Dipodomys merriami (Merriam's kangaroo rat): 138824274
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Entry
138824274 CDS
T11079
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138824274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138824274
Spliceosome [BR:
dmer03041
]
Complex A
Other components
Complex A specific factors
138824274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
138824274
NCBI-ProteinID:
XP_069874119
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MATGANATPLGKLGPPGLPPLPGPKGVFEPGPAPGAGLLAPGPPPPPPVGSMGALTSAFP
FAALPPPPPPPPPPPPPQQPPPPPPPPSPGTSYPPPQPSPAPPLYQRVSPSQPPPQPPRQ
DQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIE
DLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVAL
NPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRG
KGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDL
RKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGD
PQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLM
STTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNG
PPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP
PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTG
SIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAP
PPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctgggtaagctgggcccccccggcctccctccg
cttcccgggcccaaaggggtcttcgagccggggcctgcgcccggggcggggctgctggcg
cccgggccgccgccgcctccgcccgtgggctcgatgggggccctgacctcggccttcccc
ttcgcggcgttgccgccgccgccgccgccaccgccgccccccccgccgccccagcagccg
ccgccgccgcctccgccgccgtccccgggcacctcgtacccgccaccgcagccgtccccc
gcgccgccgctttaccagcgcgtgtcgccgtcgcagccgccaccccagccgccgcgtcag
gaccagcagccgggcccggccggcggcggaggagactttccaagcaagaagcggaagcgg
agccgctggaatcaagacacgatggaacagaagacagtgattccaggcatgcccacagtt
atcccccctggacttactcgggagcaagaaagagcttatatagtgcaactgcagatagaa
gacctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacagg
tccccttcccctgaacccatctacaacagcgaggggaagaggcttaatactcgagagttc
cgcactcgcaaaaaactcgaagaagaacggcacaaccttattacagagatggttgccctc
aatcctgattttaagccacctgcagattacaaacctccagcaacacgtgtgagcgataaa
gtaatgatcccccaagatgaatatccagaaatcaactttgtggggctgctcattggacct
agagggaataccctgaagaacattgagaaagagtgcaatgctaagatcatgatccgggga
aaagggtctgtgaaagaagggaaagttggacgcaaagatggccagatgttgccaggagaa
gatgagccccttcatgccctagttactgccaatacaatggagaatgtcaaaaaagcagta
gaacagatcagaaacatcctgaaacagggtattgagactccagaggaccaaaatgacctg
cggaagatgcagcttcgggagttggctcgcttgaatggcacacttcgggaggacgataac
aggatcttaagaccctggcagagctcagagacccgcagcattactaatactacagtgtgt
accaaatgtggaggagctggtcatattgcttcagattgcaagttccagaggcctggtgac
ccacagtcagctcaggataaagcaaggatggataaagaatatttgtccctcatggctgag
ctaggggaagcacctgttcctgcatctgtgggctctacctctgggcctgccaccacaccc
ttagcaagtgcacctcggcctgctgctcctgccaataacccacctcctccgtctctcatg
tccaccacccagagccgcccaccctggatgaattctggaccttcagagagtcggccctac
catggcatgcatggaggtggtcctggtgggcctggaggtggcccccacagcttcccacat
ccattgcccagcctgacaggtgggcatggtggacatcccatgcagcacaatccaaatgga
cccccacctccttggatgcagccaccaccacctccgatgaaccagggcccccacccacct
gggcaccatggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggg
gtctatcgcctgcatcaaggaaaaggtatgatgcccccgccgcctatgggcatgatgcca
ccgccgccgccgcctcccagtgggcagcccccgccccctccctctggtcctcttccccca
tggcagcagcagcagcagcagcctccgccaccccctccgcccagcagcagtatggcttcc
agtacccccttgccatggcagcaaaatacgacgactaccaccacgagcgctggcacaggg
tccatcccgccatggcaacagcagcaggcggctgccgcagcttctccaggagcccctcag
atgcaaggcaaccccactatggtgcccctgcccccaggggtccagccgcctctgccgccc
ggggcccctccccctccgccgcctccaccacctggttccgccggcatgatgtatgccccg
cccccccctcctccgcctcccatggacccttctaattttgtcaccatgatgggcatgggg
gtggcgggcatgccaccctttgggatgcctccagctcccccaccgcctccaccacagaac
tag
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