Dipodomys merriami (Merriam's kangaroo rat): 138826495
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Entry
138826495 CDS
T11079
Symbol
Scn9a
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
138826495 (Scn9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmer04040
]
138826495 (Scn9a)
Ion channels [BR:
dmer04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138826495 (Scn9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
DUF6739
Motif
Other DBs
NCBI-GeneID:
138826495
NCBI-ProteinID:
XP_069877756
LinkDB
All DBs
Position
Unknown
AA seq
1988 aa
AA seq
DB search
MAMLPPPGPQSFVRFTKQSLALIEQRIAEERAKEPKEEKKDDEEEAPKPSSDLEAGKQLP
FIYGDIPPGMVSLPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFNPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPLEWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRNNLENNETLESILNRTESEDELK
KYFYYLEGSKDALLCGFSTDSGQCPEGYSCVKAGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
IEFQQMLDRLKKEQEEAEAIAVAAAEYTSIGRSRIMGLSESSSETSKLSSKSAKERRNRR
KKKNQKKLSSGEEKGDEEKLSKSGSEESIRRKSFHLGVESHKRAREKRLSTPNQSPLSIP
GSLFSARRSSRTSLFSFKGRGKEIGSETEFADDEHSIFGDNESRRGSLFVPHRPWERRSS
NISQASRSPPMLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDESGT
SNQIRKKRRSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHT
FLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLTVGN
LVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSIIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
EDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKQTLREFILKAFSKKPKI
SKEIIRTENLNNKKENYISNRTLAEMSKDYHFHNEKERLSGYGSSMDKTLMEESDYQSFI
HNPSLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERRNRSSSSECSTVDNPLPGEGEE
AEAEPVNSDEPEACFTDGCVRRFPCCQVNIDSGKGKIWWNIRKTCYRIVEHSWFESFIVL
MILLSSGALAFEDIYIEKKKTIKTILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCW
LDFLIVDVSLVTLVASTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGTRFSTSQVENRSECFALMNGSANV
RWKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDEQPKYEYNLYMYIYFVIF
IIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRP
GNKFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQSENMTYVLYWINLVFIILFTG
ECVLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRI
LRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFN
FETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYF
VSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFERFYEIWEKFDPDATQFIEYS
KLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLR
SQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRSYRRYRLRKNVKNISSIYIKDG
DKDDDLPNKEDIVFANVNENSSPEKTDATPSTISPPSYDSVTKPDKEKYETDKTEKEDKG
KDGKENTQ
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagcttcgtccgcttcaccaaacagtctctt
gccctcattgaacaacgcattgctgaagaaagagcaaaggaacccaaagaagaaaagaaa
gatgacgaggaagaagccccaaagcctagcagtgacttggaagctggaaagcagctgccg
ttcatctatggagacattcctcctggcatggtgtcgctgcccctggaagacctggaccca
tactacgcagacaaaaagacttttatagtattgaacaaagggaaggcaatcttccgcttc
aatgccacacctgctttgtatatgctgtctcccttcaaccctctaagaagaatatctatt
aagattttagtacattctctgttcagcatgcttatcatgtgcactattctgaccaactgc
atttttatgaccatgagtaaccctctggaatggaccaaaaatgtagagtacacttttact
ggaatatatacttttgaatcacttgtaaaaatacttgcaagaggcttctgtgtaggagaa
ttcactttcctgcgtgacccatggaactggctggattttgtcgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaatcccaggcctgaagactattgtgggggccctcatccag
tcggtgaagaagctctccgacgtcatgatcctcactgtgttctgtctgagcgtgtttgct
ctcattgggctgcagctctttatgggcaacttgaagcataaatgtttccggaataacctt
gaaaataatgaaacactggaaagcatattgaatcgtacagagagtgaagatgaactaaaa
aaatatttttattacctggagggatccaaagatgctctcctttgtggtttcagcacggat
tcaggtcagtgtccagagggctactcttgtgtcaaggctggaagaaaccctgattatggc
tacaccagctttgacactttcagctgggccttcttagccttgtttcggctgatgactcag
gattactgggaaaacctttaccaacagacactgcgtgctgctggcaaaacctacatgatc
ttctttgttgtggtcattttcctgggttccttttacctgatcaacttgatcctggctgtg
gtggccatggcctatgaagagcagaatcaagccaacattgaagaagctaaacagaaagag
atagaatttcagcagatgttagatcgactcaaaaaagaacaagaagaagctgaggcaata
gcagtagcagctgctgaatacacaagtattggacgaagcagaatcatgggcctctcagag
agttcttctgaaacatccaaactgagttcaaagagtgctaaggaaagaagaaacagaaga
aagaaaaagaatcaaaagaaactctccagtggggaggaaaagggagatgaggagaagttg
tccaaatccggatcagaagagagcatcagaaggaaaagcttccacctgggtgttgaaagt
cataaacgagcacgagagaagagactgtccacccctaatcagtcaccactcagcatccct
ggttccttgttttctgcaaggcgcagcagccgaacaagtcttttcagcttcaaggggaga
ggaaaagagataggatctgagacagaatttgccgatgatgagcacagcatttttggagac
aatgagagcagacggggttcactgtttgtgcctcacagaccctgggaacggcgcagcagt
aacatcagccaggccagtaggtcccccccaatgctgccagtgaacgggaagatgcacagt
gccgtggactgcaatggtgtggtgtctctggttgatggaccctcagccctcatgctcccc
aatggacagcttcttccagaggtgataatagataaggcaacttctgatgagagcggcaca
agtaatcaaataagaaaaaaaagacggtctagttcttatttcctgtcagaggatatgctg
aatgatccccacctcagacaaagagcaatgagtagagcaagcatattaacaaacactgtg
gaagaacttgaagagtccagacaaaaatgcccaccctggtggtacagatttgcacacacc
tttttgatctggaattgctccccatattggataaaattcaaaaagtttatttattttatt
gtaatggatccttttgtagaccttgcaattaccatttgtatagttctaaacacattattt
atggctatggaacaccacccaatgactgaagaattcaaaaatgttcttactgtgggaaat
ttggtctttactggcatctttgcagctgaaatggttttgaaattaatcgccatggatcct
tatgaatatttccaagtaggctggaatatttttgacagcattattgtgactttgagttta
gtggagctttttctagctgatgtggagggattgtcagttctgcgatcattcagactgctc
agggtattcaagttggcaaaatcatggcccacactgaacatgctaataaagatcatcggc
aactccgtgggggcgctgggaaacctcaccttggtgttggccatcatcgtcttcatcttt
gcggtggtcggcatgcagctcttcggtaagagctacaaagaatgcgtctgcaagatcaac
gaggactgcacgctgccccgctggcacatgaacgacttcttccactccttcctcatcgtg
ttccgcgtgctgtgtggggagtggattgaaaccatgtgggactgcatggaggtggctggc
cagaccatgtgccttattgtttacatgatggtcatggtgattggaaacctcgtggtcttg
aatctgtttctagcattattattgagttcatttagttcagacaatcttacagcaattgaa
gaagacactgatgcaaataatcttcagattgcagtggccagaattaaaaggggaataaat
tatgtgaaacagacgttacgggaatttattctaaaggcattttctaaaaagcccaagatt
tccaaggagataatacgaacagaaaatctaaataataaaaaagaaaactatatctcaaac
cgcacacttgctgaaatgagcaaagattaccattttcacaatgaaaaagagagactcagt
ggttatggaagcagtatggacaaaaccttgatggaagaaagtgattatcaatcatttatt
cataatccaagcctcacagtcacagtgccaatcgcccctggggaatctgacttggaaaat
atgaatactgaggaacttagcagtgattcagatagtgactacagcaaagagagacggaac
cgatcaagctcttctgagtgcagcacagttgataaccctctgccaggagaaggagaagaa
gcggaggctgaacctgtgaattccgatgaaccagaagcctgctttacagatggttgtgta
cggagattcccatgctgccaagttaacatagactcaggaaaagggaaaatctggtggaac
atccgaaaaacctgctacaggatagtagaacacagttggtttgaaagcttcattgttctc
atgatcctgctcagcagtggagctctggcttttgaagatatctatattgaaaagaaaaag
actattaagactatcctggaatatgctgacaaaatattcacttacatcttcattctggaa
atgcttctcaagtgggtggcatatggttataaaacctatttcaccaatgcctggtgttgg
ctggacttcttaattgttgatgtttctttggttactttagtcgcaagcactctgggctac
tcagatcttggccctattaaatcccttcggacactgagagctttgagacctctgagagcc
ctatctagatttgaaggaatgagggtggttgtaaatgctctgataggagcaattccttcc
atcatgaatgtacttctcgtatgtctgatattctggctaatatttagcatcatgggagta
aatttgtttgctggcaagttctacgagtgtgtaaataccacagatgggacaagattttct
acaagtcaagttgaaaatcgttcagagtgctttgcccttatgaatggcagtgcaaatgta
cgatggaaaaacctgaaggttaactttgataatgttggacttggttacctgtctctactt
caagtggcaacttttaagggatggatggacattatgtatgcagctgtggattctgttaat
gtggatgagcagcccaagtatgaatacaacctctacatgtacatttattttgtcatcttt
atcatcttcggctcattcttcactttgaacttattcattggtgtcatcatagataatttc
aaccaacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaa
tactacaatgcaatgaaaaagctgggatccaagaaaccacaaaagcccattcctcggcca
gggaacaaattccaaggatgcatatttgacctagtaaccaaccaagcttttgatattacc
atcatggttcttatctgcctcaatatggtaaccatgatggtagagaaggagggccaaagt
gaaaacatgacgtatgttttgtactggataaatctggttttcatcatcctcttcactggg
gagtgtgtactgaagctgatctccctcagacattactacttcacagttgggtggaacatt
tttgatttcgtggttgtgatcctctccattgtaggtatgtttctggcagatctaatagaa
aaatacttcgtgtcccccaccctgttccgagtgatccgccttgcccggattggccgaatc
cttcgtctcatcaaaggggccaaggggatccgcacgctgctcttcgctctgatgatgtcc
cttcctgccttgttcaacatcggcctcctgctcttccttgtcatgttcatctacgccatc
ttcgggatgtccaacttcgcctacgtgaagaaggaagctggaatcaatgacatgttcaac
tttgagacgtttggcaacagcatgatttgcctgttccaaattaccacgtctgcgggctgg
gatgggttgctagccccgattcttaatagtgcacccccagactgtgatcccaaaaaagtt
cacccaggaagctcagtagaaggagactgcgggaacccatccgttgggattttctatttc
gtcagctacatcatcatctccttcctggtggtggtgaacatgtacatcgctgtcatcctg
gagaacttcagcgtggccacggaagaaagcacagagcccctgagcgaggatgacttcgag
cgattctatgagatttgggagaagttcgatcccgatgcgacccagttcatagaatacagc
aaactctctgattttgcagctgccctggatcctccccttctcatagcaaaacccaacaaa
gtccagctcattgccatggacctgcccatggtgagtggagaccggatccactgcctcgac
atcttgtttgcttttacaaagcgtgttttgggggagagtggagagatggattctcttcgc
tcacagatggaagagaggtttatgtctgccaatccttccaaagtgtcctatgaacccatc
acgactacattaaagcgaaagcaagaggacgtgtcggccactgtcattcagcgttcttat
cgacgctaccgcttacggaaaaatgtcaaaaacatctccagtatatacataaaagatggt
gacaaagatgatgatttacccaataaagaagacatcgtttttgctaatgttaatgagaac
tccagtccagaaaaaaccgatgcaaccccatccaccatctctccgccttcctacgatagt
gtaacaaaaccagacaaagaaaaatatgaaaccgacaaaacagaaaaagaagacaaaggg
aaagatggaaaggaaaacacacaatag
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integrated database retrieval system
