Dipodomys merriami (Merriam's kangaroo rat): 138825056
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Entry
138825056 CDS
T11079
Symbol
Copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138825056 (Copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmer04147
]
138825056 (Copb1)
Membrane trafficking [BR:
dmer04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
138825056 (Copb1)
Exosome [BR:
dmer04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138825056 (Copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
138825056
NCBI-ProteinID:
XP_069875541
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaatgtgtgttacacgttaattaacgtgccaatggattcagagcca
ccatctgaaattagcttaaaaaatgacttagaaaaaggagatgtgaagtccaagacagaa
gctttgaagaaagtaatcatcatgattctgaatggtgaaaagcttcctgggcttttgatg
accatcattcgctttgtgctacctcttcaagatcacaccatcaaaaaactacttctggta
ttttgggaaattgttcctaaaacaaccccagatgggagacttttacatgaaatgattctt
gtatgtgatgcttacagaaaggatcttcagcatcctaatgaatttattcgaggatctact
cttcgctttctttgcaaattgaaggaagcagagttgcttgaaccattaatgccagctatt
cgtgcttgtttggaacatcgacacagctatgttaggagaaacgctgttttggctatctat
actatctacagaaattttgaacatcttatacctgatgctcctgaactgatacatgatttt
ctggtgaatgagaaggatgccagttgcaaaaggaatgcatttatgatgctaattcatgcg
gatcaggatcgagctttggattatctaagtacctgtattgatcaagttcaaacatttgga
gacattctacaattagttattgttgaactgatttataaggtctgtcatgctaatccatca
gaacgggctcgttttattaggtgcatttataacctattgcagtcatctagccctgctgta
aaatatgaagctgctgggacattagtaacactttcaagtgcaccaactgccatcaaggct
gctgctcagtgttacatcgatttaattataaaggaaagtgacaacaatgtaaagctcata
gttctagaccgattagtagaattaaaagagcatcctgctcatgaaagagtcctccaggat
ctggtaatggacatcctaagagtattgaccacaccagacttagaagtacgcaagaaaact
cttcagttagcactggatcttgtgtcttctaggaatgttgaagagctggttattgtcttg
aagaaggaagtaattaaaacaaataatgtatctgagcatgaagacactgacaaatacaga
caactccttgtacgaacattgcattcctgttctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttcttagtgacaataatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaggccattcagcgttttgataacctgagaatgctgattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttatcgaggagccttatgg
atcctgggagaatattgcagtaccaaagaagacattcagagtgtgatgactgaagtccgc
aggtcccttggggagataccaattgtagaatcagaaataaagaaagaagctggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggttactgaaatgggtacc
tatgcaactcagagtgctctcagcagttctagaccaaccaagaaagaggaagacagacct
cccctgagaggattccttctggatggagatttctttgttgctgcctcccttgctacaacc
ctgactaagattgcattgcgctatgtagctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaagctatgctgctcatggcaactatccttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagaccgaatatccctgtgcctcaaggttttg
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacaatctctttct
catatgttatctgccaaacttgaagaagagaagctatctcaaaagaaagaatctgaaaag
aggaatgtgacagttcaacctgatgaccctatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagatcagtttcagctgagtttgttggcagcaatgggtaacaca
cagaggaaagaggcagcagatcctctagcatctaaacttaacaaggtcacccagttgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgttcttgttgtgaatcaaaccagcgatactttgcagaactgcacattagagtta
gctactctaggggatctgaaacttgtggaaaaaccatctcctttgactcttgctcctcat
gattttgcaaatattaaagcaaatgtcaaggtagcatcaacagaaaatggaataattttt
ggcaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggttctcagt
gatatccacattgacattatggactatatccagccagcaacttgcaccgatgctgaattc
cgtcagatgtgggccgaatttgaatgggaaaacaaagtaacagttaacaccaatatgatt
gatctaaatgactatttacagcacatactaaagtcaaccaacatgaagtgcctcactcca
gagaaggccctttctggttactgtggctttatggcagccaacctttatgctcgttccata
tttggagaggatgcacttgcaaatgtcagcattgaaaagccaattcaccaaggaccagat
gctgctgttactggccatataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaacaagtatataa
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