaacgtttcctctccta
aataaagttggtgtaaacaacactgtcccaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaactgggaaaattattccaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtactgataatacattaagaactctagagact
gtgaagaaagtggggaaggttggctccaatggtcagaatcctgctgggccctctgcagag
tctgtaactgaaaataaaattagctctccacccaagactcctgtaagtaatgtagcagct
acctcagctggcccatctaatgctggaacagagctgaatcccgtgcctcccaagtctagc
ccattcctaactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacaaacaggatactaccca
ccacctccaacggtgccagctggtgtggctccttgtgttcctcgctttgtgaggtccagt
aatgttccagagtcctccctcccacctgcttccatgccatatgctgatcattacagtaca
ttctcccctcgagagcgaatgaattcttctccttaccagcctcctcctccgcagcagtat
ggaccagttcctccagtaccttccggaatgtatgctcctgtgtatgacagcaggcgcatc
tggcgccctgcaatgtatcaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcattcatctgtctatcagccatctttgcgggaaagatataactcattagat
ggttattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agagaaccttgtggtcatttgaagaccagttgtgaagagcagataagaagaaagccagat
caatgggcacagtatcatactcagaaagcacctgtctcttcaactcttcctgtggcaaca
cagtcaccaacaccaccttctcctctattcagtgtagactttcgaacagatttttctgag
agtgtgagtggttcaaaatttgaagaagatcatctttcccattattctccttggtcttgt
ggcaccataggctcctgcatcaatgccatcgattcagaacccaaagatgtaattgctaat
tcaaatgctgtgttaatggatctggacagtggagatgttaagagacgagtgcatttattt
gaaactcagagaaggacaaaagaagaagacccaataattccctttagcgatggacccatc
atctcaaaatggggtgcaatttcccgatcttcccgtacaggttaccatactacggatcct
gtccaggccactgcttcccaaggaagtgcaactaagcccattagcgtatcagattacgtc
ccttatgtcaacgctgttgattcaaggtggagttcttatggtagtgaggctacatcatca
gcacactatgttgaacgggacagatttattgttactgagttatctggtcatagaaagcat
tccagtactggagaccttttgagcattgaacttcagcaggccaaaagtaactcattactt
cttcagagggaggctaatgcattggccatgcaacagaagtggaattctttagatgaaggc
cgtcaccttaccttaaatcttctaagcaaggaaattgaactgagaaacggagagagtgat
tatacagaagatgctgctgatactaagcctgatagagatattgagttagaactttcagca
cttgatacagatgaacctgatggacaaaatgagcaaattgaagagatcctagacatgcaa
cttggtatcagttctcaaaatgatcatttgctgaatggaacagcagttgaaaatggccac
ccagtccagcagcaccagaaggagtcactgaaacagaagagacagagcttaggtgaagac
catgtgattctggaggagcaaaaaacaattctaccggtaacatcttgctttagccagcca
ctcccagtgtctattagcaatgcaagttgtctccccatcaccacatctgtcagtgttggc
aaccttatcctgaaaactcatgttatgtctgaagagaaaaacgactttttaaaacctgtt
gcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
