Dipodomys merriami (Merriam's kangaroo rat): 138821381
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Entry
138821381 CDS
T11079
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138821381 (Gapvd1)
Membrane trafficking [BR:
dmer04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138821381 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
138821381
NCBI-ProteinID:
XP_069869669
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRLALDNLLANLPQAKPGKSSSLEMTPYSTPQMSPATTPANKKNRLPI
GQQLAAITAWDSSATNLTSHITLVTPFATRSRSRSNMLVDLHMDHEGSSQETIQEVQPEE
VLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIEEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDEITHGAHQ
LTSPPSQSESLLAMFDPLASHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPN
FGSHILTPAEMEAFRQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEERELPPAA
AIGATSLVAACHSSSSSPSKDSSRGETEERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPF
RKKEKQEKDKDDLGPDRFSTLTDDPSPRLSAQAQVAEDILDKYRNAIKRSSPSEGAMANY
ESTEVLADGESAHDSPRDETLQNISADDLPDSASQAAHPQDSAFSYRDAKKKLRLALCSA
DSVAFPVLTHSTRNGLPDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRF
DNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTT
VCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQ
DAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLRE
APWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLI
KANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttagatatccatactctggcccatcacctcaaacaggagcgattgtatgtg
aactctgagaaacagctcattcagaggctgaatgcagatgtacttaagacagctgaaaag
ttgtatcgtacagcatggattgcaaagcaacagagaattaatttggatcggcttattata
accagtgcggaagcttccccagctgaatgttgccaacatgccaagattttggaagataca
cagtttgttgatggatataagcaattgggatttcaggagacagcttatggagaattctta
agtcgattaagggaaaatcctcgtcttattgcatcctccttggttgctggagagaagctt
aatcaggagaacacacaaagtgttatttacacagtttttacctccctatatggcaattgc
ataatgcaagaagatgaaagctacctccttcaggttttgcgatacttgattgagtttgaa
cttaaagaaagtgacaaccccaggcgacttttgaggagaggaacttgtgccttcagcatc
ttatttaaactgttttctgaaggactcttttctgcgaaacttttcctcacagctacttta
catgagccaatcatgcagctgcttgttgaagatgaggatcacctagaaacagatccaaac
aagctaattgagagattctcccctgcacaacaggaaaaactctttggagagaaaggctca
gatagattcaggcaaaaggttcaagagatggtggattccaatgaagccaaactagtggct
ttggtgaacaaatttattggttatctcaaacagaacacatactgctttccacatagtctg
aggtggattgtgtctcagatgtacaagacactctcctgtgtagatagactagaagttgga
gaggtcagagcaatgtgtactgatctcctgttggcttgcttcatttgtcctgcagttgtc
aacccagagcagtatgggataatttctgatgctcctattaatgaagtggcacgatttaac
ctgatgcaggttggtcgtcttttgcaacaactagcaatgactggctctgaagagggtgat
ccccggacaaaaagcagccttggaaaatttgacaaaagttgtgtggctgcttttcttgat
gttgtgattgggggccgtgcagtcgagactcctcccatgtcatctgttaatcttctggaa
ggattgagcagaaccgtggtttatataacctacagtcagctaattactctggtgaatttt
atgaagagtgtgatgtctggagatcaactgagagaagatagactggctcttgacaatttg
ttggcaaacttaccacaggcaaagccgggaaagagcagcagtttagaaatgactccctac
agtactcctcagatgtctccagcaaccactccagcaaacaaaaagaacagattgcctata
ggacaacagttagcagccatcactgcctgggattcctcagctaccaaccttacttcgcac
attacattagtcaccccatttgcaactcggagcagaagtcgcagtaatatgctagtggat
ctacatatggaccatgaaggatcatctcaagaaactatccaggaagtacaaccagaagag
gtgttggtcatttccttagggacaggtccccagcttactccagggatgatgtcagaaaat
gaggtcctaaatatgcagctttcggatggagggcaaggagatgtccctgttgatgaaaac
aaactccacggtaaacctgataaaacgttgcgcttttccctctgcagtgataatctggaa
ggcatatctgaaggtccttcaaatcgctccaattcggtgtcttctctagacctggaagga
gagtctgtgtcagaacttggagcaggaccttctgggagtaatggagttgaagctctacaa
ctgttagaacatgagcaagctaccacgcaagataatcttgatgataagctaaggaagttt
gagattcgtgacatgatgggtctaacagatgatagagacatatcagaaacagtgagtgag
acctggagtacagatgtcctgggaagtgactttgaccctaacattgaggaagatcgctta
caagaaattgcaggtgcagcagcagagaacatgttgggcagtttactgtgcctcccaggt
tctgggtcagtgcttcttgacccctgcacaggttctaccatatcagaaacaacaagcgaa
gcttggagtgtagaggtattaccaagtgactcagaggccccagacttaaagcaagaggag
cgcctacaagagctggagagttgttctggactgggcagcacatctgatgatacggatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtccggaataagtgca
acatctgaggacattcccaataagattgaagacctcagatctgagtgcagctctgatttt
gggggtaaagattctgtcactagtccagatatggatgaaataactcatggtgcccaccag
ctgacctctcctccttctcagtcagagtctctgctcgccatgtttgatccacttgcttct
catgaaggggcttctgctgtggtaagaccgaaagttcactatgctaggccatcacatcca
ccaccagatcccccaatcctggaaggagcagtgggaggaaacgaggccaggctgcccaac
ttcggttctcacattttaactcccgctgaaatggaggcattcagacaaaggcactcttac
cctgagagactagttcgaagcaggagttctgacatagtttcttctgttcgacggcccatg
agtgatcccagctggaatcgacgtccaggaaatgaagagcgagaacttcctccagccgca
gccattggtgctacttctttggtggctgcatgtcactcatcgtcatcatccccgagtaaa
gactcctccagaggagagactgaagaacgcaaagatagcgatgatgagaaatcagacagg
aacagaccttggtggagaaaacgttttgtttcagccatgcctaaagctcctataccattt
agaaagaaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaaca
ctcacagatgatcccagccctaggctcagtgcacaagctcaggttgctgaagacattctg
gacaagtaccggaatgccattaaacggagcagccccagtgaaggagcaatggcaaactat
gaaagtacagaggtcttggctgatggtgaaagtgcacatgattctcctcgtgatgaaact
ctacagaacatctcagctgatgatctccctgactctgccagccaagcagcccaccctcag
gactcagctttctcctacagagatgcaaaaaagaaactgaggcttgctctttgctctgcg
gactctgtcgccttcccagtgctaactcattcaacaaggaatggattgccagaccataca
gacccagaagacaatgaaattgtgtgcttcttaaaagttcaaatagctgaagcaatcaat
ttacaagacaagaacttaatggctcaacttcaggaaaccatgcgctgcgtgtgccgcttt
gataacaggacctgcaggaagctgctggcgtccatcgctgaggactacaggaaaagagcc
ccgtacatcgcttatctcacacgctgtcgacaaggactgcagaccacacaggctcacctg
gaaaggctcttgcaaagggttttgcgggacaaagaggtggctaatcggtattttaccact
gtttgtgtgagattattgcttgagagcaaagaaaagaagatcagagaattcattcaagac
tttcagaaactcacagcagctgatgataaaactgctcaagtagaagattttctgcagttc
ctttacggtgcaatggctcaggatgtcatctggcaaaatgccagtgaagaacagcttcag
gatgcccagttggctatcgaacgaagtgtgatgaaccggattttcaagcttgctttctat
cctaatcaggatggggacatacttcgtgaccaggttcttcatgaacatatccagagattg
tccaaagtggtaactgcaaaccacagagctcttcagataccagaggtgtatcttcgggag
gcaccgtggccatctgcacagtcagaaatcaggacaataagtgcatacaaaaccccccgg
gacaaagtgcagtgcatcctgagaatgtgctccaccatcatgaacctcttgagcctggcc
aacgaggactccgtgcccggggcagatgactttgtccccgtgttggtgttcgttctcata
aaggcaaacccaccctgtctgctgtccaccgtgcagtatatcagtagcttctacgccaac
tgtctgtctggggaggagtcctactggtggatgcagttcacagcagctgtggaattcatt
aaaaccattgatgaccggaagtga
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