Dipodomys merriami (Merriam's kangaroo rat): 138821232
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Entry
138821232 CDS
T11079
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138821232 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138821232 (Polr1b)
Enzymes [BR:
dmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138821232 (Polr1b)
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138821232 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
138821232
NCBI-ProteinID:
XP_069869466
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDSGGRWRNLPSGPSLKHLTDPSYRLPPEQQKAALQDLTRAHVDSFNYAVQEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGTICKELNVYPAECRGRRSTYRGKLTADISW
AVNGITKGVIKQFLGYVPIMVKSKVCNLHGLSPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPLALVRPKWKSRGPGYTHFGVSMYCVREEHSAVNMNLHYVENGTVTLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNLPDWYPNEQAAEFLFNQCICIHLSTNTEKFYKLCFMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLRFLKEKMETWLVSIKIALDKRAQKTNVSVNSENLMKIF
SMGADLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQSVYTTSIPALLCSLGVT
PVDGTPHQPYGKCYPVLLDGVMVGWVDKELAPGIEDSLRRFKVLREKKISPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNIAIFEDEILAGITTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPFMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGTVYKSEFID
LSEKIKQGDDSFVFGVKPGDPRIVQKLDDDGLPFIGAKLQHGDPYYSYLNLNTGENFVVY
YKSKENCVVDNIKVCSNDSGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNYYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDGSVAHVCVRCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggattctggaggtcggtggaggaacttgcccagtggacctagcttaaagcatttgacg
gacccctcttaccggctcccgccagagcagcagaaggcggctttgcaggacctgacacgt
gctcatgtggactccttcaactacgcggtgcaggaggggctcagccacgcggtgcaggct
atccctccctttgaatttgctttcaaagatgaacggatctctcttactattgtggatgct
gtcatcagtccaccaacggttccaaaaggtaccatctgcaaagagctcaacgtttatcca
gcagaatgccgaggccggaggagtacctaccgtgggaagctgacagctgatatcagctgg
gcagtgaatggaatcacaaaaggagtcattaaacagtttcttggctatgttcccattatg
gtgaagtctaaggtttgcaacttacatggcctttctccacaagccctcattgagcatcat
gaggaggcagaggaaatgggaggctattttattatcaatggcattgaaaaagttatccga
atgttgattatgcctcggaggaattttccccttgcactggtaagaccaaaatggaaaagc
agaggccctggttatactcactttggagtctctatgtactgtgtaagggaggagcattct
gctgtcaatatgaatcttcactatgtggaaaatggcactgttacattgaactttatttac
cggaaagaactgttttttcttcctttgggatttgcacttaaggcacttgtcagcttttct
gattatcagattttccaggagctcatcaaaggaaaagaggatgactctttctttaggaat
tctgtttctcagatgttaaggattgtgatggaagagggttgttccacacaaaagcaagtc
cttaactatctaggagaatgcttcagagtaaaactcaatcttcctgactggtaccctaat
gaacaagctgccgagtttctatttaaccagtgcatctgcatccacttgagcaccaatact
gaaaagttttataagctctgcttcatgacccggaagctctttgctttagccagaggagag
tgcatggaggacaatcctgatagtttagtgaatcaagaagtccttacgcctggccagctc
ttccttaggtttctcaaggaaaaaatggaaacttggttagtgtctattaaaatagcttta
gataaaagggctcagaaaaccaatgtgtccgtaaacagtgaaaatttgatgaagattttt
agtatgggagcggaccttacaagaccatttgaatacctccttgcaactgggaatctgcgt
tcaaaaacaggtcttggcttcctgcaagattcaggactgtgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggagctgcttttgcgaag
atgaggaccaccacagttcgcaggctgctgccagagtcctggggcttcctttgtcctgtg
cacaccccagatggggagccctgtggactgatgaaccacttaactgccatatgtgaggtc
gttacacaatctgtgtatacaacgtctattccagccttgctctgcagcttgggagtcact
ccagttgatgggacaccacaccagccctatggcaagtgctacccagtcctgctggatggt
gtcatggtgggctgggtggataaggagcttgctcctggcattgaagattctctccggcgt
tttaaggtattgagagagaaaaagatttctccctggatggaggtggtccttatccctatg
acaggaaagccaagtctgtaccctgggctgtttctcttcaccactccttgcagactggta
cggcctgtgcaaaacttggagctaggtaaagaagaactgattggaactatggaacagctc
ttcatgaacattgctatctttgaagatgagattcttgcgggaattaccactcaccaggag
ctcttcccccatagcctgctgagtgtgatcgccaactttatcccattctctgatcacaat
cagagtccccgcaacatgtaccagtgccagatgggtaaacagactatgggctttccactt
ctcacttaccaagacagatctgataataaactctaccgtcttcagactccacaaagtcct
ttagtaagaccattcatgtatgactattatgacatggataattatccgataggaacaaat
gctatcgttgctgtgatttcttatacgggctatgatatggaagatgccatgattgtgaac
aaggcttcttgggagcgaggctttgcgcatggaactgtctacaagtctgagttcatagac
ctctctgaaaagatcaaacaaggagatgatagttttgtgtttggggtcaaacctggtgac
ccacggattgtgcagaagttagatgatgatggattgccattcataggagcaaagctgcaa
catggagacccctattacagctacctaaacctcaacactggggagaacttcgtggtttac
tataagagtaaagaaaattgtgtagtggataatatcaaagtgtgcagcaacgattctggg
agtgggaagttcaagtgtatctgtatcaccatgcgagttccccggaacccaactattgga
gataaatttgccagtcgtcatgggcagaagggcattttgagcagattgtggccagctgag
gacatgcctttcactgagagtgggatggtgcctgacattctgttcaatcctcacggtttt
ccatcccgcatgaccattggcatgctaatcgaaagtatggctggaaagtctgcagctctg
catggtctctgccatgatgccacacccttcatcttctctgaagagaactcggccttagaa
tactttggtgagatgttgaaggctgccggctataactactatggcactgagaggttgtat
agtggcatcagtggggtggaattggaagcagacattttcataggtgtagtttattatcaa
cgtttacgccacatggtatctgacaaatttcaggttaggacaactggagctagggacaaa
gtcaccaaccagcctgttgggggaagaaatgtccagggtggaatccgttttggggagatg
gaacgggatgctcttttggctcatgggacatcttttcttctgcatgaccgcctcttcaac
tgctctgacggctcggtagctcatgtgtgtgtcagatgtggcagtctgctctctcctttg
ttggagaagccacccccttcttggtctgccatgcgtaaccgaaagtacaattgcaccctg
tgtaatcgcagtgacaccattgacactgtttctgttccttacgttttccggtattttgta
gctgaactggcagccatgaacatcaaagtgaaattggatgtcgtttag
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integrated database retrieval system
