Dipodomys merriami (Merriam's kangaroo rat): 138826180
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Entry
138826180 CDS
T11079
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138826180
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
90S particles
Other 90S particles
138826180
Pre-60S particles
Other pre-60S particles
138826180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
138826180
NCBI-ProteinID:
XP_069877429
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPSICRHRQAARSRFFSRPAGKSDLTVDAVKLHN
ELQSGSLRLGKRADPETPMEEDPELAVTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVTYLLNLVLKRVPS
PVLIKKFSDTSKAFMDIMSAQASSGSTSALRWVLSCLATLLRKQDLEAWGYPLTLQVYHG
LQSFTVHAKPKIRKAAQHGVCSVLKGSDFMFGEKVPAHHPAAVSTAKFCIQEIEKAGGSK
EATTMLHMLTLLKDVLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHNLFHAKPSL
GTLSAELNAQIITALYDYIPSENDLQPLLAWLKVMEKAHINLVRLQRDLGLGHLARFFGT
AMTCLLSPHSPVVIAATQSLKEILKECVAPHMADIGAVTFSASGPAQYIAKMFRAVEEGL
TYKFHASWSFVLQLLCVFFEVCGRQAHPVMKKCLQSLCDLRLSPHFPHTAALDQAVGAAV
TSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLAFFTTYFLPLANTLKSK
AMDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVAASFKGLARTLGTAISERPDLRV
TVCQALRTLITKGCERDADRAEVSRFAKNFLPILFNLYGQPVAEEDTPAPRRAVLETIKT
YLTITESQLVNGFLEKASEKVLDPASSDFTRLSVLDLVVALAPHADEAAISQLYSTIRPY
LESKAHGVQKKAYRVLEEVCASPQGPGAQFVQNHLDDLKKTLLDSLRSTSSPAKRPRLKC
LIHIVKKLSAEHEEFIAALVPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGPNQEEAL
QRYLILIYPGLVGAVTMVSCSILALTHLLFEFKGLMGSSTVEQLLENVCLLLASRTRDVV
KSALGFIKVAVVVMDVVHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFEL
VKGLLPEEYHKVLVNIRKAETRAKKHRALNQAAMEEEEEEEEEEQLAQGKGDSIEEILAD
SEDEEDNEKAERSWDKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPDRG
KKKDHGFKVSADGRLIIREEEEGDKVEEEEGTKGEEDEMASLMEEVVIKKKKLKWQNEAE
DEELEMPPQYQAGGTGIHRPMAKKTTPGAEYKAKKAKGDVKKKGRLDPYAYIPLNRTKLN
RRKKVKLQGQFKGLVKAAQRGSQVGHKLRKKDRRP
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctccgggaagctgccctccggggtgtcggccaagttgaagcgctggaagaaa
ggccacagcagcgacagcaaccccagcatttgccgccaccgccaggccgctcgcagccgc
tttttcagccggcccgcagggaagagcgacctgacggttgacgccgtgaagttgcacaat
gagctgcaatcggggtccctgcggctgggcaagcgcgcagaccctgagacgcccatggaa
gaagacccggagctggccgtcaccgagaagtcctcaggcacgttcctgagtggcctgtcg
gactgcacaaacgtcaccttcagcaaagtgcagcgcttctgggagtctaactctgccgcc
cacaaggagatttgtgctgttcttgctgctgttacagaggtgattcgctcccagggaggg
aaagagactgagactgagtactttgctgctctgatgactacaatggaagcagtggagtcc
ccagagtctctggctgctgtcacttacctattgaatcttgtcctgaagcgagtgcccagc
cctgtgctcattaaaaagttctcagatacctccaaagccttcatggacatcatgtctgcc
caggccagcagtggctccacctctgccctccgatgggtcctgtcctgcctggctaccctc
ctgcggaagcaagacctggaggcctgggggtatcccctgacccttcaggtataccatggg
ctgcagagcttcaccgtgcatgccaagcccaagattcggaaggctgcccagcatggagta
tgctcagttctcaagggcagtgacttcatgtttggtgaaaaggtccctgctcatcatcct
gctgctgtctccaccgccaagttctgcatccaggagattgagaaggctggaggctccaag
gaggctaccaccatgctacacatgctgacactgctaaaggacgtgctaccctgcttccct
gaaggcctggtgaagagttgcagtgagactctcctacgcgtcatgaccttgagccatgtg
ctggtgactgcctgtgccatgcaggccttccacaatctcttccatgccaaacctagcttg
ggcaccctatcagcagagctcaacgcccagattatcacggccttatatgactacattccc
agtgaaaatgatctacaacccctattggcctggctaaaggtcatggagaaagcccatatc
aacctggtcaggttgcagcgggacctggggctgggccaccttgctcgattttttggaaca
gcgatgacttgtctcctctcccctcactctccagtggtaatagctgccacccagagcctc
aaggagatcttaaaggaatgtgtggctccacacatggctgacatcggtgctgtaaccttc
tcagcctcaggtcccgcccagtacatcgccaagatgttcagggcagtggaggagggcctg
acgtataaattccacgcatcctggagctttgtgctgcagttactgtgtgtcttctttgag
gtgtgtgggaggcaagctcatcctgtgatgaagaagtgcctccagtccctgtgcgacctg
cgcctctcccctcacttcccccacacagcagccctggaccaggcagtgggggctgcagtg
accagcatgggacctgaggtggtgttacaggctgtgcctttggagattgatggctctgaa
gagactctggatttcccccggagctggctgctgcctgtcatccgggaccatgtacgggaa
acacggcttgctttcttcaccacctacttcttgccgctggctaacaccctgaagagtaaa
gcaatggaccttgcccaggcaggcagcacagtggagtccaagatctatgacacattacag
tggcagatctggacccttctgcctgggttctgcacaaggcctactgatgtggctgcctcc
ttcaaaggtctggcacggacattgggcacagctatcagcgagcgcccagacctgagagtc
actgtgtgccaagccctgcgcaccctcatcaccaagggctgtgagagagatgctgaccgt
gctgaagtgagccgctttgccaagaactttctgccaatcctcttcaacctatatgggcag
cctgttgcagaggaggacactccagcccctcgtcgggctgtactggaaaccatcaaaact
taccttaccatcacagagtctcagttggtgaatggtttcctggaaaaagccagtgagaag
gtgcttgaccctgccagctctgattttaccagattgtctgtcctggatctggttgtagcc
ttggctcctcatgctgatgaagctgccatcagccagctatactccaccatccggccctat
ttagagagcaaggcccatggggtacagaagaaggcttaccgagtgctggaggaggtgtgt
gccagccctcagggccctggggctcagtttgtgcagaaccacctagatgacctgaagaag
acccttctggactctttgcggagcacgtcctcacctgctaaaaggccccgtttgaagtgc
ctcatacatattgtgaagaagctgtcagctgagcacgaggagttcattgctgccctcgtc
ccagaggtgattctgtgcaccaaggaggtgtcggtgggtgctcggaagaatgcttttgcc
ctgctggtggagatgggccatgctttcctgaggtttggccccaaccaagaagaggctctg
cagcgctacctcatccttatctatcctggccttgtgggtgcagtgaccatggtgagctgt
agcatcttggccttgacccacctcctgtttgagtttaaaggactaatggggtctagcaca
gtggagcagctactagaaaatgtgtgcctgctgctggcctcccgcacccgagacgtggtc
aaatctgcactgggcttcatcaaggtggctgtggtggtcatggacgtggtgcacctggcc
aagcatgtgcagctggtgatggaagccattgggaaactgtcagatgatatgcgtcggcac
ttccgtatgaaacttcggaacctgttcaccaaattcatccgcaagtttggatttgagctg
gtgaaggggctgctacctgaggagtatcacaaggtcttggtcaacatccggaaagctgag
acccgggccaagaagcaccgagctttgaaccaggctgccatggaggaggaagaagaagag
gaagaggaggaacagcttgcccagggcaaaggcgacagcattgaggagattttggctgac
tctgaggatgaggaggacaatgagaaagcggaaagaagctgggacaaggagcaacggaag
ctggcacgacagaggagccgggcctggttgaaggaggggggtggggacgagcctctcaac
tttctggatcccaaggtggcccagcgcgtcctcgccacacagcctgggccagaccggggc
aagaagaaggatcatggcttcaaggtgagcgctgatggccggctgatcatacgagaggag
gaagaaggtgacaaggtggaggaagaggaaggcactaaaggagaggaagatgagatggcc
agtctgatggaagaggtggtcatcaaaaaaaagaagcttaagtggcagaatgaagctgag
gatgaggagttggaaatgcccccccagtatcaagctggaggcactggcatccaccgcccc
atggccaagaagaccacacctggggccgaatacaaggccaagaaagcaaagggtgatgtg
aagaagaagggtcggcttgatccctatgcctacatcccactcaacagaaccaagctcaac
cgcaggaagaaagtgaagctgcagggacagttcaaaggtctagtgaaagctgcccagaga
gggtcccaggtgggacacaaacttcgcaagaaggaccgtcggccctga
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