Dipodomys merriami (Merriam's kangaroo rat): 138825972
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Entry
138825972 CDS
T11079
Symbol
Ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
138825972 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138825972 (Ercc6)
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138825972 (Ercc6)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
138825972 (Ercc6)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
138825972 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
138825972
NCBI-ProteinID:
XP_069876903
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MPYEEIPHSSQAQEQDGFQSYHVNASKETSTEPENGGNGEAEKCLPSPSSDYGLSTPAEA
CASVAGRRGPGLLHIDRHQIPAVEPSAQALELQGLGVDVYDQSVLEQGVLQQVDSAMNEA
SRATQLADAEKEYRSVLDDFMSCMKSLRQIDKIIEQLSPQAPTSRDISRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILRGAEVQVELEHASLEEDDAEPGPSCLGSMLMPAQETAWDEL
IRTGQMTPFGTQVPQKQEKKPRKIMLNEASGFEKYLADQAKLSFERKKQATNKKVARKAP
VLCESNTGPNENRPSQGSKVVSRADQRLKKHMRKLQRRALQFQGKVQLPKGKKSLEPQGG
PETEVDSEGEEYGSFPTEEMEEEEEEEEEDRTGAELSEDGTDYELKPLRRGRKRQKKVLA
QEVDDDFFPSSGEEAEATGEEGGRGGGRKEARCRDDGDEDYYKQRLRRWNKLRLQDKVKC
LKLDDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKT
IQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHMWWPPFRVAILHE
TGSYTHKKEKLVRDIAHCHGILITSYSYIRLMQDAISKYDWHYVILDEGHKIRNPNAAVT
LACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNA
SPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNF
IDSKEVYGILNGDMQIFSGLVALRKICNHPDLFSGGPKNLRGHPDEELEENQFGYWKRSG
KMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRARNYSYLKMDGSTTIASRQPLIA
KYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTV
YRLLMAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDVSQSTETS
AIFAGTGSDVKTPSRCLKRKATPAFRTDHTIPKCTKFPDSNISAKGATLTEEEPKAAGVV
TCNESGLLKGALHLGGSSSAGDSGEAGMESGPKGLPVASASGDCSDSVRVGRTPGPSGGG
STSEKEGPSFEGESCPLKTEPLWENGRVESHFHKHKSKTKHQDMAGEETPGKPMKAKCHR
DAKFEGTRIPHLVRKKRYHKQDSEQESQATEQNSDDYVLQKLFKKSVGVHSVVKHDAIVD
GASPDYVLVEAEASRVAQEALKALKLSRQRCLGAASGVPTWTGHRGTSGAPAGIKSRFGQ
KRNSKLTVQSPSSASPTQKCQDSTLKKEGKDGALEHFSGKAEEAESSSRAPASSLLLARM
RARNHLILPERLESDSGLLPETSAPLPTATEHDDLLVEMRNFIAFQAHVDGQASTQEILQ
EFESKLSTSQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgccctatgaggaaatccctcactcaagtcaagctcaggagcaagatggctttcaaagt
taccatgtcaatgctagtaaagaaacatcaactgagccagaaaatggtgggaatggggag
gcagagaagtgccttccctctccttcctctgactatggtctgtccaccccagctgaggcc
tgtgcatcagtggctgggaggagagggcctggcctgctgcatatcgacaggcatcagatt
ccagcagtggagcctagtgcgcaggccctggagttgcagggcctgggagtggatgtctat
gaccagtccgtgttagagcagggtgtgcttcagcaggtggacagtgccatgaatgaggcc
agtcgtgccacccagcttgctgatgctgaaaaggagtaccggtcggtcctagatgacttc
atgtcatgtatgaagtccttaaggcagatcgataaaattattgaacaacttagtcctcag
gctcccaccagcagagacatcagcaggaaactagattctgtaaaacggcagaagtataat
aaggaacagcagctgaagaagataactgcaaagcagaaacgtctccaggccatcctgaga
ggagcagaggtacaagtggagttggagcatgctagcctggaggaggatgatgcagagccg
ggaccatcctgtttgggcagtatgctcatgcctgctcaggaaactgcatgggatgagctc
atccgcactggtcagatgacaccatttggaacccaggtccctcagaaacaggagaaaaaa
cctagaaaaataatgctcaatgaggcgtcgggcttcgaaaaatatctggcagatcaagca
aaattgtcttttgaaaggaagaagcaagctactaataagaaagtagccagaaaagccccg
gtcctctgtgagtctaacacaggaccaaatgaaaacagaccaagccagggaagcaaagtt
gtctcaagagcagaccaacgcttgaagaagcacatgaggaagctgcagagaagggcactg
cagttccagggcaaagtgcagttgccaaaggggaagaagtccctggagccccagggaggg
ccagagacagaggtagactctgagggtgaggagtatggctccttccccacagaggagatg
gaggaggaagaagaggaggaagaagaagacaggacaggggctgagctttctgaagatggc
acagattatgaactgaaacctctacgcaggggccgaaaacgccagaaaaaagtccttgca
caggaagttgatgatgactttttcccaagttcgggggaagaagctgaagccacaggggag
gaaggaggaagaggaggaggtcgcaaagaagcgaggtgccgagatgatggagatgaagat
tattacaagcagcggttaaggaggtggaataaactgagactgcaagacaaagtgaaatgc
ctaaagctggatgatgattctgaggaaagcgatgctgaatttgatgaaggctttaaagtg
ccgggttttctgttcaaaaagctctttaagtaccagcagacaggtgttaggtggctgtgg
gaattgcactgccagcaggcaggaggaattctgggagatgaaatgggattgggcaagacc
atccagataattgccttcttggcaggtctgagctacagcaagatcaggactcgtggttca
aattacaggttcgaggggttgggccccaccgtaattgtctgtccaacaacagtgatgcat
caatgggtgaaagaattccacatgtggtggcctccattcagagtggcaattctgcatgaa
accggctcctacactcacaaaaaggagaagctagttcgagatattgctcattgccatgga
attttgatcacttcttactcctacattcgactaatgcaagatgccattagcaagtatgac
tggcactatgtgatcttagatgaaggacacaaaattcgaaacccaaatgctgctgtcacc
ctcgcttgcaaacagttccgtacaccccatcggatcattctgtctggctcaccaatgcag
aataaccttcgagagctatggtcgctctttgactttgttttccctggcaagttgggcacg
ctgcctgtgttcatggaacagttctctgttcccatcacaatgggaggatattccaatgca
tctcctgtccaggttaagactgcctataagtgtgcatgtgtcttacgggacactataaac
ccatacctgctgaggagaatgaagtcagatgtcaagatgagcctttctttacctgataaa
aatgaacaggtcttattttgccgtcttactgatgagcaacatgaagtctaccagaatttc
attgactccaaagaagtttatgggattctcaatggagacatgcagattttctctggactt
gtagccctaagaaaaatctgcaaccaccctgatctcttttctggaggtcccaagaatctc
agaggtcatccagatgaggaactagaagaaaatcagtttggatactggaaacgttctggg
aaaatgattgtggttgagtctttattgaaaatatggcacaagcagggtcagcgagtgctg
ctgttttctcagtcaaggcagatgttacacatccttgaagtgttcctgagagcccggaat
tactcctatctcaaaatggatgggagtaccaccatagcttcacggcagcctctgattgca
aaatataatgaggatacatccatctttgtgtttcttctgaccacgagggtgggtggcctg
ggagtcaacctgaccggggccaacagagtcatcatctacgaccctgactggaaccctagc
acggacacacaggcccgggagcgagcgtggaggataggccagaagaagcaggtgactgtg
tacaggcttctgatggccggaaccattgaggaaaagatctaccaccgacaaatcttcaag
caatttctgacaaaccgagtgctaaaagacccaaaacaaaggcggtttttcaaatccaat
gatctttatgagctgtttactctgactagccccgatgtaagccagagcaccgaaacaagt
gcaatttttgcaggaactggatcagatgtgaagacaccctctcgctgtttaaaaagaaag
gccacaccagcctttcgaacagaccacaccattccaaaatgcaccaagtttccagattct
aacatatctgccaagggggccacactgactgaggaggagcctaaggccgcaggagtagta
acatgtaacgagagcggccttttgaaaggcgccctgcacctgggtggcagtagcagtgct
ggggacagtggagaggcaggcatggagtctggacccaaggggctgccagtggccagtgca
agcggtgactgctcagattctgtcagagttggcaggacacccgggccctctggtggggga
agtacttccgagaaggaagggccatcctttgaaggagagagttgtccgctgaagacagaa
cctctttgggagaacggacgagtggaaagtcattttcataagcataaatcaaaaacaaaa
catcaagatatggcaggtgaagagacaccagggaaacccatgaaggcaaagtgccataga
gatgccaaatttgagggaactcgcattccacatctggtgaggaaaaaacggtaccacaag
caagactctgaacaggaaagtcaggccacagaacaaaacagcgatgattatgttttacaa
aagcttttcaaaaagtcagtgggcgtgcacagcgtggtgaagcacgatgccattgtggat
ggggccagcccagactatgtgctggtggaggcggaagccagccgagtggcccaagaggcc
ctgaaagccctgaagctctcacgtcagcggtgtctgggggctgcatctggtgttcctacc
tggaccggccacagggggacttctggtgcacctgcaggaataaagagcagatttggtcag
aaaaggaactctaagttaactgtgcagtctccttcttcagcatctccaacacaaaaatgc
caggacagcacattgaagaaggaggggaaagatggtgccttggagcacttcagtggcaaa
gcagaagaggcagagtcttcctccagggcccctgcttcttccttactcttggccaggatg
agagcaagaaaccatctgattctgccagagcgcttagagagtgacagtggactccttcca
gagacttctgccccactgcctactgccacagaacacgacgacctactggtagagatgagg
aacttcattgcttttcaggctcatgtggacggccaggctagcactcaagagatactgcaa
gagttcgaatccaagctgtccacctcacagtcttgtgtcttccgagagctattgagaaat
ctgtgcacttttcatagaacttctggtggagaagggatttggaaactgaagccggagtac
tgctga
DBGET
integrated database retrieval system
