KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138821426
Entry
138821426         CDS       T11079                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11-like isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04114  Oocyte meiosis
dmer04120  Ubiquitin mediated proteolysis
dmer04218  Cellular senescence
dmer04310  Wnt signaling pathway
dmer04340  Hedgehog signaling pathway
dmer04390  Hippo signaling pathway
dmer04710  Circadian rhythm
dmer05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138821426
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    138821426
   04340 Hedgehog signaling pathway
    138821426
   04390 Hippo signaling pathway
    138821426
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    138821426
   04218 Cellular senescence
    138821426
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    138821426
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    138821426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dmer04121]
    138821426
   03036 Chromosome and associated proteins [BR:dmer03036]
    138821426
Ubiquitin system [BR:dmer04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     138821426
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     138821426
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C EIF3I DSE1_N WD40_MABP1-WDR62_2nd Beta-TrCP_D WD40_Gbeta Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 CFAP251_N F-box-like ANAPC4_WD40 Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_Aladin PAC11 Beta-prop_SPT8 NBCH_WD40 Beta-prop_VPS8 Beta-prop_DCAF4 TRM82_WD Beta-prop_HPS5 Beta-prop_IFT140_1st F-box WD40_like Beta-prop_WDR11_2nd Beta-prop_NOL10_N Beta-prop_Nup120_160 WD40_RFWD3 DUF1513 WD40_2 DUF7899 RasGEF_N_2 DUF4508 HEAT_ATR
Other DBs
NCBI-GeneID: 138821426
NCBI-ProteinID: XP_069869731
LinkDB
Position
Unknown
AA seq 563 aa
MEPDSVIEDKTIELMCSVPRSLWLGCASLVESMCALSCLQSMPSVRCLQNTSVMEDQNED
ESPKKDTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRM
CHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVIS
EGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETI
ESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGH
TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKD
RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL
NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG
AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDF
LNVPPSAQNETRSPSRTYTYISR
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggagcccgactccgtgattgaggacaagaccatcgagctcatgtgttctgtgccaagg
tctttgtggctaggctgcgccagcctggtagagagcatgtgcgcactgagttgcctgcag
agcatgcccagtgtcagatgtctccagaacacatcagttatggaagatcaaaatgaagat
gagtccccaaagaaagatactctctggcagataagcaatggaacatcatctgtgatcgtc
tccagaaagaggccatcagaaggaaactaccagaaagaaaaggacttgtgtattaaatat
tttgaccagtggtctgaatcagatcaagtggagtttgtggagcatcttatttcacgaatg
tgtcattatcagcatggacatattaactcttacctgaaacccatgttgcagcgggacttc
attacagcgttaccagagcaaggcttagatcatatagcagaaaacattctttcctacctg
gatgcccggtccctgtgtgcagctgagctggtgtgcaaggagtggcagcgtgtgatctca
gaaggaatgctgtggaagaagctgattgaaaggatggtacgcaccgatcctctgtggaaa
gggctgtctgaaagaagagggtgggatcagtatctgtttaaaaacagacccacagatggc
cctcctaattcattttatagatctttatacccaaagattatccaggatatagagactata
gaatccaactggcggtgtgggcgtcataacttgcagagaattcagtgccgctccgaaaac
agtaaaggagtctactgtctacaatatgatgacgaaaaaattatcagtggcctgcgggat
aattctattaagatttgggataaaaccagtctggaatgtttgaaagtgttaacaggacac
acaggctctgtcctctgtctccagtatgacgagcgtgtcattgtaactggctcttcagat
tctacggtgagagtgtgggatgtgaacacaggtgaagttctgaacacactgatccatcac
aatgaagctgtactgcacttacgcttcagcaatggactgatggtgacgtgctccaaggat
cgctccattgctgtgtgggacatggcctctgccactgatatcactttacgccgtgtcctg
gttggacaccgcgctgctgtcaatgtagtagactttgatgacaagtacattgtgtctgct
tctggagacaggaccatcaaagtctggagcactagcacctgtgaatttgttcgtactctt
aatgggcataagcgaggtattgcctgcctccagtaccgggatcggctagtcgttagtgga
tcatcagataacaccatcaggctatgggacatcgaatgtggtgcctgtttaagagttctg
gagggacatgaagagttggtccgatgcattcggtttgacaacaagaggattgtcagtggt
gcctatgatgggaaaattaaagtttgggatttgcaagctgcccttgaccctcgcgctcca
gcaagcaccctgtgtttgcgcactctggtggaacattctggacgcgtgtttcggctgcag
tttgatgagtttcagatcatcagcagctcccatgacgacactattttgatttgggatttc
ttaaatgtgcctcccagtgctcaaaacgagacacgttctccctccagaacatacacttac
atctccagataa

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