Dipodomys merriami (Merriam's kangaroo rat): 138823135
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Entry
138823135 CDS
T11079
Symbol
Farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138823135 (Farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmer01007
]
138823135 (Farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmer03016
]
138823135 (Farsb)
Enzymes [BR:
dmer01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
138823135 (Farsb)
Amino acid related enzymes [BR:
dmer01007
]
Aminoacyl-tRNA synthetase
Class II (U)
138823135 (Farsb)
Transfer RNA biogenesis [BR:
dmer03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138823135 (Farsb)
Prokaryotic type
138823135 (Farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
138823135
NCBI-ProteinID:
XP_069872181
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAQGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPNGEIQKLIVTEETGKVRPY
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEHTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIINGD
HSKITVNTKNVFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAVEVAFPNRKSSTFP
ELAYRREMVRADLINKRVGIRETPQNLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH
ACDIVEDAAIAYGYNNIQMALPKTYTIANQFPLNKLTELLRVDVAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSSKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRVMQLLNVPPGEDKGGYVIKASEG
PAFFPGRCAEVFARGLSVGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgcgatctgctctttcaagccttgggccggacctacact
gacgaagaatttgatgaactatgttttgaatttggcttggaacttgatgaaattacttct
gagaaggaaataataagtaaggaacaaggtaatgtgaaggcacagggggcctctgatgtc
gttctttacaaaattgatgtccctgccaatagatatgatcttctatgcctagaaggattg
gttcgaggacttcaggtcttcaaagaaaggataaaagctccagtttataagcgggtaatg
ccaaatggagaaatccaaaaattgattgtcacagaagagacaggtaaagtgaggccttac
gccgtagcagcagttctccggaatataaagtttactaaagatcgatatgacagcttcatt
gaacttcaggagaaattacatcagaatatttgcaggaaaagagccctcgttgccattggc
acccatgatttggacactttgtcaggcccgtttacatacactgcaaagcgcccttctgat
atcaaattcaagcctctcaataagacaaaggagcatacagcctgtgaattaatgaacata
tacaagactgataaccaccttaaacattatttacatatcattgaaagtaaaccactgtac
ccagttatttatgacagcaatggggttgtcctttcaatgcctccaatcatcaatggggat
cattccaaaataacagtaaatactaaaaacgtgtttatcgaatgcacaggaactgatttt
actaaggcaaaaatagtccttgatataattgtcaccatgttcagtgaatattgtgaaaat
caatttacggttgaagctgttgaggtagcctttcctaacaggaaatcaagtacctttcct
gaactggcttaccgaagggagatggtgagggctgatttaattaacaaaagagttggaatc
agagaaactccacaaaatcttgccaaacttctgaccaggatgtacttaaagtcggaagtc
ataggtgatggcaatcagattgagattgaaattccacccaccagagccgacattatccat
gcatgtgatattgtagaagatgcagctattgcttatggatataacaatattcagatggct
ctccccaaaacatataccatagctaatcaatttcctctaaacaagttaacagaactcctt
cgggttgatgtggcagctgctggattcactgaagcactcacctttgctttgtgttcccaa
gaagatattgctgataaacttggtttggatatttctgcgacaaaggcagtccacataagt
aatcctaaaacagctgaatttcaggtggcgcgaactaccctccttcctggtctcctgaag
accatagcggcaaataggaagatgccccttcctctgaaactctttgaaatttctgacatt
gtagtgaaagattctagcaaagatgtaggtgcaaaaaactacaggcatctctgtgctgtt
tactacaacaagaatcctgggtttgagataatccatggactgttggacagggtcatgcag
ctgctcaatgtgccccctggtgaagacaagggcggctatgtgattaaagcgtcagagggc
cctgcattctttcctgggcgctgtgctgaggtctttgccaggggtctcagcgtggggaag
cttggggtccttcatcctgatgttatcaccaaatttgagctcaccatgccctgttcctcg
ctggaaatcaatatcgagccgtttttatga
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