Dipodomys merriami (Merriam's kangaroo rat): 138822233
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Entry
138822233 CDS
T11079
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04015
Rap1 signaling pathway
dmer04510
Focal adhesion
dmer04722
Neurotrophin signaling pathway
dmer04910
Insulin signaling pathway
dmer05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
138822233 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138822233 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
138822233 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
138822233 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
138822233 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
CMD
Motif
Other DBs
NCBI-GeneID:
138822233
NCBI-ProteinID:
XP_069870980
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MSGGLGLRRSPEMSGKVEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPTEGSVKI
PEKPGNKEARDRFLPEGYPVPLDLEQQTVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKETVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
PAGKPDSQPELPLTDREMEILNKATSASTSTELLPDSADEEAAPPKPPLPGIRVVDNSPP
ALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSRSCGGE
SPRLSPCSSTGKLSRSDEQLSSLDRDSGQGSRNTSCETLDHYDPDYEFLQQDLSDADQIP
QQAACHLSPLPESLGESGSPFLGHPFQLPLGGCPQPEVPLAPGQQMDTPPALPEKKRRSA
ASQGPDGSGSRTPYERHPSQYDNLSEDDLQSQTPGPPGPYPPFAAVLPFQPAGFTAPESA
GDPEKPPPLPEKKNKNMLAYMQLLEDYSEPQPSVFYQTPQSEHIYQQKNKMLMEVYGFSD
SFGAGDAAQELAPPPALPPKQRQLASFAASSFSSVSYCVQQTKVAFTPEDGSATQGLSVS
VSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVQPFLPPTSSSSPHFPPVHLSPSSD
SAEPAVARPPPGTTDGPLSSSQESSCHGPVCLSSETSFTDSSANASAEAGEGDYVSLCSS
GQSSEERGPPRGETPAGKDGHPRDPSAVSTPGKDSRDGGERASKSPDALESQSEEEVDEL
SLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFIS
PEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFR
LVSSGELSLARVLRKNILDKVDQKKLLRCAHSDQPLAARGVAARPGTLHDFHSHEIAEQL
TLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRER
LLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQRQTSEGLAEYCTLIDSSSSFR
AYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDFIDGKVNFSKRWQQFNILDSMRCFQQA
HYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcctcggcctccggcgcagcccggaaatgtccggcaaggtggagaaagca
gactcgcagcgttcacacctctcctccttcaccatgaagctgatggacaaattccactct
cccaaaatcaagagaacgccgtccaagaagggaaagcccactgaggggtcggtgaagatt
ccagagaaacctgggaataaagaggcaagagacagatttctaccagagggctaccctgtc
cccttggatctggagcagcagacagtagaatttatgtccaccagtgctgtggcttccagg
tctcagaggcagaagaacctgagctggctggaagagaaagagaaggaagttgtcagtgcc
ttgcgctactttaagacaattgtggacaaaatggctattgataagaaggtactggagatg
cttccagggtccgccagcaaggtgctggaggccatcttacccttggtgcagaccgacccc
cggatccagcacagctcagccctctcctcctgctatagccgggtgtaccaaagtcttgcc
aacctcatccgttggtctgaccaggtgatgcttgaaggggtgaactcagaggataaggag
acagtgacaacggtgaagggcgtcatcaaggccgtgctggacggagtgaaggagctggtc
aggctgaccatcgagaagcagggacggccgtctccaaccagccctgtgaagcccagctcc
ccagccggcaagcctgacagtcagcccgaactccccctgacagaccgagaaatggagatt
ctaaacaaggcaacaagtgcatcgacctccacagagctactcccagactcagccgacgaa
gaggccgcgccccctaagccccccttgcctggcatccgggtggttgataatagtccccca
gcattgccacctaagaaaagacagtccgctccatcccctacccgagtagccgtggtggcc
cccatgagccgggccaccagtggctccagcttgcccgtgggaatcaacagacaggatttc
gacgtggactgttacgcacagaggcgcctgtccggaggcagccggtcgtgtggcggcgag
tcgccccgcctgtccccctgcagcagcacgggcaagctcagccgatcggacgagcagctc
tcctccctggacagggacagcgggcagggctcccggaacacaagctgtgaaacgctagat
cactatgatcctgactacgaattcctccagcaagacctctccgacgcggaccagatacct
cagcaagcagcctgtcaccttagcccgctgccagagtccttgggggagtcggggtctccg
tttcttggccaccctttccagctgcccctgggcggctgtccccagcctgaggtgcccttg
gccccagggcagcagatggacaccccacccgcccttcccgagaagaagcgccgcagcgcc
gcctcgcagggcccggacggctccggcagcaggacgccctacgagcggcacccctcgcag
tacgacaacctctccgaggatgacctgcagagccagacccccggcccgcccggcccctac
ccgcccttcgccgccgtcctccccttccagcccgcgggcttcactgctccagaatcagca
ggtgaccccgagaagccaccacctctaccagagaagaaaaacaaaaacatgctggcctac
atgcagctgctagaggactactcagagccgcagccgtccgtgttctaccagacgccgcag
agcgagcacatctaccagcagaagaacaagatgctcatggaggtctacggcttcagcgac
tcctttggcgccggggacgctgcccaggagctggccccgccacccgccctcccccccaag
cagcggcagctggcctcctttgctgcttcttccttctcctctgtctcctactgtgtccag
caaactaaagtggccttcacccccgaggacggcagtgccactcagggcctcagtgtgtcc
gtgtctaactcctttctcagccggcacggcagcttgcctgtgccctcgtacaaatctgtg
tttaggtcctactcacaggacttcgtgcctcaccaccaagcttccgtccaacctttcctt
ccgcctacctcctcctcctctccacacttcccacctgtccacctgtctccgagctcggac
tcggcagagcccgccgtagccaggccgcctcccggcaccacggacgggcctctctcatct
tctcaggagagcagctgccatggccctgtctgcctttcttccgaaacctctttcactgac
tcgagtgcaaacgccagtgcggaagctggcgagggggactatgtcagtctgtgttcctct
ggccagagcagcgaggagcggggtccccctcgaggagagaccccagctgggaaagacgga
catcccagagacccctcagcggtcagcacgcctggaaaggacagcagagatggcggggag
agggcctcaaagtccccggatgctctggagtctcagtcagaagaggaagtggacgagcta
tcgctcattgaccacaatgagattatggccaggctgacactcaagcaagagggtgacgac
gggcccgatgtgcgcggggggtcgggggacatcttgctggtccacgccaccgagacagac
agaaaagatctggtgctgtactgcgaagccttcctgaccacctaccgcaccttcatcagc
cccgaggagctcatcaagaagctgcagtaccgctacgagaagttctccccttttgcggac
acgttcaagaagcgcgtcagcaagaacacgttcttcgtgctggtgcgggtggtggacgag
ctctgcctggtggagctgacggaggagatcctaaagctgctcatggagttggtcttccgc
ctggtgagcagtggggagctcagcctggcccgagtgctgcgcaagaacattctggacaag
gtggaccagaagaagctgctcaggtgcgcccactccgaccagcccctggcagccaggggt
gtggcagccaggccagggaccttgcatgacttccacagccatgaaatcgccgagcagttg
accctgctggacgccgagctcttctataagatcgagattccagaggttttactttgggcc
aaagaacagaatgaggagaagagccccaacctgacccagttcacagagcacttcaacaat
atgtcctactgggtccgctccattatcatgctgcaggagaaggcccaggaccgggagcga
ctgctcctgaagttcatcaagatcatgaagcacctgcggaagctgaacaacttcaactcc
tacctagccatcctctctgcgctggactcggcgcccatccgcagactggagtggcagagg
cagacctcagagggcctggctgagtactgcaccctgatcgacagctcgtcctccttccgg
gcctaccgggccgcactctcggaggtggagcccccatgcatcccctacctgggtctgatc
ctccaggacctgacctttgtccacctggggaacccggacttcatcgatggcaaggtcaac
ttctccaagcggtggcagcagttcaacatcctggacagcatgcggtgcttccagcaggcg
cattacgacattcgcagaaacgatgacatcatcaacttcttcaatgacttcagcgatcac
ctggcggaggaggccctgtgggaactctcactgaagattaagcccaggaacatcacgagg
aggaaaacagaccgagaggagaagacctag
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