Dipodomys merriami (Merriam's kangaroo rat): 138825215
Help
Entry
138825215 CDS
T11079
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138825215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138825215
Spliceosome [BR:
dmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
138825215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
138825215
NCBI-ProteinID:
XP_069875705
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSSRSKRESRGSARGKRESEARGSSSRVKRERDREREPEAAGSRGSPVRVKREVKPASAR
EAPQLLPAAVPPVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLD
FDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPD
NYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYAN
AVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPH
EMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFT
KKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFN
ILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITN
VDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDI
LPQMITLSEAYIQIWKRRDNDETNQQGA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgatctaagcgggagtctcgtggttccgcccgcgggaagcgcgagtccgag
gcgcggggcagctcgagtcgtgtcaagcgggagcgagaccgggaacgggagcccgaggcg
gcaggctcccggggcagcccggtgcgcgtgaagcgcgaggtcaagccggcgagcgcgcgc
gaggcgccgcagctgctgcccgcggcggtcccgcccgtgcgggtgaagcgggagcgcgag
gccgacgaggactcggagcccgagcgggaggtgcgagcaaagaatggccgtgttgattct
gaagaccggaggagccgccactgcccatacttggatactattaacaggagtgtgctggac
tttgactttgagaagctgtgttctatttctctctcacatatcaatgcttatgcctgtctg
gtatgtgggaaatactttcaaggccgaggtttgaagtctcatgcctacatacacagcgtc
caattcagccaccatgtcttcctcaatctccataccctcaagttttattgccttccagat
aactatgagatcattgattcctccctggaggatatcacgtatgtgttgaaaccaactttc
acaaaacaacaaattgcaaacttggacaagcaagccaaattgtctcgggcgtatgatggt
actacctacctgccgggtattgtgggactgaataacataaaggccaacgattatgccaat
gctgttcttcaggctctgtcaaatgttcctcctctccgcaactacttcctggaagaagac
aattataagaacatcaagcgtcctccgggggatatcatgttcttattggttcagcgtttt
ggagaactgatgagaaagctctggaacccacgaaatttcaaggcacatgtctctccccat
gagatgcttcaagctgttgtcctttgtagcaagaagacttttcagattaccaagcaaggg
gatggagttgacttcctgtcttggtttctgaatgctctgcactcagctctggggggcaca
aagaagaaaaagaaaactattgtgactgatgttttccaggggtccatgcggatcttcact
aaaaagctcccccaccctgatttgccagcagaagaaaaagagcagctgctccataatgat
gagtaccaggagacaatggtggagtccaccttcatgtacctgacgctggaccttcctact
gccccactctacaaggatgaaaaggagcagctcattatcccccaggtgccactcttcaac
atcctggccaagttcaacggcatcactgagaaggaatataagacttacaaagagaatttt
ttgaagcgcttccaactcaccaaactgcctccatatctaatcttttgtattaagagattc
actaagaacaacttctttgtggagaagaatccaaccattgtcaacttccctatcacaaac
gtggatctgagagaatacctgtctgaagaagtacaagctgttcacaagaataccacctat
gacctcattgccaacatcgtgcatgacggcaagccctctgagggctcctaccggatccat
gtgctccaccatgggactggcaaatggtacgagttacaagacctccaggtgactgacatc
ctgcctcagatgatcacactgtcagaggcatacattcagatttggaagaggcgggataat
gatgaaaccaaccagcagggggcttga
DBGET
integrated database retrieval system
