Dipodomys merriami (Merriam's kangaroo rat): 138823787
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Entry
138823787 CDS
T11079
Name
(RefSeq) transcription factor SOX-1-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138823787
Transcription factors [BR:
dmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138823787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138823787
NCBI-ProteinID:
XP_069873449
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MNRPNLHHDNGHGSALFSNNGSQTITNRLWSARGKASRSWGEGTEAKANKSRVKRPMNAF
MVWSRGQRRKMAQANPKMHNSEISKLLGAEWKVMSEAKKQPFVEEAKRLLALHMNEHPDY
KYRPRLKNKMFLKKEKYFLVPGLSARQGSVGSDESAVAPGLGVGAAAVDRGLENAGFVTG
GSNAHLNCWGNVSNSSSMATVAEAKAMMMQEAQLDYTQHRGAGCAHLHSHSHLAHWFSHS
YYPPSHAPNSPRVLRFDLGVQQYNPLSNLKDHIRAPFPGYSSLPYGAPDITTTAVAAEDM
HHNHNSVVAVAVAAEAASLDAQKGLRSLVTVEPSGNLPVPAHSWAPCPGDLREMISIYLP
VGEGSDPTTAALAVAQSQLNSQPLHYQDAGAVMNGTVPLMHI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccccaatttacaccacgataatggacacggatctgcactcttttctaacaat
ggctcccagaccatcaccaaccgcttgtggtctgccagaggcaaagccagccgcagctgg
ggtgaaggcacagaagcgaaggccaacaagagccgagtcaagcggcccatgaatgccttc
atggtgtggtcgcgcgggcagaggcgcaagatggcccaagcaaaccccaagatgcacaac
tcagagatcagcaagctcctgggggccgagtggaaggtcatgtctgaagccaagaagcag
cctttcgtggaggaggcaaaacggctgcttgcgctgcacatgaatgagcatccggattac
aagtaccggccccgtcttaagaacaagatgttcctcaagaaggaaaagtactttttagtc
cccgggctgtcagctcgccagggcagcgtgggcagcgacgagtcggctgtggccccaggc
ttgggtgtaggtgctgcggctgtggaccggggcctggagaacgcaggatttgtaacaggc
ggcagcaacgcgcacttaaattgctggggcaatgtctccaactcaagctcgatggcaaca
gtggccgaggccaaagcgatgatgatgcaagaggcacagctggactacacgcagcaccga
ggcgcgggctgtgcgcacctgcactctcactcacacttggctcactggttctcacactcg
tactacccgccctcgcacgcccccaactcgccgcgggttcttcgttttgacctgggcgtg
cagcaatacaaccctctctccaacctaaaggaccacataagggcgcctttcccgggctat
agcagccttccctacggtgccccagacatcacaaccactgcagtagctgcggaagacatg
caccataaccacaactcggtagtggctgttgcggtagctgcagaggccgcatcgttggac
gcccaaaaaggacttcgttcactagtgacagtggagcctagcggcaacctgcctgttcca
gcacactcgtgggcaccatgccccggggatctgcgtgagatgatcagcatatatttgccg
gtgggtgagggtagcgacccgacgactgccgcattggctgtggctcagagccagctaaac
tcccagccactgcactaccaagacgcgggtgctgtcatgaatggcacagtacccctgatg
cacatctag
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