Dipodomys merriami (Merriam's kangaroo rat): 138822460
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Entry
138822460 CDS
T11079
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138822460 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138822460 (Trip12)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138822460 (Trip12)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
HECT type E3
138822460 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
Motif
Other DBs
NCBI-GeneID:
138822460
NCBI-ProteinID:
XP_069871348
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSGRQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHIESPSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS
GASGSSRSQKRKRTESSCLKSGSGFESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTIPPGARVKQGKDQSKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGAMLGIESRVSHMLGSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKS
VVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAE
QALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFV
ADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTP
PILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRS
PQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDS
RIIEVAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYS
ELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAE
LLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKH
LAESESLLTSPPKACTNGSGSLGSTTSVSSGTATAATNAAADLGSPSLQHSRDDSLDLSP
QGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGR
LSAQSNSNNIEPARTAGVSGLARAASKDTLSNNREKIKGWIKEQAHKFVERYFSSENMDG
SNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLT
SKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPMGNAPLLALVHKMNNCLSQMEQF
PVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPL
ALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHL
LPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCV
GGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVI
LLLRVLHAVSRYWYYLYDNAMCKEIIPTSEFNNSKLTAKANRQLQDPLVIMTGNIPTWLT
ELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRT
VNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRG
EEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFR
LVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKES
LQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNE
GVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHD
SRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDF
LPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcaggaaggcaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcgaaaaaacccaaagcacttcagcatatt
gagtctccctcagaaacaaataagccacatagtaagtcaaagaagagacatttagaccag
gaacaacaactgaaatctgcacaatcaccatcaacaagcaaggctcacaccagaaagagt
ggggcctctggtagttcacggagtcagaaaagaaagaggacagagagttcttgtctaaag
agtggctctgggttcgaatcaactggtgccgaagagagatctgcaaaacctaccaagctg
gcttcaaaatctgccacctcagccaaagctgggtgtagcaccatcactgattcttcctct
gctgcctcaacttcctcatcatcttctgctgtagcctcagcctcttccaccatacctcca
ggtgccagggtgaagcaaggaaaagaccagagcaaggccagacgttcccgttcagcatcc
agtcctagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaag
ttagcaagtttaagaaaatctaccaagaagcgcagtgagtcaccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggctcgtcggcaggagaaaatggcagac
cctgaaagcaatcaggagacagtgaattcttcagctgccagaacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgactacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattgga
agcggagctatgctggggattgaatccagggtctcgcacatgctaggttcaaaggcccag
cagcttctgcaaggactacaagccagtgatgaaagtcagcagcttcaagcagtcattgaa
atgtgtcagctattagtcatgggaaatgaggagacgctaggaggttttccggtcaagagt
gttgttccagctttgataacattactgcaaatggagcataattttgatattatgaaccat
gcctgccgagctttaacatacatgatggaagcacttcctcgatcatctgctgttgtagta
gatgctattccagtctttttagaaaagctgcaagttattcagtgcattgatgtggcagag
caggccttaactgccttggagatgttgtcacggagacacagtaaagctattctacaggca
ggtggtttagcagactgtttgctatatcttgaattcttcagcataaatgcccaaagaaat
gcattagcaattgcagccaattgttgccagagtatcacaccagatgaatttcattttgtg
gcagattcccttccattgcttactcaaaggctgacacatcaggacaaaaagtcagttgaa
agcacttgcctttgttttgcacgtctagtagacaactttcaacatgaggagaacttgcta
cagcaggttgcctccaaagatctgcttacaaatgttcaacaactgttagtagtgactcca
cccatcttaagttctgggatgtttataatggttgttcggatgttttctctgatgtgttcc
aactgtccaacattagctgttcaactaatgaagcaaaacattgcagaaacgcttcacttc
ctcctctgtggtgcctccaatggaagttgtcaggagcagattgatcttgttccacgaagt
cctcaagagctatatgaactgacatctttgatttgtgaacttatgccatgtttaccaaaa
gaaggcatttttgcggttgataccatgttgaagaaaggaaatgcacaaaacacagatggt
gcaatctggcagtggcgtgatgatcggggcctctggcatccttacaataggattgacagc
cggatcattgaggtagcagcccatcaggtcggtgaggatgagataagcttgtccactctg
ggacgagtttatactattgattttaattctatgcagcaaatcaatgaggacacggggaca
gcacgtgccattcagagaaaacctaaccccttagccaatactaacactagtggatattca
gagttaaagaaggatgatgctcgagcacagcttatgaaagaggatccggaactggctaag
tcttttatcaagacattgtttggtgttctttatgaagtatatagttcctcagcaggacct
gcggtcagacataagtgccttagagcaattcttaggataatttattttgcggatgccgag
cttctgaaggatgttctaaaaaatcatgctgtttcaagtcacattgcatccatgctatca
agccaagacctgaagatagtagttggagcacttcagatggcagaaatcttaatgcagaag
ttacctgatatttttagtgtttacttcagaagagaaggtgtaatgcatcaagtaaaacat
ttagcagagtcagagtctttgttgacgagtccaccaaaggcatgtacgaatgggtcagga
tccttggggtctaccacgtccgtgagcagtgggacagccacagccgccaccaatgctgca
gctgatctgggctcacctagcttgcagcacagcagagatgattctttggacctgagtcct
caaggtcgattaagtgatgttctaaagagaaaacgactgccaaaacgagggccacgaagg
ccaaagtactcacctccaagagatgatgacaaagtagacaatcaagctaaaagccccacc
accactcagtcacctaaatcttccttcctggccagcttgaatccaaaaacatggggaagg
ttaagcgcacagtccaatagcaacaacattgagccagcacgaactgcaggagttagtggt
cttgccagggctgcctcaaaggacactctatccaataacagagaaaaaattaaaggttgg
attaaggagcaggcacataaatttgtagagcgctattttagttctgagaatatggatgga
agcaatcctgcactgaatgtccttcagagactttgtgctgcaactgaacaactcaacctc
caggtggatggtggagctgagtgccttgtagaaatccgtagcatagtctcagaatcagat
gtttcatcatttgaaatccagcatagtggatttgtgaagcagctgttgctttatttgaca
tctaaaagtgaaaaggatgccgtaagcagagagatcagattaaagcgatttcttcatgta
tttttttcttctcctcttccaggagaagagcctattggacgagtagaaccaatgggtaat
gcacctttattggcattagttcacaagatgaacaactgcctgagccaaatggaacagttt
ccagtcaaagtgcatgatttccccagtggaaatgggacaggaggaagcttttctctcaac
agaggatcacaggctttaaaatttttcaacacacatcagttaaaatgccaattacaaaga
catcctgattgtgcaaatgtgaaacagtggaagggtggacctgtcaagatcgacccattg
gcgttggtacaagctattgagagataccttgtagttagagggtatggaagagtaagagaa
gatgatgaagacagtgatgatgatggatcagatgaggaaatagacgaatctctggctgct
cagtttttaaattcaggaaatgtgagacacagactacagttttatattggagaacatttg
ctaccatacaatatgactgtgtatcaggcagtacgacagttcagtgtacaggctgaagat
gaaagagaatccacagatgatgaaagcaatcctctagggagagctgggatttggacaaag
actcataccatatggtacaaacctgtaagagaggatgaagaaagtaataaagattgtgtt
ggtggtaaaagaggaagagcccaaacagcgccaacaaaaacgtcccccagaaatgcaaaa
aagcatgatgagttatggcatgatggagtgtgcccatcagtatcaaatcctttagaagtt
taccttattcccacgccacctgaaaatatcacctttgaagacccatcattagatgtgatc
ctccttttaagagttttacatgctgtcagtcgatactggtattacttgtatgataatgca
atgtgcaaggagattattccaactagtgaatttaataacagtaaattgacagcaaaagca
aacaggcagcttcaagatcctttagtaatcatgacaggaaacatcccaacatggcttact
gagctaggaaaaacctgcccatttttctttccttttgatacccggcaaatgcttttttat
gtaactgcatttgatcgagaccgggcaatgcaaagattacttgataccaacccagaaatc
aaccagtctgattctcaagatagcagagttgcacctagattggatagaaaaaaacgtact
gtgaacagagaggagttgttgaagcaagccgaatctgtaatgcaggaccttggcagttca
cgggccatgttagaaatccagtatgaaaatgaggttggtacaggtcttgggcctacactg
gagttttatgcacttgtatctcaggaactacagagagctgacttgggtctctggagaggt
gaagaagtaactcttagcaatccaaaaggaagccaagaagggaccaagtatattcaaaac
ctccagggcctgtttgcgcttccttttggtaggacagctaagccagctcatatcgcaaag
gttaagatgaagtttcgcttcttaggaaaattaatggctaaggctatcatggatttcaga
ttggtggaccttccccttggcttacccttttataagtggatgctacggcaagaaacttca
ctgacatcacatgatttatttgacatcgaccctgttgtagccagatcagtatatcacctg
gaagacattgtcagacagaagaaaagactggaacaagataaatctcagaccaaagagagt
ctacagtatgcattggaaacacttactatgaatggctgctcagttgaagatctaggattg
gatttcacgctgccagggtttcccaacattgaactaaagaaaggagggaaagatatacca
gtcactatccataatttagaagagtacctaagactggttatattctgggcactcaatgaa
ggtgtttctaggcaatttgattcatttcgagatggatttgaatccgttttcccactcagt
catcttcagtacttctacccagaggagctggatcagctcctctgtggcagtaaagcagac
acttgggatgcgaagacgttgatggagtgctgcaggcctgatcatggctacactcatgac
agtcgggcggtgaagttcttgtttgaaattctcagtagttttgataatgagcagcagagg
ttatttctccagtttgtgactggtagcccacgattgcctgttggaggatttcggagtctg
aatccacctttgactattgtccggaagacatttgaatcaacagaaaacccagatgatttc
ttaccttctgtaatgacttgtgtgaactatcttaagttgccggactactcaagcattgaa
ataatgcgtgacaaactgttgatagcagcgagagaagggcagcagtcattccatctttcc
tga
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integrated database retrieval system
