Dipodomys merriami (Merriam's kangaroo rat): 138823189
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Entry
138823189 CDS
T11079
Symbol
Obsl1
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138823189 (Obsl1)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
138823189 (Obsl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
Ig_MYOM1
C2-set_2
BiPBP_C
Ig_VEGFR-1-like_5th
Ig_SEMA-3_4_7A
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
138823189
NCBI-ProteinID:
XP_069872338
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MKAGSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPTVVWEKGGQQLAASERLSF
PEDGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEPEPEPRPAEQPR
PPPGTGEGAPVFLTGPRSQWVLRGAEVVLTCQVGGLPEPTLYWEKDGMALDEVWDSSHFA
LEPGRAVGGPGVRLALRIPAARLPDSGVYVCHARNAHGHAQAGALLQVQQPPDSPPDDPD
EPPGPVVEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHWEGRPLLPDRRRLMYRDR
DGGFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIA
VLECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTIRRLIIHRLKADDDGIYLCEMRGRV
RTVANVTVKGPIVKRLPRKLDVLEGENAVLLVETQEAGVEGCWSRDGEELPATCQSSCGH
MHALVLPGVTREDAGEITFSLGNSRTTTLLRVKCIKHNPPGPPVLVEMFKGHQNTVLLTW
KPPEPPPETSFIYRLERQEVGSEDWIQCFSIEKAGAVEVPGDCVPSEGDYRFRVCTVSEH
GRSPHVVFNGSAHLVPTARLVKGLEDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELQSNE
PEGQVEPGALRYRMEQKGLQHRLILQAVKHQDSGALVGFSCPGVQDSAALTIQESPVHIL
SPQDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEENESLVVKRDGHKHRLILPEA
CVQDSGEFECRTEGVSAFFSITVQDPPVHIVDPQEHVFVHAITSECVMLTCEVDREDAPV
CWYKDGQEVEESDFMVLENEGPRHRLVLPTAQPSDGGEFQCVAGEERAYFTVTITDVSSW
IVYPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGAEVVESPALVLQKEDTIRRLVLP
AVQLEDSGEYLCEIDDESASFTVTVTEPPVRIIYPRDEVTLIAVSLECVALVCELSREDA
PVRWYKDGLEVEESEALVLESDGPRRRLVLPAAQPEDGGEFVCDAGDDSAFFTVTVTAPP
ERIVHPTARSLDLQFGAPGRVELRCEVAPAGSRVCWYKDGLEVEASDDLQLGAVGPIRTL
TLPHAQPEDAGEYVCETRNEAVTFNVSLAETPVQFLAPETAPSPLCVAPGEPVVLCCELS
RPSASVSWSHNGKPVQEGQGLKLQAEGPRRTLCILAAEPAHTGLYTCQSGVAPGSPSLSF
TLQVAEPPVRVVAPEAAQTRVRSAPGGDLELVVHLSRPGGPVRWYKDGERLANQGRVQLE
QAGARQVLRVRGARSGDAGEYLCDAPQDSRIFIVSVEEPPPVKLVSELTPLTVHEGDDAT
FRCEVSPPDADVTWLRNGAVVTPGPQLETAQNGSSRTLTIRNCQLEDAGAVTARAGGTTT
SARLHVRETELLFLRRLQDVRAEEGQDVCLEVETGRVGAAGAVRWMRGGEPLPHDSRLSM
AQDGHIHRLFIRGVILADQGTYGCESHHDRTLARLSVRPRQLRALRPLEDVAVNEGGSAT
FQLELSQEGVTGEWARGGVRLQPGPKCQIHTEGHIHHLELSGLGLADGGCISFTADSLRC
AARLSVREVPVTIVRGPQDLEVTEGDTATFECELSRALADITWEKDGGELTPSPRLRLQA
LGTRRLLQLRRCSSSDAGTYSCAVGTIRAGPVRLTVRERTVSVLRELQSVRAREGDGATF
ECMVSEAETPGRWELGGRPLRPGGRVRIRQEGKKHILVLSELRAEDAGEVRFRAGPAQSL
AQLEVEALPLQMCRRPPREKTVLAGRRAVLEVTVSRSGGHVSWLWEGVELCQGDKYEMRC
HGPTHSLVIHDVQPEDQGTYCCQVGEDSANTRLLVEGD
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggctcgggggaccaggggagccccccgtgtttcctgcgcttcccgcggccc
gtgcgggtggtaagtggcgccgaggccgagctcaagtgcgtggtgctgggcgagccgccg
cccaccgtggtgtgggagaaaggcgggcagcagctggcggcctcggagcgcctgagcttc
cccgaggacggcgccgagcacggcctgctgctgagcggcgcgctgcccaccgacgccggc
gtctacgtgtgccgcgcccgcaatgccgccggggaggcctacgccgcggccgccgtcacc
gtgctggagccgccggccccggagcccgagcccgagccccggcccgccgagcagccgcgg
ccgcctccggggaccggggagggcgcgccggtgttcctcacggggccccgctcccagtgg
gtgctgcggggggcggaggtggtgctgacgtgccaggtggggggcctccccgagcccacg
ctgtactgggagaaggacgggatggcgctggacgaggtgtgggacagcagccacttcgcg
ctggagccgggccgcgccgtgggtggcccgggcgtgcgcctggcgctgcgcatcccggcg
gcgcggctgcccgactcgggcgtctacgtgtgccacgcccgcaacgcgcacggccacgcg
caggccggcgcgctgctccaggtgcagcagccccccgacagtccccccgacgaccccgac
gagccgcccggccccgtggtggagccgctcaagtgtgcgcccaagaccttctgggtcaac
gagggcaagcacgccaaattccgctgctacgtgatgggcaagcccgagcccgagatcgaa
tggcactgggagggccgcccgctgctccccgaccgccgccgcctcatgtaccgcgaccgc
gacggcggctttgtgctcaaggtgctctactgccaggccaaggaccgcgggctctacgtc
tgcgccgcccgcaactcggcgggccagacgctcagcgccgtgcagctgcatgtcaaagag
ccccgcctccgattcaccagacccctgcaggatgtggaggggagagagcacgggatcgca
gtgctggagtgtaaagtacccaactccagaatccccacagcctggttccgcgaggaccaa
cgactgctgccctgccgcaagtacgagcagatcgaggagggcactatcaggcgcctcatc
atccacaggctgaaggcagatgatgatggcatctacctgtgtgagatgcggggtcgagtg
cgcacagtggccaacgtgacagtcaaaggccccattgtcaagaggctgccccgcaagctc
gatgtcctggagggagagaatgctgtgttgctggtggagactcaagaggctggggttgag
ggctgctggagccgagatggggaggagctgccggccacttgccagagcagctgtggccac
atgcatgccctggttcttccaggggtgacccgagaagatgctggcgagatcacctttagc
ctgggcaactcccgtaccaccactctgctcagagtcaaatgcatcaagcacaatcctccg
ggcccccctgtgttggttgagatgttcaagggccatcagaacacggtcctgttgacctgg
aaaccgcctgagccaccccctgagacctccttcatctaccggctggagagacaggaagtg
ggctctgaagactggatccagtgcttcagcattgagaaagctggagccgtggaggtgcca
ggggactgcgtgccctccgagggagactaccgcttccgtgtctgcaccgtcagcgaacat
ggccggagtccccacgttgtgttcaacggttctgctcacctcgtgcccacagcccgcctg
gtgaaagggctagaggatgtgcaggtatacgatggggaagatgctgtcttctccttggat
ctctccaccatcatccagggcacctggttccttaatggggaagagctccagagtaatgag
ccggagggccaggtagagcctggggccctccggtatcgaatggaacagaaaggcctgcag
cacagactcatcctgcaggctgtcaagcatcaggacagtggggccctggttggcttcagc
tgccctggcgtacaggactcggcagccctcaccatccaagagagcccagtgcacatcctg
agtccccaggacaaagtgtcactgaccttcacaacctcggagcgggtggtgctgacctgt
gagctctcacgggtggatttcccagcaacctggtacaaggatgggcagaaagttgaggag
aacgagtcgctagtggtgaagagggatgggcacaaacaccgtctgatcctgcctgaggcc
tgtgtccaagacagcggcgagtttgaatgcagaacagaaggagtctcagcgttcttcagc
atcactgttcaagacccccccgtacatatcgtggacccccaggagcatgtatttgtacat
gccatcacctccgaatgtgtcatgctgacctgtgaggtggaccgagaggacgctcctgtg
tgctggtacaaagacgggcaggaggtggaggaaagtgacttcatggtgctggaaaatgaa
gggccccgtcaccggctggtgctgcccactgcccagccctctgatgggggcgagtttcag
tgtgttgctggagaggagcgtgcctacttcactgtcaccatcacagatgtgtcctcatgg
atcgtgtaccccagcggcaaggtgtatgtggcagctgtgcgcctggagcgcgtggtgttg
acctgtgagctgtgccgaccctgggctgaggtgcgctggaccaaggatggtgcggaggtg
gtagagagtccagcactagtcctgcagaaggaggacaccatccgccgcctggtgctgccc
gccgtccagcttgaggactccggcgagtacttatgtgaaatcgatgacgagtcagcctcc
ttcaccgtcacggtcacagagcccccagttcggatcatatacccccgggatgaggtgacc
ttgatcgccgtgagcttggagtgtgtggcgctggtgtgtgagctctcccgagaggacgcg
cctgtacgctggtacaaggatggcctggaggtggaggagagtgaggcgctggtgctggag
agcgatgggccccgccgccgcctggtgttacccgctgcccagcccgaggatgggggcgag
ttcgtgtgtgatgctggagatgactctgccttcttcacggttactgtcacagccccacca
gagaggattgtgcaccccacagcacgctccctggatctgcagttcggggctccagggcgt
gtggagttgcgctgcgaggtggccccagcagggtcccgggtgtgctggtacaaggatgga
ctagaggtagaagcatcggatgacctgcagctgggggcagtgggacccatccgcaccctc
acactgccccatgcccagcctgaggatgctggggagtatgtgtgcgagacacgcaatgag
gcagtcaccttcaacgtcagcctggctgaaaccccagtgcagttcctcgcaccagaaaca
gctcctagcccgctctgcgtggcccctggggagcccgtggtgctgtgctgtgagctgtcc
cggcctagcgcctctgtgtcctggagccacaatgggaagcccgtgcaggaaggccagggc
ctaaagctccaagccgagggaccccgccgcacgctctgcatcctggctgcagagccagcc
cacacaggcctctacacctgtcagtctggagtagctccagggtcccccagcctcagtttt
accctccaggtggctgagccccccgtgagggtggtggcccctgaggcagcccagacgagg
gttcggagtgccccaggcggggacctagagctggtggtgcacctctccaggccagggggc
cccgtgcgctggtacaaggacggggagcgcctggcgaaccaggggcgggtgcagctggag
caggccggggccaggcaggtgctacgggtgcggggggcacggagcggggacgctggggag
tacctgtgtgatgctccccaggacagccgcatcttcatcgtcagtgtggaagagccacca
ccagtgaagctggtctccgagctgacgcccctgactgtccatgagggtgatgatgccacg
ttccggtgtgaggtctcgcccccagatgcagatgtcacctggctacgcaacggggccgtt
gtcaccccagggcctcagctggagacggcccagaatggttcaagccgcacactgaccata
cgaaactgccagctagaagacgcaggggccgtgactgcccgagcagggggcacaacaaca
agtgcccggctccacgtccgagagacagagctgctgttcctgcggcggctacaggatgtg
cgggcggaggaaggccaggacgtgtgcctcgaagtggagacaggccgggtcggggctgct
ggggctgtgcgttggatgcgaggtggggagcctctgcctcatgattctcgcctgtccatg
gctcaggatggccacatccaccgcctcttcatccgtggtgtcatcctggctgaccagggc
acctacggctgtgagagccaccacgatcgtaccctggccaggctcagcgtgaggccacgg
cagctacgagcactgaggcctctggaagatgtggcagtcaacgaggggggcagcgctacc
ttccagctggaactatcccaagagggtgtgaccggggagtgggcccggggtggagtccgg
ctgcagccagggcccaagtgccaaattcacacagagggccacatacaccatctggagctc
agcggcctgggcctggcagatgggggctgcatctccttcacagctgattccctgcgctgc
gcggccagactctcagtgagagaggtcccagtgaccattgtgcgcgggccgcaggaccta
gaggtgacagagggtgacacagccacgttcgagtgcgagctttcccgagccttggctgat
attacctgggagaaggacgggggcgaactcacccccagcccccggctccggctccaggcc
ctcggcacgcgtcgccttctccagctgcggcgctgcagctcctcggacgccgggacctac
agctgtgcggtgggaacgatccgcgctgggccagtccgcctgaccgtgcgtgagcgcacg
gtgtcggtgctccgcgagctccagtcggtgcgcgcccgcgagggcgacggagccacgttc
gagtgcatggtgtcggaggctgagactcccgggcgctgggaactcggaggccgcccattg
agacccggaggacgcgtccgcatccgacaggaagggaagaaacacattctggtgctgagc
gagctgcgcgccgaggacgccggtgaagtccgcttccgagcgggacccgcccagtccttg
gcccagttggaggtggaggcattgcctctccagatgtgccgccgcccccctcgcgagaag
accgtgctggctggccgcagggcggtgttggaggtgactgtctcccgctccgggggacac
gtgagctggttatgggaaggggtcgagctgtgccagggggacaaatacgagatgcgctgc
cacggccccacccacagcctggtcatccatgatgtacagcctgaggaccagggcacctac
tgctgccaggtgggcgaggacagtgccaacacgcggctgctggtagagggtgactag
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