Dipodomys merriami (Merriam's kangaroo rat): 138823534
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Entry
138823534 CDS
T11079
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C-like
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138823534
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
138823534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
138823534
NCBI-ProteinID:
XP_069873014
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MDFPSPLRPAFFMTGPLGMSDIPDLSFMCSWRDALTLPESPLPCSKGGALHPAQDLLWEP
ALPGPVPLLPPGPDPWDPGLTARDLLFRGANPYRRQPRAVLDITEQLSHFLWDHGDVAFT
PLGKLMLENFKLEGNRSRSKKVTVVSVKNLVRDLSGHQPWGCPWAYLTHRQRRFSILGGP
VLSRTVSSLLGRLLREELALKWEQLMLDEAFTGGALAWLPGRTADTGQLVYPTGGALDRL
YLQEVSLASAGDPQVLGDPGCIQLRGPVRQVVTSTVQGETLLAVRSDYHCAVWKVGRQGR
PAPLQVVQVEKGATGVSLSPHLPGELAVCSRSGAVCLWTPQDGLQQIYKDSDTLVFRDLS
PWRWADFTAHPRVLTVGDRTGVKMIDTQAPPGCGLMLFRAGAEASCQKGERVLLVQYLGQ
TDGGSLPPTLHLVCTQFSLYLVDERLPLVPMMKWDHGLASPPLLARLLPPPGPSCPQPLL
LGGQGGQLQLLPITGDGTSPPRLAAHPQSLPSCTDSLSAFPLLEPKSHQQLQERLEAPTI
GLSATIPPPCGSTPILSVFQLSAAGDIFYQHLRLQTACSLRHEGAPGSPGPRRLPPQDHA
PTPSWDAQATAHCSRWLEALLQVPRAPRTWTAPTFSHRHLLGRLELQQSAGKTTECLRAA
MAKGRLLRRGDLGPLPAAEPPPGPQPGPQDQLTKRLGEAWEGQGAAWWGRQQDKISGPKK
QAKRAKRRTQLSSTFSQSSCTDRPDSPGGPTPSPSEATPRPPVTPPSQASLSGPWLPRAP
LERRQPLRDQVARLPPEDTPKQATVPLSQQTPGLTSSQPPRKKPRMGF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagccccctccgcccagccttcttcatgactggcccccttggcatgagt
gatatccccgacttgtcgttcatgtgcagctggagagatgccctgaccctcccggagtcc
cctctcccctgctccaagggtggggcactgcacccggcccaggacctgctgtgggagccg
gcgctgccaggacccgtccccctgctgcctcccggtcccgacccctgggaccctggcctg
acagcccgtgacctccttttccgaggcgcgaacccctatcggaggcagccccgggctgtg
ctggacattactgagcagctcagccacttcctgtgggatcatggggacgtggccttcacc
ccgctggggaagctgatgctggagaacttcaagctggagggaaaccggagccgctccaag
aaggtgacggtcgtcagcgtgaagaacctggtccgggacctcagcggacaccaaccctgg
gggtgtccctgggcttacctcacccaccggcaacgccgcttctccatcctcgggggtccc
gtcctcagcaggacggtctcgagcctgctggggcgtctgctgcgggaggagctggccctg
aagtgggagcagctgatgctggacgaggccttcaccgggggtgccttggcctggctgcct
ggcaggactgcggacaccgggcagctggtctaccccaccggaggcgccctggacaggctg
tatctccaggaggtcagtttggcttccgccggtgacccccaggtcctaggggaccctgga
tgcatccagctccggggacctgttcggcaggttgtcacctccaccgtccagggagaaacc
ctgctggctgtccgctccgactaccactgtgccgtgtggaaggtgggcaggcaggggcgg
cccgcccctttgcaggtggtccaggtggagaagggtgccaccggggtcagtctcagcccc
cacctgccgggggagctggccgtgtgcagccgctccggagccgtgtgcctctggacgccc
caggacgggctacagcagatctacaaggactcggacacgctcgtgttccgggacctctcg
ccctggcgctgggcagacttcacggcccaccctcgggtgctcaccgtgggtgaccgcacc
ggtgtgaagatgatcgacacacaggcacccccgggctgcgggctgatgcttttccgagcg
ggggcagaggcttcctgccagaaaggggaacgtgtgctgctcgtccagtacctgggccag
acggacggcgggtctctcccgcccacgctgcacctcgtctgcacccagttctccctctac
ctggtggacgagcgcctccccctggtgccgatgatgaaatgggaccacggcctggcctcc
ccgcccctgctggcccgcctgctgcctcctcctggccccagctgcccgcagcccctgctt
ctggggggccagggggggcagctgcagctgctgcccatcacaggagacgggacctccccg
cccaggctggccgcacacccgcagtccctgccctcctgcaccgactccctgtctgccttt
cccctgctggagcccaagagccatcagcagctacaagagcgcctggaagctccaactata
ggcctgtctgccaccatcccaccaccctgtggctccacgcccatcctgtcagtcttccag
ctctcggccgccggggacatcttctaccaacacctccgcctgcagacggcctgcagcctc
cgccatgagggggctccaggcagcccggggccccgccgccttccccctcaggaccatgcg
cccacaccgtcctgggacgcccaggccactgcccactgcagccggtggctggaggccctg
ctgcaggtaccccgtgcaccccgtacgtggactgcacccaccttttcccaccgccacctg
ctgggccgcctggaactgcagcagagcgcagggaagaccacggagtgcctgcgggcagcc
atggccaaggggcggctgctgcggcgcggggacctgggccccctccctgctgcagaacca
ccccccggcccccagccaggccctcaggaccagctcaccaagcgtctgggggaggcctgg
gaaggccagggtgctgcctggtgggggagacagcaggacaagatttcagggcccaagaaa
caggccaagcgggccaagcgccggactcagctgtccagcaccttctcacagagcagctgc
acagaccgcccggacagccccggcggccccaccccgagcccctcggaggccacgccacgg
cccccagtgacgccaccctcccaggcatccttgtcgggaccctggttaccccgcgccccg
ttggagcggcggcagcccctccgggaccaggtggccaggctgccacctgaggacaccccc
aaacaagccacggtgcccctctcgcagcagacgcctggcctcaccagctcccagcctccc
cggaagaagccgcgcatgggattctga
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