KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138822745
Entry
138822745         CDS       T11079                                 
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04151  PI3K-Akt signaling pathway
dmer04382  Cornified envelope formation
dmer04510  Focal adhesion
dmer04512  ECM-receptor interaction
dmer04820  Cytoskeleton in muscle cells
dmer04926  Relaxin signaling pathway
dmer04933  AGE-RAGE signaling pathway in diabetic complications
dmer04974  Protein digestion and absorption
dmer05146  Amoebiasis
dmer05165  Human papillomavirus infection
dmer05200  Pathways in cancer
dmer05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    138822745 (Col4a3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    138822745 (Col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138822745 (Col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    138822745 (Col4a3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    138822745 (Col4a3)
  09154 Digestive system
   04974 Protein digestion and absorption
    138822745 (Col4a3)
  09158 Development and regeneration
   04382 Cornified envelope formation
    138822745 (Col4a3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    138822745 (Col4a3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    138822745 (Col4a3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    138822745 (Col4a3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    138822745 (Col4a3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    138822745 (Col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dmer04147]
    138822745 (Col4a3)
   00536 Glycosaminoglycan binding proteins [BR:dmer00536]
    138822745 (Col4a3)
Exosome [BR:dmer04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   138822745 (Col4a3)
Glycosaminoglycan binding proteins [BR:dmer00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138822745 (Col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 138822745
NCBI-ProteinID: XP_069871785
LinkDB
Position
Unknown
AA seq 1671 aa
MRPAAAAAPRPSVGLALLLLLLAAPPVASKGCVCKDKGQCFCDGTKGEKGEKGFPGPPGF
PGQKGFPGPEGSPGPRGPKGSPGLPGLTGPKGVRGISRLPGYSGPPGLPGIPGNSGPYGL
PGLPGCNGSKGDQGFPGIPGTPGYPGVQGATGLKGQKGAPAQREDGEINGKGDPGVPGPP
GFQGLPGPPGFPGPPGPPGPPGIFGFPGAPGPRGPKGYMGDNVVGQKGERGIKGLTGPPG
PPGTVIVTLTGPENRTDLKGEKGDKGATGEPGPPGPPGLPGESYGSEKGAPGEPGAQGKP
GKDGAPGFPGTEGAKGHRGFPGLRGEVGLKGWKGDPGPPGFRGPTEYYDTYWQKGDAGIP
GPPGPKGVRGLPGPSGPPGVPGSPGSSKPGPSGAPGWPGLKGSKGKTGPPGKDMVGLPGS
PGCPGTPGPPGSPGPPGPPGDVIFRKGPPGDRGPPGHPGSPGIPGVDGPKGEAGLVCTQC
SYIPGPPGLPGLPGFDGLKGIPGGQGPAGAKGSPGSPGSAGPPGFPGFPGALGAPGLKGE
KGETPQPQGQMGVPGEPGPRGPPGRKGLDGIPGSPGLKGSPGPKGDPALSGEKGDRGPPG
NPGSPGPPGPEGPAGPPGCGPQGEPGPKGTQGVPGAPGLPGKAGPKGEPSVSLPVPGPPG
PPGPPGRVGPRGPPGLPGSMGRCDPGLPGPEGEPGIPGIGLPGPPGPKGDRGLLGAKGPP
GYPGKMGEPGFPGDPGFPGAKGEPALPRPGEPGKPGFPGERGNSGENGEIGLPGLPGVPG
LPGKDGLDGPRGDPGRAGPPGEKGPPGKCLEGPRGVPGLPGLNGLQGQPGRRGEPGPKGD
PGIPGLDRSGAPGEPGPPGVPGHQGEMGPPGQKGRPGAPGPSGLPGERGTVGMMGYPGTI
GLPGPPGEPGSPGQKGSLGTPGMKGTRGPPGAKGEQGEKGIPGPSRITQLKGDKGEPGLK
GFTGNPGEKGNRGTPGLPGLQGLPGPSGPPGPPGPRGDLGRTGNPGEAGPPGMAGGMGNM
GVPGSKGKQGTRGLPGLAGRPGLPGVPGLQGEKGEPGYSEGARPGPPGPTGDPGLPGDMG
KKGERGSPGPPGQAGPVGPEGAPGSPGVPGHPGKRGPDGQLGNKGVKGFRGPPGIKGPPG
LPGLPGSPGPVGMRGNQGRDGIPGPAGEKGETGLLGAYPGPRGNPGAQGAKGNKGAPGWP
GLPGQKGTMGDTGPRGPMGILGFPGPPGLPGAIIPGRKGNRGPPGSRGNPGEPGPPGPPG
SHIKGIKGDKGLMGQPGPKGLPGAVGDMGPPGHPGAPGDPGLPGPRGDPGFPGFPGMRGE
KGNPGFPGSIGPPGQVGLKGPPGPRGDPGTIKIISLPGSPGPPGPPGQPGMQGEPGLLGP
PGKPGPCGPKGIPGKDGKPGIPGPVGEKGNKGSKGKQGPPGFDGLPGLKGKPGDMGPPAT
GTTMTGFVFTRHSQTVVPPPCPEGTQPLYSGFSLLFVQGNERAHGQDLGTLGSCLQRFTP
MPFLFCNINNVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAVAIA
VHSQTTTIPPCPHGWISLWKGFSFLMFTSAGSEGAGQELASPGSCLEEFRASPFLECHGR
GTCNYYSNSYSFWLASLDPERMFRKPTPSTVKAGELERIISRCQVCMKKRH
NT seq 5016 nt   +upstreamnt  +downstreamnt
atgcgccccgcggcggcggcggcgccccggccgtccgtcgggctggcgctcctgctgctg
ctcctggcggccccgcccgtggcgagcaagggctgtgtctgcaaagataaaggccagtgc
ttctgtgatgggaccaaaggagagaagggggagaaaggctttcctggaccccctggtttt
cctggacagaaaggattcccaggccctgaaggctcaccaggaccccggggacccaagggc
tctccaggacttccaggactcactggtcccaaaggtgtcaggggaataagcagattgcca
gggtattcaggcccacctggacttccaggcattcctggcaattcagggccatacggactt
cctggtttaccaggatgcaatggttccaagggtgaccaagggttccctggcattccgggg
acaccaggctacccaggggtccagggtgctactggtttgaaaggacaaaagggtgctcct
gctcaaagagaagatggagaaatcaatggaaaaggagatccaggggtgcctggccctcca
ggattccagggtttgccaggccctcctggatttccaggacctcctggcccaccaggacct
cccggaatctttggctttccaggagctcctggaccaagaggacctaagggttatatgggt
gataacgtggttggacagaaaggagagcggggtataaaaggattaacaggaccccctgga
ccaccaggaactgttattgtgacactcaccggcccagaaaacagaacggacctcaagggg
gagaaaggagacaaaggagctactggtgaacccggacctcctggacccccaggactgcct
ggagaatcctatggatctgaaaaaggtgctcctggagaacctggtgctcaggggaaacct
gggaaagatggtgctcctggcttccctggcactgagggagccaagggccacagaggcttc
cctgggttaaggggtgaagttggacttaagggatggaaaggagacccaggccctccagga
tttcgtggtccaacagaatattatgacacttactggcaaaagggagatgcaggaattcca
gggcccccagggcccaaaggagttcgtggcctaccaggtcccagtggcccccctggagtt
cctggaagtcctggatcatcaaagcctggccccagtggagcccctggatggccaggctta
aaaggaagtaaagggaagacaggacccccgggaaaggacatggtggggcttcccgggtct
ccaggctgtcctgggacaccagggcccccaggatcaccaggacctccaggacctccaggt
gatgtcatttttcgcaaaggtccacctggtgaccgtggaccgccaggccatccggggtcc
cccggcatcccaggagtcgatggccccaaaggagaagcaggccttgtgtgcacacagtgt
tcttatatcccagggccccctggtcttccaggattgccagggtttgatggtctcaaaggc
atcccaggaggacaaggtccggctggtgctaaaggaagcccagggtccccagggagtgca
ggtcccccaggatttccgggatttccaggtgccctgggtgctccaggacttaaaggagaa
aaaggtgaaacacctcagccccaggggcaaatgggagtccctggggagcctgggcccaga
ggaccaccaggaagaaagggcttggatggaattcctggatctccaggattaaaaggatca
ccaggacctaagggcgacccggccctgagtggagagaagggggaccgcggtcctccaggg
aatcctgggtcccctgggcctccagggcctgaaggaccagcaggaccacctggctgtgga
ccccagggagagccaggtccaaagggcacccaaggagttcctggagccccaggactgcct
ggaaaagccggtcctaagggagaacccagtgtttcactcccagtcccaggccccccagga
cctccagggccccctggccgtgtgggccctcgaggcccccctggtctccctggctccatg
ggaagatgtgatcctggtctccctggacctgaaggggaaccaggaatcccaggaatcgga
cttcctggacctccaggaccaaaaggagatcgaggcttgctaggagctaaaggaccccca
ggttaccctgggaaaatgggagagcctgggtttcctggagatccaggcttcccaggagcc
aagggggaaccagctctacccaggcctggagaaccaggaaaaccaggttttccaggagaa
agaggcaattctggggaaaatggagaaattggactccctggacttcccggcgtccctgga
cttccaggaaaagatgggctggatggacctcgaggagatccagggcgggccggaccacct
ggagaaaaaggacccccaggaaagtgcttagagggacccaggggcgttccaggccttccc
ggcttaaatggactgcaaggacagccaggtcgaagaggtgaaccaggaccaaaaggagac
ccgggcattccgggcttggataggtcaggagccccgggagaacctggacctcccggagtg
ccaggtcaccagggggagatgggaccaccaggccagaaaggacgtccaggtgccccagga
ccttcaggactcccaggtgaaagaggcacagttgggatgatgggctatcctgggaccatc
ggccttcctgggcctcctggggagccaggctcaccggggcaaaagggcagccttggaact
ccaggaatgaaaggcacaagaggacccccaggagccaaaggggaacaaggagaaaaagga
atccctgggccctctcgcataacccagttaaagggcgacaaaggagaaccaggcctcaaa
ggatttacaggaaatccaggtgagaaaggaaacagaggcactccaggcttgccaggctta
cagggtctcccaggaccctctggaccaccaggaccaccaggcccgagaggagatttgggg
agaactgggaatcctggagaagcaggaccacctggcatggctggcggcatggggaacatg
ggtgtaccaggttctaaaggaaaacaaggaaccagaggactcccgggtctagctggaaga
cctggcctccctggggttcctgggctccaaggagaaaagggagagccaggctattcggaa
ggagcaaggccaggcccgccaggaccaacgggagatcctggactgccaggtgacatggga
aagaaaggagaaagagggtcacctggcccacctggacaggcggggcctgttggacctgag
ggagcccctgggagtcctggagttcctggccacccaggaaagcgaggccctgatggccaa
ttggggaacaaaggagtcaaaggcttccggggtcccccaggaatcaaaggccctccagga
cttcctgggttgccaggatctcctggaccagtggggatgagaggtaaccagggacgtgat
ggaattcctggtccagctggggaaaagggagaaacaggattgttgggggcctatccaggc
ccaagagggaatcctggtgcccagggtgccaaaggaaacaagggggctcctggctggcct
ggcctcccaggacagaaggggaccatgggagacaccgggcctcgaggacccatgggcatc
ctaggattccccgggccacctggtctacctggggcaattatccctggtcgaaaaggaaat
cgagggccaccaggttcaagaggaaatccaggtgagccaggtccccccggacctcctgga
agccacatcaagggcataaaaggtgacaaagggttgatgggccaacctggccccaaaggt
ctacctggggctgtaggagacatggggccaccaggtcatccgggagcaccaggtgacccg
ggtctcccagggccgagaggcgatcctggatttcctgggtttccaggcatgagaggtgag
aagggcaatccgggatttccaggatcaattggacctccaggacaagttgggctgaaagga
ccacctggtccacgtggagaccctggcacaattaagatcatctcccttccgggaagccca
gggcctcctggtccacctggacaaccaggaatgcaaggagaacccgggctgttggggcca
cccggaaaaccaggaccatgtggaccaaaaggtatacctggcaaagatggaaaaccagga
attcctggaccagttggagaaaagggcaacaaaggttctaaaggaaagcaaggtccacct
ggattcgatggattgccaggactgaagggaaaaccgggagacatgggaccacctgcaacg
gggactacaatgacaggctttgtcttcacccggcacagtcagacggtggtgccgcctcca
tgtccagaaggaacacagccactctacagcggcttttcccttctctttgtacaagggaac
gaacgagcccatggacaagaccttggaactcttggcagttgcctgcagagatttacccca
atgccgttcttattctgtaacatcaataatgtatgcaattttgcatctcgaaatgattat
tcatattggctgtcaacacccgctctgatgccaatggatatggctccaatcactggcagg
gccctagagccttatatcagcagatgcactgtctgtgaaggtcccgcggtagccatagcc
gttcacagccaaaccaccaccattccgccatgccctcatggctggatttctctctggaag
ggattttctttcctcatgttcacaagtgcaggctctgagggcgccgggcaagagctagcg
tctcctgggtcctgcttggaggaattccgagccagtccatttctagaatgccatggaaga
ggaacatgcaactactattccaattcctacagtttctggctggcttcattagacccagaa
agaatgttcagaaaacctactccatcaactgtgaaagctggggaattagaaagaataata
agccgctgtcaggtttgcatgaagaaaagacactga

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