KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138821856
Entry
138821856         CDS       T11079                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03030  DNA replication
dmer03410  Base excision repair
dmer03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138821856
   03410 Base excision repair
    138821856
   03420 Nucleotide excision repair
    138821856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dmer03032]
    138821856
   03400 DNA repair and recombination proteins [BR:dmer03400]
    138821856
Enzymes [BR:dmer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     138821856
DNA replication proteins [BR:dmer03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    138821856
DNA repair and recombination proteins [BR:dmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      138821856
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N GARP CENP-B_dimeris
Other DBs
NCBI-GeneID: 138821856
NCBI-ProteinID: XP_069870412
LinkDB
Position
Unknown
AA seq 2284 aa
MVLRNSGRRRAEPDGDGEASRDDGPSSSASALKRLERSQWTDKMDSRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALTYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVRKNREQ
DHASNAYTAMLSSVLQGGSVITDEEETSKKTTEQLENIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGTAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAVHGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTEDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFDEVC
EQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPALFPDGPTRAFHELSREEQAKYEK
RRLADYCRKAYKKVHVTKVEERFTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEAGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNTKKPKVTISYPGAMLNIM
VKEGFTNDQYQELAEPSSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVRNPVPRVKHPDWLHRKLLEKNDVYKQKKISDLFVLEGRRQIVTAQI
PEGSPRPSAPDMEDFGLTKQIHSAVPVATKRKRVLWESQQDSQDLELTVPWKEILGQPPI
LGTTQEEWLVWLGFHKKKWQLQAQQRVVRRKRQRRELTEGAPRPGTVREGPVTGLGSFLR
KTARSILDLPWQIVQISETNQAGLFRLWAIIGSDLHCIKLSIPRVFYVNQRVAKVEEGPS
YRKVNRALPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHINLYHHAQGHKALF
GIFIPSQRRASVFVLDTVRSNQMPSLSALYSAEHSQLLEKMGPELLPPPKHTFEVRAETS
LKTICRAIQRFLLAYKEERRGPTLIAVHSNWELRRLASEVPVLEEFPLVPVRVAEKISYG
VLDWQRHGARRMIQHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTSRPDLGGKEADDSRLVMEFDDRATVEINNSGCYSTVCVELDIQNLAVNTIL
QSHHINDMEGAGSMGISFDVIQQASLEDMVTGNQASSAPASYDETALCSSAFRILKSMVV
GWVREITQYHNIYADNQVMHFYRWLRSPCSLLHDPALHRTLHSMMKKLFLQLVAEFKRLG
SSVIYANFNRIILCTKKRRIEDAIAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGKVPSSIHCGQQDSQIGEGAKDKQEDEEEEEEEEEEEGVEESEVEDLLESNWNI
LQFLPQAASCQSYFLMIISAYIVAVYHSMKDELRRSAPGSTPVRRRGASQFSQEPEVAAG
ALPGMITFSQDYVANELTHSFFTITQKIQKKITGSRNSTEPSEMFPVLPGSHLLLNNPAL
EFIKYVCKVLSLDTNITNQVNKLSRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICHNCN
FCRDLDLCKDASFSQDGTVLPQWFCSNCQAAYDSAAIESALVEALQRKLMAFTLQDLICL
KCRGVKETHMPEYCSCAGDFALTIHTQIFMEQIGIFQNIAQHYGMLYLQETLEWLLHTGP
LSSS
NT seq 6855 nt   +upstreamnt  +downstreamnt
atggtcctgaggaacagcgggcggcggcgcgcggagccggacggggacggcgaggccagc
cgggatgatggcccctcttcctcagcatctgcgctcaagcgcctggagaggagccagtgg
acagataagatggattcgaggtttggttttgagaggttgaaggagcctggtgaaaagact
ggctggcttatcaatatgcaccctacggagattttagatgaagataaacgcttagtcagt
gcagtggattactactttattcaagatgatgggagcagatttaaggtggccttgacctat
aagccatatttctacattgcaactagaaagggttgtgagcgagaagtttcatcttttctc
tccaagaagtttcagggtaaaattgccaaagtagaaactgttcccaaagaggacctggac
ctgccaaatcacttagtgggtttgaagcggaattacatcagattgtcttttcacactgtg
gaagaccttgtcaaagtaaggaaggagatttcccctgctgtgagaaagaaccgggagcag
gaccatgccagcaatgcgtatacagcaatgctgtccagtgttctgcaagggggtagtgta
attactgatgaagaagaaacctctaaaaaaacaactgaacagttggaaaacatagtggac
atgagagagtatgacgttccctaccacatccgcctttccattgaccttaagatccacgtg
gctcattggtacaatgtcagatacaggggaactgcctttccagtggagattactcggaga
gacgaccttgtggaacgacccgaccctgtggtattggcatttgacattgagacaactaaa
ctacccctcaagtttcctgatgctgagacagaccagattatgatgatctcctacatgatt
gatgggcagggctacctcatcactaacagggagattgtgtcagaagatattgaagacttc
gagttcacccctaagccagagtatgaagggcccttttgtgtcttcaatgagcctgatgag
gtccatctaatccagagatggtttgagcatgtccaggagaccaaacccaccatcatggtc
acctacaatggggacttttttgattggccatttgtggaagccagggcagcagttcacggc
ctgagcatgtaccaggagataggcttccagaaggacagccagggggagtacaaggcacca
cagtgcatccacatggactgcctcaggtgggtaaagagggacagctaccttccggtgggc
agtcataatctcaaggcagctgccaaggccaagcttggctatgaccctgtagaactggac
cctgaggacatgtgccggatggccacggagcagccccagactctggccacgtattcagtg
tcagatgctgtcgccacttactatctatacatgaagtatgtccatcccttcatattcgcc
ctttgcaccattattcccatggaacctgatgaggtgcttcgaaaaggctctggcacacta
tgtgaggccttgctgatggtgcaggccttccatgccaacatcatcttccccaacaagcaa
gaacaggagttcaacaagctgacagaggatggccatgtactggatgctgagacctatgtt
gggggccatgtggaagctctggagtctggtgtctttcgcagtgacatcccctgtcggttt
aggatgaatcctgctgcctttgacttcctgctgcagcgagttgaaaagaccatgcgtcat
gccattgaggaagaggagaaggtgccggtggagcaagccaccaactttgatgaggtgtgt
gaacaaattaagaccaagctcacttctctgaaggatgttcctaaccgaattgagtgtccc
cttatctaccacctggatgtgggggctatgtaccccaacattatccttacaaaccgccta
cagccctctgccatggtggatgaggccacctgtgcagcctgtgacttcaataagcctgga
gcaaactgccagaggaagatggcctggcagtggaggggcgagttcatgcctgctagtcgc
agtgaataccatcggatccaacaccaactggagtcagagaagttccctgccctgttccca
gatgggccaacccgggcctttcatgagctgtcccgtgaggaacaggctaagtatgaaaag
cggagactggcagattactgccggaaggcttacaagaaggtccatgtcaccaaggtggag
gagcgcttcactaccatctgccagcgggagaattccttctacgtggacacagtgcgggct
ttccgggacaggcgctatgagttcaaagggctacacaaggtgtggaaaaagaagctctcg
gcagcagtggaagcaggcgatgcagctgaggtgaagcgttgcaagaatatggagatcctg
tatgattcactgcagctagctcacaagtgcatcctgaactccttctatggctacgtcatg
cgcaagggggctcgctggtactccatggagatggctggcattgtctgcttcacgggggcc
aacatcattacccaggcccgggagctgattgaacagattgggaggcccttagaactggac
acagatggaatatggtgtgttctgcccaatagctttccagaaaattttgttatcaagaca
accaacacaaagaagcccaaggtgaccatctcctaccctggagccatgttgaacatcatg
gtcaaggaaggcttcaccaatgaccagtaccaggaactggcagagccttcctcactcacc
tatatcacacgttcagagaacagcatcttttttgaggttgatggaccctatcttgccatg
atcctgccggcctccaaggaagaaggaaagaaattgaagaagagatatgctgtattcaat
gaggatggatccttggctgagctaaaaggctttgaggtcaaacgccgtggggagctgcag
ctaattaaaattttccagtcttctgtgtttgaggccttcctcaaaggtagtactctagaa
gaggtgtatggctctgtagccaaggtggctgactactggctagacgtgctgtacagtaag
gcagctaacatgcctgattccgagctgtttgagctgatctcagaaaaccgctccatgtct
cggaagctagaagattatggggaacaaaagtccacatccatcagcacagcaaagcgcctg
gctgagtttcttggagaccagatggtcaaagatgcagggctgagctgtcgctatatcatc
tcccgcaaacctgagggctcccctgttactgagagagccatcccacttgccattttccaa
gcagagcccacagtgaggaaacacttccttcgaaaatggctaaagagctcatcccttcaa
gattttgatatacggacaattctagactgggattactacattgaaagactggggagtgcc
atccagaagatcatcaccatccctgcagctctgcagcaggtgagaaacccagtaccgcgc
gtcaagcacccagactggctgcacagaaaactactggagaagaacgatgtctacaagcag
aagaaaatcagtgacctctttgtccttgagggcaggagacagattgtgacggcccaaatt
cctgaaggcagcccaaggccaagtgctcccgacatggaggactttggtctcacaaagcaa
atccactcagcagttccagttgcgactaagaggaagcgagttctttgggagagccaacag
gattctcaggaccttgagctgacggttccctggaaggagatcctgggtcagcctcctatc
ctcggaacaactcaggaagagtggctggtctggcttgggttccacaagaagaaatggcag
ctacaggcccagcaacgtgtggtccggaggaagagacagcgtcgggaactgaccgagggt
gcaccaaggcctggaaccgtccgagaggggcctgtcacaggtttggggagcttcctaaga
aaaactgctcgcagcatcctggaccttccgtggcagattgtgcagatcagtgagaccaac
caggctggcctgttcagactatgggccatcatcggcagtgacttgcactgcatcaagctt
agcatccctcgagtattctacgtgaaccagagggtggccaaagtggaggagggaccttca
tatcgcaaggtaaatcgggctctccctcgttcgaacatggtctacaatctgtatgagtat
tcagtaccggaagatatgtaccaagaacacatcaacgagatcaacacggaattgtccgca
ccagacatcgagggcgtgtatgagactcaggtcccattgttgttccgagctcttgtgcag
ctgggctgtgtgtgtgtggtcaacaaacagctggtgaggcacctttcaggctgggaagct
gaaacttttgcccttgaacacctggagatgcgttctctggctcaattcagctacctggaa
ccagggagtatccgccacatcaacttgtaccaccacgcacagggccacaaagcccttttc
ggaatcttcatcccctcacagcgcagagcatctgtgtttgtgttggacactgtacgtagc
aaccagatgcccagcctcagtgctttgtactcagcagagcacagccaacttctagaaaag
atgggacctgaactcctgcctccccccaaacatacctttgaagttcgggctgaaaccagc
ctgaagaccatctgcagagccattcagcgcttcttgctggcctacaaggaggaacgccgg
gggcccacactcattgctgtccactccaactgggagctgcgaaggctggccagtgaggtc
cctgtcttggaggagttcccattagtgcctgtccgagtggccgaaaagatcagctatgga
gtcctggactggcagcgccatggagcccgccgcatgatccagcactacctcaaccttgac
acctgcctgtcacaggcctttgagatgagtaggtacttccacatccccattggaaatctg
ccagaagacatttccacctttggctctgacctcttctttgcacggcacctgcagcgccac
aaccacctgctctggctgtcccctacttcccgtcctgacctgggagggaaggaggcagat
gacagccgcctggtcatggaatttgatgaccgagccactgtagagatcaacaattctggc
tgttactccactgtgtgtgtggagctggacatacaaaacctggcagtcaacaccatcctc
cagtctcaccacatcaatgatatggaaggggctggcagcatgggcatcagctttgacgtg
atccaacaggcctctctggaagacatggtcacaggaaatcaggcctccagtgctccagcc
agctacgatgagaccgccctctgctccagtgccttcaggatcctaaagagcatggtggtc
ggctgggtgagggagatcacccagtaccacaacatctatgccgacaaccaggtgatgcac
ttctaccgctggctccggtcgccatgctccctgctgcacgaccctgccctgcaccgaacg
ctgcacagcatgatgaagaagctcttcctgcagcttgttgctgaattcaagcgcctgggg
tcatcagtcatctatgccaattttaaccgcatcatcctttgtacaaagaagcgccggatt
gaggacgccattgcctatgtagagtacattaccaatagcatccattctaaagagatcttc
cactccctgacgatttctttctcccgatgctgggaatttcttctctggatggatccatct
aactatggtggaatcaaagggaaagttccaagtagtattcactgtggacagcaagactcc
cagattggggaaggagctaaggataagcaggaggatgaggaggaagaggaagaggaagag
gaagaggagggggtggaagaatccgaggtggaagacttactggaaagcaactggaatatt
ttgcagtttttgccacaggctgcgtcctgccaaagttacttcctcatgattatctcagca
tatatcgtggctgtgtaccacagcatgaaggatgagctgaggcgtagtgccccaggcagc
acccctgtgaggaggaggggggccagccaattctcccaggagcccgaggtggcagcggga
gcccttcctggaatgatcactttctctcaagattatgtggcaaacgagctcactcacagc
ttcttcaccatcactcagaagattcaaaagaaaatcacaggctctcggaactcaactgag
ccctcagagatgtttcctgtcctgcctggttcacacttgctgctcaataaccctgctctg
gagttcatcaaatatgtctgcaaggtactgtctttggacacaaacatcacaaaccaggtg
aacaagctgagcagagacttgcttcgcttggtggacgttggcgagttctccgaggaagcg
cagttcagagacccttgccgctcctacgtgctccccgaggtgatctgccacaactgtaat
ttctgccgggacctggacctgtgcaaagacgcctccttctctcaggatggaaccgttctt
cctcagtggttctgctccaactgtcaggctgcctacgactcagctgccattgagtcagcc
ctggtagaagctctgcagaggaagctgatggccttcactctgcaggaccttatctgcctg
aagtgtcgtggtgtgaaggagacccatatgcctgagtactgcagctgtgcaggagacttc
gccctcaccatccacactcagatcttcatggaacaaattggaatcttccagaacattgcc
cagcactatggcatgttatacctccaggagaccctggagtggctactgcatacaggtcct
ctgtccagctcttag

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